Eptesicus fuscus (big brown bat): 103286516
Help
Entry
103286516 CDS
T09083
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
efus
Eptesicus fuscus (big brown bat)
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efus04131
]
103286516 (VPS13A)
Membrane trafficking [BR:
efus04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
103286516 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
Mannitol_dh
RRM_fung
Motif
Other DBs
NCBI-GeneID:
103286516
NCBI-ProteinID:
XP_008140283
LinkDB
All DBs
Position
15:41145291..41365660
Genome browser
AA seq
3172 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVVLKNLEIKENALSQLDVPFKIKVG
YIGNLNLKIPWKNLYTQPVVAVLENIYLLIVPSSIIKYDSLKEEKQLLEAKQQELKRIEE
AKQKVADQEKLLVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDITNQENPLSFGISLQ
NLSMQTTDHNWVPCLHDETEKLFRKLIRLDNLFAYWNVKSRMFYLTSYDDSLDSLRNGIV
DENIVPEGYDFVFRPISAKAKLQMNRRSDFDFSAPKIKLDVELHDIAIEFNKPQYFSLME
LLESVDMMTQNLPYRKFKPDVPVHGHAREWWAYAIHGILEVNVCPHLRMWSWKHISDHRQ
QMKQYKELYKKKLINKKPAVELLSCLEELEKTLDVFNITIVRQQAEVEVKKAGYRIYKEG
TKDSEENKGWFNWLWTWSEPKTKEQQPDVKPGSLEEILTPEEKTLLYEAIGYSETAVDPT
LPKSFEAMKLYMHLKSMSIVLREEQRKRELLNIVVEEFSTWVVQRPGAQAMKFETKIDSF
HVTGLPDNSTKPRLLSSLDNTASLFQITFETNPLDETVAQRCIIEAEPLEIIYDARTVNS
IVEFFRPPKEVNLAQLTSATLTKLEEFRDKTATGLLYIIETQKVLDLRINLKASYVIIPQ
DGIFSPTSNLLLLDLGHLKVTSKSRSQLPDMKQGGARLEEIMRRAYDSFDIHLTSIQLLY
SRVGDNWKEARKLNVSTQHVLVPLHFNVEFSKAMVFMDIRMPKFKIFGKLPLISLRISDK
KLQGILELIESIPKPTPATEVHAPVKPFQMQRSTSLGAPQISQKVIPLLELAGVEYESEE
EFYDAPCSPVEEYFQSTASVKSYQQNKLPELDCSKNMIQYKIRFEVPEVSVQFYHLVEDC
ELPVVEIVVLGLGTEVELRTFDLKANAFLKEFCLKCPEYLDVNEKPVYLITTLDNTMEDL
LTLEYVKAEKNVPNLKSAYNNVEQLIKVNFSSLDIHLHTEALLNTINYFNNFLPQLEEKS
ASVHVAETEDKGEVIKKIASRRYRHEDITLQILAELSCLRIFIQDQKHNIAEIKIEGLDS
EIIMRPSVTEVNAKLRNIIVLDSDITAVYKKAVYITGKEVFSFKILSYVNATADSAYTDM
SVVDIQVNLTVGCIEVVLVTKFLHSILAFIDNFQAVKEALAEATVQAAGMAATGVKELAQ
RSSRMALDVNIKAPVVVIPQSSISENVLVADFGLITMTNTFHMITESQSNPPPIIDLITI
KLSEMRLYRSQYSNDAYQEVLDILLPLNLEVIVERNLAWEWFQEVPCFNINAQLKPMEFI
LSQEDITTIFKTLYGNIWYEGGGSVPPAGVKDQSSVTSGVPNASHHSGGTTVVTAAVVEV
HSCAAQVKTTLNMSFRTDYLTMILYSPGPEQASFTDVRDPSLTLAEFKLENIISTLKMYT
DDSVFSAFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYKKIRDGWMSDVVLQ
ETYICASVEFLLTVANVFLEAYTTGTAVETNVQAWATKEEVPAQVQEKWEVNILIKNPEI
VFVADMTRNDAPALVITTQCGICWKGDLENNTMTAAIKDLQMRACPFLPDKRKDRITTVL
QPCDLFYQATQIGRDPQVIDISLKSLTLKVSPVIINTVITITAALYTTKETIPQETASST
AHLWEKKDTKTLKMWFLEEPNEVKNIAPTTELVPKGEIIKMNIDSIFIVLEAGVGHRTVP
MLLAKSCFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEEFRPWNLG
IKMKKKAKKAIVESDTEEEHYRVPEYKTVISFYSKDQLNITLSKCGLVMLNNLVKAFTEA
ASGSSTVFMRDLAPFMIFNSLGLTISVSPSDSFSVLNVPVAKSYILKNEESLSMDYVRTK
DNDHFNAMTSLSSKLFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQIDA
VEGNKKVTVRSPVQIRNHFSIPLCVYERNTLLGMASPGNEFNIPLASYRSFLFLKPEDED
YQMCEAIDFEEIIKNEGTFLKRKCKPINPSKKPFIINVVPEKDNLTSLSVYSEDGWDLPY
IMHLWPPILLRNLLPYKIVYYIEGNEHRVFTLNEGSSAHICTVQLDKAILHLKLLDYLNQ
DWKSEYHIKPNQQDISFINFTCVTEMEKTDLDIAIHVTYNPGQTVVAFHSPYWMVNKTGR
MLQYKADGIHRKHPPNYKMPVLFSFQPKHFFNNNKVQLMVTDSDLSDQFSIDTVGSHGAV
KCKGMKMEYQVGVIIDLSSFNITRIVTFTPFYMIKNKSKYRISVAEEGSDKWLSLDLEQC
IPFWPEDASNKLLIQVERSRGPPKKIHFNKQENCILLRLDNELGGIIAEVNLAEHSTVIT
FSDYHDGAATFLLINHTKNDTIEYKQSSLSEIEDSLPPGKAVLYTWADPVGSRKLKWSCG
KNHGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPKVFKVTYENEKAELAEQE
IVLALQDVGLSLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSIKHTEKLEKEFKE
YTESSPSEDKVIELDTNIPVRFTPSGNNMKILQPHIIAIRRNYLPALNVEYNTSAHQSSF
RIQIYRIQIQNQIHGAVFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKY
FKVLIQEMDLRLDLGFVYALAELMTEAEVTEKTEVELFHKDIEVFQEEYKTVSLVDSSQV
SLYEYFHISPIKLHLSVSLSSGKEAAKDSEQHEGFIAISSLNLLLKSIGATLTDVQDVVF
KLAFFELNYQFHTTSELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAF
FYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAITMDEDYQQ
KRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLV
GAVARPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQML
QVIENGRFAKYKYFTHVMINKTDMLMITRSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFI
VHGRRLRIEAKERVKSVFHAKEFGKIINFKTAEDARWILTKLEEAREPSPTL
NT seq
9519 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggatgtgttgaaccggttcttgggggactacgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtggtcttgaagaac
cttgaaattaaagaaaatgccctgagtcaactggatgtaccatttaaaattaaagttggt
tatataggtaatcttaatcttaaaattccatggaaaaatctttatactcagccagttgta
gctgtactggaaaatatttatttactcatagtgccttcttcaataataaaatatgattct
ttaaaagaagaaaagcaacttttggaagcaaagcaacaggaactaaaaagaatagaagaa
gccaaacaaaaagtagctgatcaagaaaaactcctggtggagaaacaagacacttttaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgttatgaagatgatatcacaaatcaagaaaacccactgtcatttggcatttctcttcaa
aatctcagcatgcagacaactgatcataactgggttccatgtttacatgatgaaactgag
aaactatttcgtaagttaatccgattggataacctttttgcttattggaatgtgaagtcc
cggatgttttatcttactagttatgatgattcattggacagcttgaggaatggcattgtt
gatgaaaatattgttccagaaggttatgattttgtatttcgccccatatctgctaaagcc
aaacttcagatgaatcgccgatctgattttgacttttccgcccccaagataaaactggat
gttgaattacatgacatagcgattgaatttaataaaccacagtatttcagtcttatggag
cttcttgaatcagttgatatgatgacgcaaaatctgccatataggaaattcaaacctgat
gtacctgttcacggccatgccagagaatggtgggcttatgctatacatggtattcttgaa
gtaaatgtttgcccccacttacggatgtggtcatggaaacatattagcgatcatcggcaa
caaatgaagcaatataaagaactctataagaaaaaactaataaataagaagccagctgtt
gaacttctcagctgtttggaggagttggagaagactctggatgtatttaatataactata
gtgagacaacaggcagaagttgaggtaaaaaaagctgggtacaggatatacaaagaagga
acaaaagattcagaggaaaataaaggatggtttaactggttgtggacttggtcagaacca
aaaactaaagaacaacagcccgatgttaaacctggaagtcttgaagaaatcttgacacct
gaagaaaaaactttactctatgaagcaattggctatagtgaaacagcagttgacccaacc
ttgccaaaatcatttgaagccatgaagttgtacatgcacttgaaaagtatgtctattgtt
ctaagagaagaacaacgaaaacgtgagctattaaatattgtagtagaagaatttagcact
tgggttgtacaaagaccaggagcacaagcaatgaaatttgaaaccaaaatagattccttt
catgttactggcctaccagataattcaacaaaaccccgcctcctgtcctcattggataat
actgcatcacttttccagattacatttgagacaaatccattagatgaaactgttgctcaa
aggtgtatcatagaagctgaacctttagaaataatatatgatgcaagaacagtgaatagt
atagtggaattcttcagacctccaaaagaggtaaatctagcacagctcacttcagcgact
ttgacaaaacttgaagaatttcgtgataagacagcaacaggtctactgtatattattgaa
acacagaaagttcttgatctcagaattaatttgaaagcttcatatgttattatcccacaa
gatggaatttttagccctacatcaaatctgcttcttttggatcttggtcatttaaaggtg
acgagtaaaagtcgttcacaattaccagatatgaagcaaggtggggccagacttgaagag
ataatgcgtagagcttatgattcctttgatattcaccttacaagcattcagctgctttac
agcagagttggtgataattggaaagaagcacgaaaactcaatgtgtctacacagcatgtt
ttggtacctttgcacttcaatgtggaattctctaaggccatggttttcatggatataagg
atgcctaaattcaagatttttggaaagttaccactgatttctttgcgaatctcagataaa
aaactgcaaggaattttggaattgattgaaagcattccaaaacccacacctgcaactgaa
gtacatgcccctgtcaagccatttcagatgcagaggtccacttcattgggagcaccacag
atttcacagaaagtgattcctctcttggaacttgcaggtgttgaatatgagtcagaggag
gaattttatgatgcaccatgtagtcccgtggaagaatattttcagtcaacagctagtgtt
aaaagttatcaacaaaataagcttccagaactggattgttcaaaaaatatgattcagtat
aaaataagatttgaagtgccagaggtatcggttcaattttatcacctcgttgaggattgt
gaactacctgtggtagaaattgttgtcttaggattgggcacagaagtagaacttagaaca
tttgatttgaaagccaatgcctttttgaaagaattctgcttaaaatgcccagaatacttg
gatgtaaacgaaaagccagtttatttgattacaacactggataacacaatggaagatctg
ttaacactggagtatgtgaaggctgaaaagaatgtacccaacttgaaaagtgcctataac
aatgttgaacaactgattaaggtgaatttttcctctttggatattcatttgcatacggaa
gcactcctgaatacaataaactattttaataatttccttccacaattggaggaaaagtca
gcctcagtgcatgttgcagagacagaagacaagggagaggtcattaaaaaaatagcttca
agacgatacaggcatgaagatattaccttgcagatcttagcagaattatcatgtttacgg
atctttattcaagatcagaaacataacattgctgaaattaagattgaagggcttgattct
gagataattatgaggccttcagtaactgaagtaaatgcaaagctaaggaatataattgta
ttggattctgatataacagctgtatataaaaaggctgtttatatcactggaaaagaagtt
ttcagcttcaaaatcctttcttatgtgaatgcaactgctgattctgcatacacagatatg
agtgtggttgacattcaagttaatttaactgttggttgcattgaagtagttttagtcaca
aaatttttacattctatattggcttttatagataattttcaagcagttaaagaagccttg
gctgaggcaactgtccaggcagcaggaatggctgctactggtgtaaaagaactggcacaa
aggagttctagaatggcattagatgttaacatcaaagccccagttgtggtcatcccacag
tcttcaatttctgaaaatgtccttgttgctgattttggattaattacaatgaccaataca
ttccacatgataacagagagccagagcaatcccccacccattattgatttgattacgata
aagctgagtgaaatgcgactatacaggtctcagtatagtaatgatgcataccaggaagta
ctggatatactactgccattaaatcttgaggtgattgttgagcgaaatttagcctgggag
tggttccaggaagttccttgttttaatataaatgctcaactaaagcctatggagttcatt
cttagtcaagaagatataacaactatctttaaaacattatatggtaatatatggtatgaa
ggaggtggcagtgtcccaccagcaggagtgaaagatcagagtagtgttactagtggagtc
cctaatgcttcacatcattcaggaggaacaactgtagtgacagctgctgtggtagaagta
cattcatgtgccgctcaagttaagacaacactaaatatgagtttcagaactgattatctc
accatgatactttatagtccaggtcctgaacaggcttcctttacagatgttcgtgatcct
tctctgacacttgctgaatttaagttggagaatataataagtactttaaaaatgtataca
gatgactcagtattttctgccttctcattaaaaaactgtattttagatgataaaaggcct
catgtcaagaaggcaactcctagaatgataggactgacagttggatttgacaaaaaagat
atgatggatgtaaagtataagaaaatcagagatggttggatgtctgatgtagtccttcaa
gaaacatatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttcttgaa
gcctacaccacaggcactgctgtagaaaccaatgttcaagcatgggctactaaagaagaa
gtacctgcacaggtacaagaaaagtgggaagtgaatattcttattaaaaatcctgaaatt
gtgtttgtggccgatatgacaagaaatgatgctcctgccttagtcattacaacacagtgt
ggaatttgttggaagggtgaccttgaaaacaacacaatgactgctgctattaaagatctc
caaatgagagcatgcccatttcttcctgacaagagaaaagacagaatcactactgttttg
cagccctgtgacttgttctatcaagctactcagataggcagagatccacaagtgattgat
atatcactaaaatctctgacactaaaggtttcaccagttatcataaatactgtgattacc
ataactgcagcactttatacaactaaggaaaccatcccacaagaaactgcttcttctaca
gcacatttatgggaaaagaaggatacaaagactttaaaaatgtggtttcttgaagaacca
aatgaagtgaaaaacatagctcccacaactgaattggtacccaaaggagagataataaaa
atgaacattgattctatttttatagttcttgaggctggggttggtcatagaacagtgcct
atgcttttggcaaaatcatgtttttcaggggaaggcaaaaactggagttccctcataaat
ctccactgtcagcttgagctagaagtgcattattacaatgaaatgtttggtgtatgggaa
cctttgcttgaacctttagaaattgaccagactgaggaatttagaccatggaatcttgga
atcaagatgaaaaagaaagcaaaaaaggctattgttgagtcagatactgaagaagaacat
tacagagtgccagaatataaaactgtcatcagcttctattcaaaagaccaactaaacatt
acattatccaaatgtggtcttgtaatgttaaataatttagtcaaggcatttacagaagct
gcctctggatcttcaactgtcttcatgagggatctagcgccatttatgatttttaattct
cttggacttaccatctctgtttcaccaagtgattcttttagtgtgctcaacgtgccagtg
gcaaagtcatatatattgaaaaatgaggaaagtttaagtatggattatgtccgaacaaaa
gacaatgatcatttcaatgcaatgaccagcctaagcagcaagcttttcttcattcttctt
acacctgctaaccactctactgctgataaaattcccttaacaaaagtgggacgacgacta
tacactgtaagacacagagaatctggagttgaaagatctattgtttgtcaaattgatgca
gtggaaggaaataagaaggtaacagttcgctccccagtgcagattagaaatcatttctca
atcccactttgtgtttatgaaaggaatactttattgggaatggcttcacctggaaatgaa
tttaacataccattagcatcttaccgatcattcctttttctgaaaccagaagatgaggac
tatcaaatgtgtgaagcaattgactttgaagaaattataaaaaatgaaggcacttttcta
aagaggaaatgtaaacctataaacccttctaagaaaccatttattattaatgttgtccca
gaaaaagataatttgacatctctgtcagtatattcagaagatggttgggacttaccatac
ataatgcatttgtggccacctatcctactccgaaatcttcttccttacaaaattgtttat
tatatagaggggaatgaacatagagtttttactctaaatgaaggctcttctgcccatatt
tgtaccgtacaactggataaagccatactacatttaaaattacttgactatcttaatcaa
gattggaaaagtgaatatcatataaaacctaatcaacaagatattagtttcatcaatttt
acctgtgttacagaaatggaaaagactgatttagatattgctatccatgtgacttataat
cctggccagacagttgtggcatttcatagcccttactggatggtcaataaaactggtcga
atgttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaatgcca
gttctcttttcttttcagccaaagcacttttttaataacaataaggttcaacttatggta
actgatagtgacttgtcagatcagttttcaattgatactgttggtagtcatggagctgtt
aaatgtaaaggcatgaaaatggagtatcaagttggtgtcattatagacctcagcagtttt
aacattaccagaattgtgacatttacccctttttatatgatcaaaaacaaaagcaagtat
cgtatatcagtggctgaagaggggagtgataaatggctctctctcgatttggagcagtgt
atccccttttggcctgaggatgcgtcaaataaacttcttattcaagttgaaagaagtaga
ggccctcccaaaaagatacattttaacaagcaagaaaattgtattttattgcgtctggat
aatgagcttggcggtattatagcagaagttaatttggctgagcattctacagttattaca
ttttcagattatcatgatggagcagctacattcctattaataaatcacactaagaatgac
actattgaatataagcaaagttctctcagtgaaatagaagactctctccctcctggaaaa
gcagtactttatacatgggccgatccagtgggctctagaaagctgaagtggagttgtggg
aaaaatcacggtgaagtaacacaaaaagatgatatgatgacacctataaatttggggaaa
aagactatttatttagtttcattctttgaaggcttacaacgcattattttattcactgaa
gatccaaaggtatttaaagtgacatatgaaaatgagaaagcagaattagcagagcaagaa
attgtgttggcattacaagatgttggactttctctcgtcaataattacacaaagcaagaa
gtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaag
gcaagatggaagccaatgagtataaagcacactgagaagttagagaaagaatttaaggaa
tatactgaatcttcaccttcagaagataaggttattgagttggacactaatattccggtt
cgctttacacctagtggcaataacatgaaaattctgcaaccacatataatagctatacga
agaaattatctgccagcattaaacgtggaatataacacatctgcacatcaatcatcattt
agaattcaaatttatagaatacagatccaaaaccagatacatggtgctgtatttccattt
gtattttatcctattaagcctcccaagtcagtcaccatggattcagcacccaagcccttt
acagatgtcagtattgtcatgagatctgcagggcattcccagatatcacgtattaaatac
ttcaaagtgttgatccaagaaatggatctcaggttagatcttgggtttgtctatgcatta
gcagaacttatgacagaagctgaagtaactgaaaaaacggaggttgaactttttcataaa
gatatagaagttttccaagaagaatataaaacagtttcattagtagattcatcacaagtc
agtctctatgagtattttcatatatctcctatcaagctgcatttaagtgtttcactgagt
tcgggtaaagaagcagctaaagactcagaacaacatgaaggattcattgcaattagttct
ttaaatctcttgctgaagagtattggcgccactcttacagatgtacaagatgtagttttt
aagcttgcattttttgaactcaactatcagtttcatacaacatctgaactgcagtctgaa
gtaataagacactattcaaaacaggccattaagcaaatgtatgtactcattcttggactt
gaagttttgggaaatccctttggcttgattagagaattttctgaaggtgtagaagcattt
ttctatgaaccttaccagggagccatccagggtcctgaagagtttgtggagggaatggca
ctaggactgaaggcattagttggtggagctgttggtgggttagctggtgctgcttccaaa
atcactagtgctatggctaaaggggtagcagctataactatggatgaagactaccaacag
aagaggagagaagccatgaacaagcaaccggctggtcttagagaaggcatcactcgcgga
ggaaaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaagccaatc
aaaggagctcaaaaagaaggagcagctggtttctttaaaggtgttgggaaaggtttagtt
ggagcagtggcaaggccaactggaggcatcatagacatggctagcagtacatttcaggga
ataaaaagggctacagagacttctgatgaagtggagagtctgcgaccacctcggttcttt
aatgaagatggagttatcagaccttataggttgagggatggtactggaaatcaaatgttg
caggtcatagaaaatggaagatttgcaaaatacaaatattttacccatgtcatgattaat
aaaacagatatgttaatgataaccagaagtggggtattgtttgtaacaaaaggaacattt
ggacagcttacatgtgagtggcagtacagttttgatgagtttaccaaagagccattcatt
gttcatggaagaagattgcgaattgaagcaaaggaacgggtgaagtctgtattccatgcc
aaagagtttggaaaaataattaacttcaagaccgcagaggatgctaggtggatcctcaca
aagctagaagaagcaagagagccttccccgaccctctga
DBGET
integrated database retrieval system
