Eptesicus fuscus (big brown bat): 103288766
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Entry
103288766 CDS
T09083
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein
KO
K12600
superkiller protein 3
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103288766 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103288766 (SKIC3)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
103288766 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_17
TPR_8
TPR_14
TPR_CcmH_CycH
TPR_16
TPR_11
TPR_12
ANAPC3
TPR_9
ARM_TT21_2nd
Sel1
ARM_TT21_C
Fis1_TPR_C
ANAPC5
TPR_15
ARM_TT21_5th
TPR_5
Retrotran_gag_2
TPR_20
TPR_30
BTAD
TPR_6
Motif
Other DBs
NCBI-GeneID:
103288766
NCBI-ProteinID:
XP_008142754
LinkDB
All DBs
Position
4:59028619..59098969
Genome browser
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNQINAKDDLPAVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQDKKHIEVARTWHKLIKIRQEAGADNQELHQLWGKLTQLLAESTEDQNNETQQ
LLLTAFENALDLSDKIPSEDHEVLYRHFIQCLSKFPHETARLKKACEGMINIYPTVQYPL
EVLCLHLIESGILTDEGQQYCCRLVEMDSKSGPGLIGLGIKALQDKKYEDADRNLREGLK
ESPLCTTGWYHLAEAQVKMHRPMEAILSCNQALKNIDNVGVSGGSLHQKNLCLRLKAEAL
IKLPDNESAEEAICTLDQVSDANNIPGLLVLKSLAYLNKGSLNEASKIMEDVLSSYPDLA
EAHALEAFIHFTKKDYLQAEKCFQRALEKDAEVAEYHYQLGLTYWFMGEETRKDKTKALT
HFLKAARLDTYMGKAFCYLGHYYRDIAGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAVAQYQLIIK
TKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWALQHRADVSCLWKLV
GDACTSLHAVSPSKVNVNVLGVLLGQKGGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAETGSNMNDLKDLLEKSLHCLKKAVRLNSKSHLYWNALGVVSCYSGI
KNYALAQHCFIKSIQSEQINPVAWTNLGVLYLANENIEQAHEAFKTAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYRYNILQMN
AIPAAQVVLSKYIERIPNYAPALTMLSYLNEHLQLKKEAADALHRAILLLQNAEDQVNYH
DAIRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSI
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSVLKEPTIESLQALCALGLAMQDAPL
SRAALNELLKHVRQKDNEYQRCLLTSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLS
RVVAQYAQRNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSAEDEKNIALKTIQ
KATLLSPGDPAIWAGLMAACYADDKLALVHNTQPKRMDLYLALLSAVSASIKDKEFFESY
NESLEKWSLSQAVTGLVDTGRISEAEALCTKNLKGNPDQPAVILLLRQVQCKPLLESQKP
LPDAVLEELQKTVMSNSTSVPAWQWLAHIYQSQGMMGAAEMCYRKSLQVASQQGSWSGKL
SSLLRLALLALEVCMANISNDHWPSLVQEATTEALKLCFCPLAILLQALLQFNRKMGARE
TRRLLERLVYQPGYPKSIVSTARWYLLRHLHAKNDGELIDVLVNNAKTHGDTRALDLNQK
LSS
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaaggaagtgaagactgctctaaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctctgaaacattgtaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtatttattggtgttgccgcagccgagctagaacaacctgatcaggcccag
ggtgcctataagaaagcggctgaactggagccagaccaattactagcttggcaggggtta
gcaagcctgtatgagaaatgtaatcagataaatgctaaggatgacttacctgctgtttac
caaaagctcctggatctttatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctgtattaccaagacaagaaacacatagaggtggctcgaacatggcac
aagttgataaagatacggcaagaagcaggtgcagacaaccaagagcttcatcagctgtgg
gggaaattgactcagttgctggctgagagcactgaggatcagaataatgagacccagcaa
ttgcttttaactgcttttgagaatgcactggatttatcagataagattcctagtgaagat
catgaagtactttatagacatttcattcagtgtttatccaaatttcctcatgagactgct
aggttgaagaaggcctgtgaaggaatgataaacatctaccccactgtgcagtatccatta
gaagtgctttgtttgcatttaattgaatcaggaattcttactgacgagggacaacagtat
tgttgtagactagtggaaatggattcaaaaagtggtccaggcctcattggtttaggcatt
aaagcattacaagacaaaaagtatgaagatgctgataggaacttaagagaagggttaaaa
gaaagccctctctgcacaactggatggtatcatctggcagaagcccaagtcaaaatgcat
agacctatggaagctattctttcatgcaatcaagctctgaagaacatagataatgttggt
gtgtctggtggcagtcttcatcagaagaatctttgtcttcgtttgaaagcagaggctttg
attaaactcccagataatgaatctgcagaggaagcaatttgtactcttgaccaggtttct
gatgcaaataatatcccaggacttttggttctcaaaagcttggcctatctgaacaaaggc
tcattaaatgaagcttcaaagattatggaagacgttctctcttcttaccctgacctagct
gaagctcatgccctggaggcctttattcattttaccaaaaaggactatctacaagcagaa
aaatgttttcagagagctcttgagaaagatgctgaagttgctgaatatcattaccaactt
gggttaacatattggttcatgggtgaagaaacaagaaaagataaaacaaaggctcttacc
cactttttaaaggctgccagactggatacatatatgggcaaagctttctgctatttaggc
cattattacagagatatagcaggagataaaaacagagctcgtggatgttataggaaagct
ttcgaattggatgacactgatgctgaatctggagctgcagctgtcgatttaagcgtggag
cttgaagagatggaaactgccttagctatcctcacaacagtaactcagaaggcaagtgct
ggaactgccaaatgggcctggcttaggcgaggactgtactatttgaaagctggtcaacat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggaatcattaggagaggcatacttaagcagaggtggctatacaacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggtggcagca
atacagcaaatcctaggcaaatataaggaggctgtagctcaataccagctgatcattaaa
acgaaagaagattatgtacctgctttgaaaggtttgggtgaatgccatctcatgatggca
aaagcagctctagtcgattatcttgatgggaaagctgtcgactacatagaaaaagcactg
gaatattttacttgggctctgcagcatcgagctgatgtgtcttgcctttggaagctggtt
ggggatgcttgtaccagtctgcacgctgtctcaccatctaaagtgaatgttaatgtctta
ggagtccttctaggccagaaaggaggaaaacaagtattaaagaaaaatgagctcctccat
cttggaggaaggtgttacgggcgtgcattaaaactgatgtctacatctaatacatggtgt
gatcttggaattaattattatcgtcaagcacaacatctagcagaaactggcagcaacatg
aatgatcttaaagacttgctggagaaatcattacattgtctgaaaaaggcagtgagactc
aacagtaaaagtcacttatactggaatgctctcggtgtggtttcatgttatagtggtatt
aaaaattatgcccttgctcagcattgtttcatcaaatcaatccagtcagagcaaattaat
cctgttgcatggaccaacttgggagtgttataccttgcaaatgaaaacattgagcaagct
catgaagctttcaaaacagctcagtcccttgatccatcttatttaatgtgctggattgga
caagctcttattgcggagacagttggaagttacgacaccatggatcttttcaggcacacc
acagaactcagtatgcacactgagggagcaatcggttatgcatactgggtctgtactaca
ttgcaagataaaagcaacagagaaacagaactgtaccggtacaacatcctccagatgaat
gctatcccagcagcacaggttgttttgagtaaatacatagaaagaattccaaactatgct
ccagctctcacaatgttgagttatttaaatgaacatctacagctgaaaaaggaagcagca
gatgcactccacagggcaattttgttgttacagaatgcagaagaccaagttaattatcat
gatgcaattagaaattatggcagattgttatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacaccccttgaagagttagaagacatcataggttttgctctggct
ttatttatgaagggtctgtataaagaaagcagtaaagcctatgagagagccttgtctatt
gttgaatcagagcaagacaaagcccatatcttgacagctctggcaataacggagtataaa
caaggaaaaatggatgtagccaagacattgctgtttaaatgctctgtcttaaaggagcca
accatagagagccttcaggctctgtgtgccttgggattggcaatgcaggatgctccactg
tccagagcagctcttaacgagttactgaagcacgtcagacagaaagacaatgagtatcag
aggtgccttcttacttcagcgatttatgcgctgcaaggccgcagcgtggcagtgcagaga
caagcatctaaagctgttcacagtaacccagctgatcctgctctttggtctctgttgtcc
cgagtggttgctcagtatgcgcaacgaaatgcaaagggaggtgctgtagcaggaaatgtg
gctcatattctggactcaaatcatggaaagaaagcattactgtacactgcagtaaatcag
ttggctatgggaagcagttcagcagaagatgaaaaaaatattgcactaaagaccattcag
aaggcaactctcctttctccaggtgatcctgctatctgggctgggctaatggcagcttgt
tatgctgatgataagctggctctagtgcacaacactcagccaaaaaggatggatttgtat
ttggcactgttatctgctgtttctgcttcaattaaagacaaagaattcttcgaaagttac
aacgaatctctggaaaagtggtctctctcccaagctgtcactggtctagtagacacagga
agaatatcagaagctgaagccctttgcacaaagaatttaaaaggtaaccctgatcagcca
gctgttatcttacttttgagacaagtgcagtgtaaaccactcctggaatcacaaaagcct
ctcccggatgctgtccttgaagagctgcaaaaaactgttatgtccaactcaacctccgtt
ccagcgtggcagtggttggcgcacatatatcagtctcaaggaatgatgggtgctgcagag
atgtgttataggaagagtctacaagttgcatcccagcagggcagttggagtgggaagctg
tcgagtctgttgaggctggcactgctcgcattggaagtctgcatggccaacatttcaaat
gatcactggccatccttggttcaggaagctacaactgaggccttgaagctttgcttttgt
ccactggctatccttttacaagctttgttacagttcaaccgcaaaatgggggcaagagag
acacggcgacttttggagagactggtatatcagcctggctatcccaaatctattgtatca
actgcacgttggtacctactgaggcacttacatgcgaaaaatgatggcgagctcattgat
gtgctggtaaacaatgccaaaactcatggagatacaagagcactggacctgaatcaaaaa
ctgtcctcataa
DBGET
integrated database retrieval system
