Eptesicus fuscus (big brown bat): 103288231
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Entry
103288231 CDS
T09083
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus04151
PI3K-Akt signaling pathway
efus04382
Cornified envelope formation
efus04510
Focal adhesion
efus04512
ECM-receptor interaction
efus04518
Integrin signaling
efus04820
Cytoskeleton in muscle cells
efus04926
Relaxin signaling pathway
efus04933
AGE-RAGE signaling pathway in diabetic complications
efus04974
Protein digestion and absorption
efus05146
Amoebiasis
efus05165
Human papillomavirus infection
efus05200
Pathways in cancer
efus05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103288231 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103288231 (COL4A1)
04518 Integrin signaling
103288231 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103288231 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103288231 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103288231 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
103288231 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
103288231 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103288231 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
103288231 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103288231 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
103288231 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103288231 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efus04147
]
103288231 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
efus00536
]
103288231 (COL4A1)
Exosome [BR:
efus04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103288231 (COL4A1)
Glycosaminoglycan binding proteins [BR:
efus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103288231 (COL4A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103288231
NCBI-ProteinID:
XP_054575939
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All DBs
Position
8:complement(73268748..73407477)
Genome browser
AA seq
1670 aa
AA seq
DB search
MGPRLGVWLLLLPAALLLHEERSRAAAKGGGCAGSGCGKCDCQGVKGQKGERGLPGLQGV
IGFPGMQGPEGPQGPPGQKGDAGEPGLPGTKGTRGTPGVSGYPGNPGLPGIPGQDGPPGP
RGIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGTLLKGERGFPG
PPGIPGSPGFPGMQGPIGPPGYAGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGP
PGMPGEAQYKEKGQFATKGEKGEKGEPGSYGMPGFGEKGEPGKPGPRGKPGKDGEKGEKG
SLGFPGDSGLPGQPGQPGFKGDKGEAGPPGPPGLVIGTGPLGEKGERGYPGSPGLKGEPG
PKGFPGQQGLPGPPGIPIPGQAGAPGFPGERGEKGDQGYPGASLPGPSGRDGFPGPPGLP
GPPGPPGYADGQVECRPGPVGDPGPPGIPGQPGLLGEVGEKGQKGEGCLVCDIEGLRGPP
GPQGPPGDTGYPGQPGAKGEKGLPGRDGVEGLPGPQGSPGLMGQPGAKGEPGEIYFDMRL
KGDKGDPGFPGQPGMPGRSGTPGRDGHPGLPGPKGSPGSAGLKGDRGPPGGVGFPGSRGD
IGPPGPPGFGPSGPAGDKGQAGFPGNPGPPGQPGLRGEAGRVMPLPGPPGADGLPGSPGF
QGPQGDRGFPGTPGRPGLPGEKGAVGQAGIGFPGPPGPKGVDGLPGDLGLPGNPGRPGIN
GFPGNPGPPGQKGEPGIGLPGLKGAPGLPGIPGTPGEKGNIGGPGIPGEHGAIGPPGLQG
IRGDPGPPGLPGPKGAPGVPGIGPPGLMGPPGRQGPPGSSGPPGVKGEKGFPGFPGLDMP
GPKGDKGTQGLPGLTGQSGLPGPPGQQGTPGLPGFQGLKGEMGVMGTPGQPGSPGPAGTP
GFPGEKGDHGFPGSVGPRGDPGVKGEKGAVGLPGKPGTMDKLDMDSMKGDKGDPGERGQV
GPIGDKGSRGDPGTPGVPGKDGQPGHPGQPGPKGDPGISGTPGSPGLPGPKGSVGGMGLP
GSPGEKGVPGIPGSQGVPGLPGEKGAKGEKGQAGRPGIGIPGQPGEKGDQGIAGFPGSPG
EKGEKGSLGLPGMPGPPGPKGSPGSVGYPGSPGLPGGKGDKGFPGLDGVPGVKGEPGLPG
QPGATGPPGPKGEPGNDGFPGSAGEKGEPGIPGRGVPGFPGSKGEKGSKGEVGFPGLAGS
PGIPGSKGEKGFSGPPGPQGQPGLPGAPGRPMEGPKGDRGPQGQPGLPGPPGPMGPPGLP
GIDGLKGDRGNPGWPGTPGPPGPKGDPGFQGMPGIGGTPGITGAKGDMGPPGVPGFQGQK
GLPGLQGIKGDQGDQGFPGSKGLPGPPGPPGPYQIVKGEPGLPGPEGPAGMKGFQGPPGP
KGQQGVTGSVGIPGPPGSPGFDGAPGQKGERGPSGPPGPRGFPGPPGPDGLPGSMGPPGT
PSVDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFST
MPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMA
VHSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGR
GTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcggcgtctggctgctgctgctgcccgcagcccttctgctccacgag
gagcgcagccgagccgctgcgaagggtggtggatgtgctggctccggctgtgggaaatgt
gactgccagggagtgaagggacaaaagggcgaaagaggcctcccaggattacaaggtgtc
attggatttccaggaatgcaaggacctgaggggccacagggaccacctggacagaagggt
gatgctggagaaccaggactgccaggaacaaaagggacaagaggaaccccaggagtatcc
ggttaccctggaaacccaggacttcctggtattcctgggcaagacggtcccccaggtccc
cgtggtatcccaggatgcaatgggacaaagggtgaacgagggcccctgggacctcctggt
ttgcctggattcgctggaaatcctggaccaccagggttacccggaatgaagggggatcct
ggtgaaatacttggccacgtgcccgggacgctgctgaaaggtgaaagaggatttcccgga
cccccaggaataccaggttcaccaggattcccagggatgcaaggtcccataggccctcca
ggatatgccggaccaccaggtcccccaggccctcctggccctccaggtgaaaagggacaa
atgggtttaagttttcaaggaccaaaaggtgacaaaggcgaccagggcgtcagtggccct
ccaggaatgccaggagaggctcaatataaagaaaaaggacagtttgccactaaaggagag
aagggtgaaaaaggtgaacctggatcttatggaatgccagggtttggagagaaaggggaa
cctggaaaaccaggaccccgaggaaagcctggaaaagatggtgaaaaaggagaaaagggg
agtctagggtttcccggcgactcagggttaccaggacaaccaggacaaccgggctttaag
ggagacaaaggtgaagcaggtcctccaggcccacctggacttgtgatcggcacaggaccc
ttgggagaaaaaggcgagcggggctaccccgggtctccgggtttgaaaggagagccaggc
cccaaaggtttcccaggacaacaaggcctgccaggccccccaggcatcccgatacctggg
caggctggtgctcccggcttccctggtgaaagaggagaaaaaggtgaccaaggatatcca
ggggcgtctttgccaggaccaagtggaagagatggattcccgggccctcctgggctcccc
ggacctcctggaccaccaggctacgcagatggacaagtggaatgccggcctggaccagtt
ggtgatccgggtcctcctggaattccagggcaaccaggattgttgggtgaagttggagag
aaaggtcaaaaaggagagggttgccttgtctgtgacatagaaggacttcgtggacccccc
gggccacaggggcccccaggagatacaggttacccggggcagccaggggccaagggcgag
aaaggtctacctggcagggacggtgtggaaggattgcctggccctcaaggttcacctggg
ctgatgggccagccaggagccaagggagagcctggtgagatttacttcgacatgcgactc
aaaggtgacaaaggagacccaggtttcccaggacaacccggcatgccaggcagatcaggg
actcccggaagagatggccatccaggtctgcccggccccaaaggctccccgggttcggca
ggattaaaaggagaccgtggcccccccggaggagttggatttcccggcagtcgtggtgac
atcggccctcctgggcctccagggtttggcccaagtggccctgctggtgacaaaggacaa
gcaggctttccaggaaatcctggacccccaggccagccaggtctcaggggtgaagcagga
cgagtcatgcctttacctggcccccctggagcagatggacttccgggttccccaggtttc
caagggccccaaggtgaccgaggtttccctggaaccccaggaaggcctggccttccagga
gagaagggcgctgtcggccaggcgggaattggatttccagggcctccaggccccaaaggt
gttgatggcttgcccggagatctgggacttcctgggaatccaggtcgcccaggaattaat
ggcttccctggcaacccaggtccacccggccagaagggagagcctgggattggcctgcca
ggactcaaaggagcgccaggtcttccaggcattcctggcacacctggggagaaggggaac
atcgggggaccaggcattcctggagagcatggagccatcgggccccctggccttcaggga
atcagaggtgacccaggacctcctggattaccaggtcccaaaggagctcccggagttcct
ggaattggtccccctggattgatgggcccccccggaagacagggaccaccaggatcctca
ggccctcctggagtgaaaggagagaagggtttccccggatttccaggcctggacatgccg
ggacccaaaggagataaaggcactcaagggctccccggcctaactggacagtcggggctt
cctggtcctcctggacagcaggggacaccaggacttcctgggtttcaaggtctcaaggga
gagatgggcgtcatggggaccccagggcagcctggctctccaggaccagcgggcacgcca
ggatttccgggtgaaaaaggggaccatggctttccgggctctgtaggacccaggggagac
ccgggtgtcaagggtgaaaaaggagctgtcggtctccctggcaaacctgggaccatggat
aaacttgacatggacagcatgaagggtgataagggcgatccaggagaacgaggacaagtt
ggcccaattggtgacaaaggatctcgaggagaccctgggaccccaggagtgcctggaaag
gatggccaaccagggcatcctgggcagccaggacctaaaggtgatccaggcattagcgga
accccaggttctccaggacttcctggaccaaaaggatcagttggtggaatgggcctgcca
ggatcacctggagagaaaggtgtgcctggaatccccggctcacagggcgtccctggctta
cctggagagaaaggagccaaaggggagaaggggcaggcaggccggcctggcattggaatt
ccgggacagcctggggaaaagggagatcaagggatagcaggttttccgggaagtcctgga
gagaagggagaaaaaggaagccttgggctcccaggcatgccggggcctccaggccccaaa
ggatccccaggaagtgttggctatccaggaagccctgggctgcctggaggaaaaggtgac
aaaggcttcccgggattggatggtgtccctggcgtcaaaggagaaccaggtcttcctgga
cagcctggcgcgacaggcccccccggcccgaaaggggaacccggcaatgatggatttcca
gggtcggcgggagagaagggtgaaccaggtatacccggaagaggcgtcccagggttccca
gggtccaaaggagagaaaggctcaaagggtgaagtgggtttcccaggattagctgggagc
ccaggaattcctggatccaaaggagagaaaggattctcgggtcctccggggccacaagga
cagccaggattgccgggagctccgggccgccccatggaggggcccaaaggagaccggggc
ccacagggacagcctggcctgccagggcctccgggaccaatggggcctccagggctccct
gggattgatggactgaaaggtgacagaggaaacccaggctggccagggactcctggtcct
ccaggacccaagggagacccaggattccaaggcatgcctgggattggtggtactccagga
atcacaggtgctaagggtgatatgggacctccaggagttccaggttttcaaggtcagaaa
ggtctccctggccttcagggaattaaaggagaccaaggagaccaaggtttccctggatct
aaaggtcttcccggtccccctggacccccgggtccctaccaaattgtcaaaggggagcca
gggctccctggtcctgagggtcccgccggtatgaaagggtttcagggacctccaggcccc
aaaggacagcaaggtgtgacgggatcagtgggcatacctggaccaccaggtagtcccggc
tttgatggtgcccctggccagaaaggagagaggggaccctctggacctcctggtccaaga
gggtttccaggaccacccggccctgatgggttgccaggatccatgggtcccccaggcacc
ccatccgttgatcatggcttccttgtgaccaggcacagtcaaacaatagatgatccgcag
tgtcctcccgggaccaaaattctttaccatgggtactctttgctctacgtgcaaggcaat
gaaagggcccacggacaggacttaggcacggccggaagctgcctgcgcaagttcagtacc
atgcccttcctgttctgcaacatcaacaatgtctgcaacttcgcctcccgaaatgattat
tcctactggttgtccaccccggagcccatgccaatgtccatggcacccatcgccggggac
aatattagaccatttattagcaggtgtgcggtgtgtgaggcgccagccatggtgatggct
gtgcacagccagaccattcagatcccgcagtgccccaacgggtggtcctcactctggatt
ggctattcctttgtgatgcacaccagcgctggtgccgaaggttctggccaagccctcgca
tcccccgggtcctgtctggaagagtttagaagtgcgccattcatcgagtgccacggccgt
gggacttgtaattactatgcaaatgcttacagcttttggcttgccactatagagagaaat
gagatgttcaagaagcccacgccgtccaccttgaaggctggggagctgcgcacgcacgtc
agccgctgccaagtctgtatgagaagaacataa
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