Eptesicus fuscus (big brown bat): 103288715
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Entry
103288715 CDS
T09083
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
efus
Eptesicus fuscus (big brown bat)
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efus03041
]
103288715 (YTHDC2)
Enzymes [BR:
efus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103288715 (YTHDC2)
Spliceosome [BR:
efus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103288715 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
HA2_N
AAA_19
Ank_2
nSTAND3
AAA_22
ATPase
PhoH
AAA_7
AAA_16
UvrD-helicase
AAA_29
T2SSE
SRP54
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
103288715
NCBI-ProteinID:
XP_008142689
LinkDB
All DBs
Position
4:complement(46353774..46426850)
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AA seq
1432 aa
AA seq
DB search
MSRPSSVSPRPPAPGGGGGGGGGGGPAQSGPGGGARAKGLKDVRIDEEVKIAVNIALERF
RYGDQKEMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMT
CNLTHNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQ
IPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK
NGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVL
LRTLMAGDSTLSAVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLF
IRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYS
AQENTVKPESQRQRTIPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDI
WLNKDVEAFAQIFHLILTENVSVDYRHSETSATVLMVAAGRGFSSQVEQLISMGANVHSK
ASNGWMALDWAKHFGQTEVVDLLESYSASLEFGNLDESSLVQTNGNDLNAEDRELLKAYH
HSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRY
QVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDA
LNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQEL
CLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLP
VEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSD
HMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGG
DIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGSKEKKVRFHPTSVLSQPQYKK
IPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQE
SSSFRADGIPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLR
RMRAPSKPWSQVDEATIRAIIAALSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSN
NSRKSSADTEFPDESTSTERVLMKSPSPALHPPQKYKDRGILHPKRSADDRPDQASAKST
EDYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNER
KLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGKEKSQDWGSAGLGGVFKVEWIRKES
LPFQFAHHLLNPWNDNKKVQISRDGQELEPQIGEQLLQLWDRLPSGEKTTTD
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctccccacggccgccggctcccggcggcggtggtggcggc
ggcggcgggggcggcccggctcagagcggccctgggggcggcgcccgggccaaggggctg
aaggacgttcgcatagacgaggaggtgaaaatcgcagttaatatcgctctggagcgcttc
cgatacggggaccagaaagaaatggaatttccttcttctttgaccagtaccgaacgagcc
tttattcatcgattgagccagtctcttgggttggtctctaaaagtaaaggaaagggagca
aatagatacctaactgtgaagaagaaagatggatcagaaacagctcatgcaatgatgacc
tgtaatttgactcataatacaaaacatgctgttaggagcctaattcaaagatttcccgtc
acaaataaagaacgtactgaacttctgcctaaaacagaaagaggaaatgtgtttgcagtt
gaagctgaaaaccgggaaatgagcaagacaagtgggcgactcaacaatggcatacctcag
attccagtgaaaagaggagaatccgaatttgattctttcaggcagtctttgccagtgttt
gagaaacaagaagaaattgttaaaataattaaagaaaataaagtagttttgattgtagga
gaaactgggtctggaaagactacacagattcctcagttcctattagatgattgctttaaa
aatggtatcccttgccgaatattttgtactcaaccaagacgattagcagctattgctgtg
gctgaaagagttgctgcagagagaagagaaaggattggtcaaacaattgggtatcagata
cgattagaaagcagggtttctccaaagacacttctgacattttgcactaatggggtattg
cttcgaacattgatggcaggagatagtacattgtcagctgtgacacatgttattgtggat
gaagtacatgaaagagatcgatttagtgattttttacttacaaagttaagagatttgttg
caaaagcatccaactttgaaactaattctttctagtgctgccttggatgtaaatctcttt
ataagatattttggaagttgtccagtaatatatatacagggaagaccatttgaagtaaaa
gaaatgtttctggaagatattttaagaactactggatatacaaataaagaaatgttaaaa
tacaaaaaggaaaaacagcgagaagaaaaacaacaaaccacacttacagaatggtattca
gctcaagagaatactgtcaagcctgaatctcagaggcaaagaacaattccaaatgtgact
gaagagtatgatttattggatgatggtggtgatgctgttttcagtcagttgacagaaaaa
gatgtgaattgccttgaaccatggttaataaaggaaatggatgcttgtctttctgatata
tggctgaataaagatgttgaggcctttgctcagatttttcaccttattttaacggaaaat
gttagtgtcgattacagacatagtgaaaccagtgcaacagttctgatggttgctgcagga
cgaggtttttcaagtcaagtggagcagttaattagtatgggagccaatgtccatagcaaa
gcatcaaatggctggatggctttagattgggctaaacactttgggcagactgaagttgtg
gatcttctagaatcttacagtgcttcattggaatttggaaatctagatgaaagttctctg
gttcagacaaatggaaatgacctcaatgcagaagatagagagctcctgaaagcttatcat
catagttttgatgatgaaaaagtagacttggatttgatcatgcatcttctgtacaatatc
tgccatagttgtgatgctggtgcaatattaatttttctgcctggatatgacgaaattgtt
ggattgagggatcgcatcctatttgatgataagcggtttgctgacaatacacatagatat
caagtctttatgcttcattcaaacatgcaaacatctgatcaaaagaaagtattaaaaaac
ccacctgcaggtgttcgaaaaataatcctttccaccaatattgctgaaaccagcatcaca
gtcaatgatgttgtctttgttattgattctggtaaggtgaaagagaagtcctttgatgca
ctgaattttgttacaatgttaaaaatggtgtggatttccaaagctagtgccatacaacga
aagggcagggcagggcgatgtagacctggaatttgttttcgtctgttcagtagactccga
ttccagaatatgttggaatttcagactccagaacttttgagaatgccattacaggaactt
tgtttacacaccaagctgttagccccagttaattgtcctattgcggatttccttatgaaa
gctcctgaacctccaccagctttaattgtacggaatgctgtacaaatgcttaagacaata
gatgcaatggatgcgtgggaagatctcactgaacttggatatcatttggctgacttgcca
gtagaaccacatcttggtaaaatggtcctgtgtgctgttgttttaaagtgtctggaccct
atccttacaattgcctgcacactagcctatcgagatccttttgtcctgccaacccaggcc
tctcaaaaacgcgcagctatgctttgtaggaaacgtttcactgctggaactttcagtgat
catatggcacttctcagagcattccaggcatggcagaaagcacgaagtgatgggtgggag
cgagccttttgtgaaaagaattttctttcacaagctaccatggaaataatcataggcatg
agaactcaattgctcggtcaacttagagcatcaggttttgttagagcacgaggtggtggt
gacattcgagatgttaacacaaattccgagaattgggctgtcgttaaagctgcattggtg
gcaggcatgtatcctaatttagtccatgtggacagagagaatttagtattgacagggtca
aaggagaaaaaagtacgatttcatcccacttcagttctcagtcagcctcaatataaaaag
attcctccagccaatggtcaagctgcagcaattcaggcactgcccacagattggcttatt
tatgatgaaatgaccagagcccatagaatagctaacattagatgttgttcagcagtgaca
cccgtcactgtattggtattctgtggaccagctagattggcaagtaatgctcttcaggaa
tcttcatcctttcgagcggatggtattcctaatgatagtagtgatagtgaaatggaagat
agaactactgctaatctggcagctttgaaacttgatgagtggctcaatttcaaactagaa
cctgaggccgccagtttattgctgcagctcagacagaagtggcacagcttatttttacgc
cgaatgagagctccatcgaaaccgtggtctcaagttgatgaagcgaccattagagcaatt
atagctgctttaagtactgaagaacagtctgcaggtttacaacaaccatctgggattggc
caaaggccaaggcctatgtcttcagaagaacttcctttggcatcatcttggaggtcaaat
aatagtaggaaaagttcagcagatactgaatttcctgacgagtctacttctacagaaaga
gtattgatgaaatctccatctccagcactacatccacctcagaagtacaaagatagagga
attttacatcctaaacgaagcgctgatgaccgaccagatcaagcttctgcaaaatctaca
gaagattacccaagtccttgtgctagcccttctcctccatcctcaggaaaggggtcaaaa
tctccttcaccaagaccaaacatgcctattcgatacttcataatgaagagtagcaatttg
agaaaccttgaaatttctcaacagaagggtatttggtctacaacccctagtaatgagcgg
aagctaaatcgagccttttgggaaagcagcatggtttacttggttttttctgttcaagga
tctggacatttccagggattttctaggatgtcatctgagataggaaaggagaagagccag
gattggggctccgctggactaggaggagtgtttaaggtggagtggatacggaaagaaagt
cttccctttcagtttgcacatcatttactcaatccttggaatgataacaagaaagtccag
ataagcagagatgggcaggaactagaacctcagattggggaacagttgctacagttatgg
gaccgccttccatcaggagaaaaaacgacaactgattga
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integrated database retrieval system
