Eptesicus fuscus (big brown bat): 103288535
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Entry
103288535 CDS
T09083
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
efus
Eptesicus fuscus (big brown bat)
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efus03009
]
103288535 (PDCD11)
Ribosome biogenesis [BR:
efus03009
]
Eukaryotic type
90S particles
Other 90S particles
103288535 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
OB_RRP5_4th
Suf
OB_RRP5
TPR_14
TPR_19
ARM_TT21
TPR_CcmH_CycH
TPR_15
ARM_TT21_5th
TPR_16
DUF7017
DUF2110
Motif
Other DBs
NCBI-GeneID:
103288535
NCBI-ProteinID:
XP_028005179
LinkDB
All DBs
Position
17:44909038..44948043
Genome browser
AA seq
1876 aa
AA seq
DB search
MATMEESFPRGGTRKTHKSEIAFQQTVEQDNLFDISTEEESIKRKKSQKGPAKTKKLKIE
KKESSKSIKEKFEILSIESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEISDAYT
KKLNEQVEQEEPLKDLASLPELFSPGMLVRCVVSSLGITEKGKKSVKLSLNPQNVNKVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVGGARAFLPLQKAQEYIRQKNKGAKLKVGQYLN
CVIEEVKGNGGVVSLSIGHSEVSTAIATEEQNWTLNNLLPGLVVKAQVQKVTPFGLTLNF
LSFFTGLVDFMHLEPKKAGTYFSNQAVRACVLCVHPRTRAVRLSLRPVFLQPGRPLTQLS
CQHLGAVLDDVPVQGFFSKAGATFRLKDGSLAYARLNHLSDSKKAFSPEAFKPGNTHKCR
IINYSQMDELALLSLRTSIIEAQFLGYHDIKPGALVKGTVLTIKPYGMLVKVSEQIRGLV
PPMHLADIPMKNPEKKYHIGDEVTCRVLLCDPEAKKLMMTLKKTLVESKLPAITCYDNTK
PGLQTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYTGQVVKVVVLNCE
PSKERMLLSFKLLSDPQKEHVGHSQKKRRAVNVGQLVDVKVLEKTKDGLEVTVLPHNIPA
FLPTSHLSDHVANGPLLYHWLQAGDTLHRVLCLSQSERHVLLCRKPALVSTVEGGQDPKT
FSEIHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAK
VTNVDEEKQRMLLSLRLSDCTLGDRATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAE
MTPGMVLDLEVQEVLEDGSVVFSEGPVPGLVLRASKYHRAGQEVESGQKKKVVILNVDML
KLEVHVSLCHDLVNRKAKKLKKGSEHQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDT
FRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRQTRKDSETVDEDDEGDAS
MVVGTKKKHTLSIGDMVTGTVKSIKPTHVVVTLENGIIGCIHASHILDDVPEGTSPTAKL
KVGKKVTARVIGGRDVKTSKFLPISHPRFIRTIPELSVRPSVLEKDDHTALNTHSDSPLE
KIKQYQAGQTVTCFLKKYNVIKKWLEVEIAPDIRGRIPMLLISLSFKVLKHPDKKFQIGQ
ALKATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPNKGLTVSFPFGRTGRVSIF
HVSDSYSEAPLEDFAPQKIVRCYVLSTADEVLTLSLRSSRTNPETKSKVPDPEINSTQDI
QEGQLLRGYVKSVQPHGVLLGLGPSVVGLAQYPRVSQDSPSEKALYERYLPEGKLLTAKV
LSVDHQKNLVELSFLPSDTGKPDVFSASPGLSPLKQGEKQIEVEERDHKGKEEKEKKKNQ
KRKKKRNQKGQEEAQLPSKEKKEPQKPHAEKQGKRPHLESASEQERANKKQKKAAPAEEE
DSGVEVYYREGEEEMEEISVLPKGKQTRPADVPRLQLSSGFIWDVGLESLTPALPPRRES
SDSEEDEKPQQTTQKKKSKKERELEKQKAEKELSRMEEALMDPGRQPESADDFDRLVLSS
PNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQE
SLTKVFERAVQYNEPLKVFLQLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFL
LRRGQAGASHRVMQRALECLPQKEHVDVISKFAQLEFQLGDAERAKAIFENTLSTYPKRT
DVWSVYIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVK
AKALDYVEAKSSALED
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggaagaaagcttcccccgtgggggtacaaggaagacccacaaatcagag
atagcgttccagcagacagttgaacaagacaacttatttgatatttctactgaagaggaa
tccatcaaaaggaaaaaaagccagaaagggccagcaaaaacaaaaaagttgaaaattgaa
aagaaagaaagcagcaagtctataaaagagaagtttgaaatccttagtattgagtccctg
tgtgaggggatgcggattttgggttgtgtgaaagaggtaaatgaactggaactggtgatt
agtctccccaacggcctccaggggttcgtgcaagtaactgaaatcagtgatgcttacaca
aaaaaactgaatgagcaggtggagcaagaagaacctctaaaggacctggccagcttgcct
gaactgttctctcctgggatgctagtgagatgtgtggtgagcagtctgggcatcacagag
aaaggcaaaaaaagtgtcaagctatctctgaacccccaaaatgtcaacaaagtgctgagt
gcggaggccctgaaacctggcatgttgctcacaggcactgtgtctagtctagaagaccat
ggctacctagtggacattggtgttggtggggccagagctttcctgccactgcaaaaagcc
caggagtatatcagacagaagaacaaaggtgctaagctgaaggtgggtcagtacctgaac
tgcgtcattgaagaggtgaaaggcaatggaggagttgttagtctgtctattggtcattca
gaagtttctactgccattgctactgaggagcaaaactggacccttaataacttgctacct
ggactggtggtcaaagcccaggtacagaaggtgactccatttggtcttacactaaacttc
ctctcattcttcactggcctggttgattttatgcacttagagcccaagaaagctggaaca
tacttctcaaatcaagcagtgagggcctgcgtcctctgtgtccatcctcggaccagagct
gtgcggctgagcctgcgccccgtcttcctgcagcctgggcgcccactcacccagctgtct
tgtcagcacctcggagctgtcctggatgatgttcctgtccagggctttttcagcaaggcc
ggggccactttcagactgaaggatgggtctctggcctatgctcggctcaaccatctctct
gattctaagaaagccttcagtcctgaagccttcaagccaggaaacactcacaagtgtaga
atcatcaactacagccaaatggatgaactggctttgctctctctgcggacgtctattatt
gaagctcagttccttggatatcatgacatcaaacctggggcattggtaaagggcacagtg
ctgaccataaagccatatgggatgttggtgaaggtgagtgagcaaatcaggggcttggta
cctcccatgcacctggccgacatcccgatgaagaatccagagaagaagtaccacattggg
gatgaagtcacatgccgggttttgctttgtgaccctgaagccaagaagctgatgatgacc
ctgaagaaaaccctggttgagtccaaactacctgccattacctgctatgacaacactaag
cctggtctgcagacacatggcttcatcctcagggtcaaggactacggctgcattgtgaag
ttctacaatgatgtgcagggactggtccccaagcacgagctcagtgctgagtatgtccct
gacccagagagggtcttttacactggccaggtggtgaaggttgtggtgctgaactgtgag
ccatccaaagagaggatgctcttgtccttcaagctgttgagtgatccacagaaagagcat
gtgggacacagtcagaagaaaagaagagctgttaacgttgggcagttggtggatgtgaag
gttttagagaagacaaaagatgggctggaagtgactgtcctgccccacaacatccctgct
ttccttcccacgtctcatctgtcagaccacgtcgccaacggcccactgttatatcactgg
ctccaggctggtgacacccttcacagagtcctgtgtctgagtcagagtgagagacatgtt
ctcctttgtaggaagccagctttggtctccacagtagagggaggccaggatcccaagacc
ttctcagaaatccatcctggaatgctgctcattggctttgtgaagagcatcaaggactat
ggtgtgttcgttcagttcccctcaggccttagcggactggcccccaaagctatcatgagt
gacaaatttgtgacctccacaagtgaccactttgtcgaggggcagacggtggttgcaaag
gtgaccaatgtggacgaggagaagcagcggatgctgctgtcgctgcggctgtcggactgc
actctgggagaccgggctaccaccagcctcctcctcctgagccagtgcctggaggagcgg
cagggtgtgcgcagcctcatgagcaaccgagactctgtgttgatccagacgctggctgag
atgaccccagggatggtccttgacctagaggtgcaagaggtgttggaagatggctctgtg
gtgttcagtgagggcccagtgcctggtctggtcctgagagccagcaaatatcatcgggca
gggcaggaggtggaatctgggcagaaaaagaaggttgtgatcttgaatgttgacatgttg
aagttggaagtacatgtttccctttgccacgatttggtgaataggaaagctaaaaagctg
aagaaaggcagtgaacaccaggcgattgtgcagcacttggaggagtcctttgccgtcgct
tccttggtcgagactggccacctggcagctttctctctgacctctcatctcaatgacaca
ttccgctttgactcggagaagttgcaagtgggacaaggtgtctccctaactctcaagact
acggaacccggagtgactggccttcttttggctgtggagggaccagctgctaagaggaca
atgagacagacccggaaggactctgagacggtcgacgaggatgatgaaggggatgcgtca
atggttgttgggactaaaaagaagcacaccctctccattggggacatggtcacagggact
gtcaagtccattaagcccacccatgtggttgtgactctggaaaatggcatcattggctgt
atccatgcctcccacattctagatgatgttccagagggcacatctcctactgccaagctg
aaggttgggaagaaggtcactgcccgagtgattggagggcgagacgtgaagacatccaag
tttctcccaataagtcatcccagatttatccgaaccatcccggagctgagtgtacggcca
agtgtgctggagaaggatgaccacactgctctcaacactcactccgatagccctttggag
aagattaaacagtaccaggctggtcagaccgtgacttgcttcttgaagaagtacaacgtg
attaagaaatggcttgaggtggagattgctccagacatccggggaagaattcccatgttg
ctcatttctcttagctttaaggttctgaaacatccagataagaagttccaaattggccag
gccctgaaggccaccgtggttggtcctgattcctcgaaggccttcttgtgtctctcactc
ataggtcctcacaagcttgagaagggggaagtggccatgggccgcgtggtgaaggtgacc
cccaacaaggggctgactgtctccttccccttcgggaggactggaagagtcagcatattt
cacgtgagtgactcctactcagaggcgcccctggaagacttcgccccccagaagattgtc
aggtgttatgtcctgtccactgcagacgaggtattgactttgtcgctgcgatcgtccagg
acaaacccagagacgaaaagcaaagtaccggatcccgagattaactccacccaggacatt
caggaggggcagctcctgaggggctacgtgaagtccgtgcagccacacggcgtgctcctt
ggccttggcccctcagttgtgggattggcccagtacccacgtgtctcccaggacagccca
tccgagaaagccctttatgagagatacctccccgaagggaagctgctcacagccaaggtc
ctaagcgtggaccaccagaagaacctggttgagctgtcgttcctccccagcgacactggg
aagccggacgtgttttctgcctccccaggactgtcacctctaaagcaaggggagaagcaa
atagaggtagaggagagagaccacaaaggaaaagaagagaaggagaagaagaagaaccag
aaaaggaagaagaagaggaaccagaaggggcaggaggaggcccagctgcctagcaaagag
aagaaagagccccagaaaccacacgcagagaagcagggcaagcggccacatctggagtct
gcaagtgagcaggaaagggcaaacaagaagcagaagaaagctgctccggccgaggaggag
gacagtggagttgaagtgtattatcgggaaggagaagaggagatggaagagatcagtgtg
ctgcccaaggggaagcagaccaggccagcagacgtgccccggctgcagctgtcttccggc
ttcatttgggacgtggggctggaatctctgaccccggccttgccacctcgaagagagagc
tcagacagcgaggaagacgagaagccacagcaaaccacgcaaaagaagaaaagcaagaag
gaaagggagctggagaagcagaaggcagagaaagagctgtcccgcatggaggaggcgctg
atggaccctggacgacagccagagtcagccgatgattttgaccgactggtgctgagctcc
cccaacagctccatcctgtggctgcagtacatggccttccacctgcaggccacagagatc
gagaaggcccgggccgtggccgagagggctctcaagaccatctccttcagagaggagcag
gagaagctgaacgtgtgggtggcactgctgaacctcgagaacatgtacggctctcaggag
tcactgaccaaggtcttcgagcgggctgtgcaatacaatgagcctctcaaggtctttctc
cagctggctgacatctacaccaagtcagagaagttccaggaagccggtgaactctacaac
cggatgctgaagcgtttccggcaggagaaagctgtctgggtcaaatatggggccttcctt
ctgcggaggggccaggctggggccagtcaccgtgtgatgcagcgagccctcgagtgcctg
cctcagaaagagcacgtggatgtgatctccaagttcgcccagctggagttccagctgggg
gatgcagagcgggccaaggctatttttgagaacacactgagcacctacccaaagcgcacg
gatgtctggtcagtctacatcgacatgaccatcaagcatggcagccagaaggaagtccgg
gacatcttcgagcgcgtcatccacctgagtctggcccccaagcgaatgaaattcttcttc
aagcgctacctggactatgagaagcagcacggcaccgagaaggacgtgcaggcagtgaag
gcgaaggccctggactatgtggaggctaagagctccgcgttggaggactag
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