Eptesicus fuscus (big brown bat): 103289388
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Entry
103289388 CDS
T09083
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus04151
PI3K-Akt signaling pathway
efus04510
Focal adhesion
efus04512
ECM-receptor interaction
efus04820
Cytoskeleton in muscle cells
efus04926
Relaxin signaling pathway
efus04933
AGE-RAGE signaling pathway in diabetic complications
efus04974
Protein digestion and absorption
efus05146
Amoebiasis
efus05165
Human papillomavirus infection
efus05200
Pathways in cancer
efus05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103289388 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103289388 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103289388 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103289388 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103289388 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
103289388 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103289388 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
103289388 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103289388 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
103289388 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103289388 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efus04147
]
103289388 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
efus00536
]
103289388 (COL4A4)
Exosome [BR:
efus04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103289388 (COL4A4)
Glycosaminoglycan binding proteins [BR:
efus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103289388 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103289388
NCBI-ProteinID:
XP_054578969
LinkDB
All DBs
Position
11:66525947..66634235
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AA seq
1684 aa
AA seq
DB search
MHMELGRCSFRWFKLLATKPWSLILIIFSMQLVYGSGKKFTPCGGRDCSVCQCFPEKGSR
GHPGPPGPQGPIGPLGPPGPIGIPGEKGMRGESGPPGAAGDKGDKGPTGVPGFPGLDGIP
GHPGPPGFRGKPGMNGCNGSRGDPGFPGERGAPGPEGPPGFPGEKGEKGNSVFILGGIKG
SQGDRGNPGPPGLPGSRGARGPAGPMGSPGEPGLPGPPGHPGSPGVKGNPGMGVKGQMGD
PGEVGQQGFPGPTLLVQPPDSCLYKGEKGVKGIPGMIGPPGPPGPKGEPGIGEKGEKGIP
GFPGPRGIPGSYGSPGFPGLKGEQGLFGTPGSFGFPGPKGDPGDRGYPGPPGVLTTPPLP
LKGPPGDPGLPGRYGEMGAVGFPGPPGPSGRPGETCPGMMGLPGPPGLPGHPGVPGEAGP
PARPDSAPGKPGDPGPPGLPGAPGRQGPPGSDVIYCSVGHPGPQGPKGKMGPPGRRGSKG
EKGNAGLCACKPGPIGSPGPPGLPGRQGSKGDLGLPGWPGERGHPGLPGAEGSPGPPGKP
GAPGPPGNKGEKGDMVVSRVKGRKGERGPDGPPGFPGQHGQDGWDGHAGANGDPGPPGDH
EDAGPGDQGVPGLPGPPGREGPRGPPGLGFPGPPGQKGQPGDPGCPGERGPDGVKGPKGD
TISCNVSYPGRPGPPGFDGPPGPKGFPGPQGAPGLRCFDGQKGRPGKPGISKIPGPPGLR
GDTGDPGFEGERGSSPVGPPGSPGSPGASGQKGIPGDPAYGHPGPPGKRGLTGMPGLKGL
RGDPGHPGPAGPAGMPGFPGLKGPKGREGSAGFPGVPGPPGHSCERGAPGSPGQPGLPGA
PGSPGAPGWKGQRGDMGPPGPAGMKGLPGDPGRPGTDGPLGPPGIPGPFGDDGLPGLPGP
KGPQGLPGMPGFPGERGKPGPKGHPGRKGEVGEKGWPGVLGDQGASGAKGERGPPGDEGE
MAIITKKGKTGDPGPPGDDGFPGEEGDKGHPGMPGRRGEPGRHGPPGLHRGEPGRDGQPG
PPGPPGPPGPPGLRGIIGFPGFPGDQGEPGYPGAPGLSGIDGTRGPKGNKGDPASQFGPP
GPKGEPGSPGCPGHLGAPGEKGLTGVQGPRGPPGRPGLPGSSGPSGCPGDKGMPGPMGHP
GETGDPGPRGLMGYPGIPGLPGIKGPAGLPGLNGLHGLKGQKGTKGASGLNGMGPPGPMG
MPGLKGETGDPGNPGISPPGLCGEKGPPGPPGRPGPPGPAGATGGPPKGCFPDPGQPGDQ
GPPGPNGPRGPPGPPGPPGSIDLLQGDPGDCGLPGPPGPRGPPGPPGPKGLPGCDGNNGQ
KGPMGFPGPQGPHGLPGSPGEKGVPGPPGRQGPPGPAGERGPPADLDACPRIPGLPGLPG
PRGPEGAMGPPGMRGPPGAGCKGEPGLDGRRGDDGIPGPPGPPGHGGDMGEAGCPGAPGP
PGPIGDPGPKGVGPGYLSGFLLVLHSQTDGEPTCPMGMPRLWTGYSLLYVEGQERAHNQD
LGLAGSCLPVFSTLPFAYCNIHQVCHYARRNDKSYWLASAAPLPMMPLSEEDIRPYISRC
AVCEAPAQAVALHSQDQSVPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDF
RAAPFLECQGRQGTCHFFANEYSFWLTAVKPHLQFSAAPSPETIKESQAQRQKISRCQVC
MKVS
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgcacatggagttaggaaggtgctctttcaggtggttcaagctcttagccacaaagccc
tggtcacttatacttattatcttttctatgcaacttgtatatgggagcggaaagaagttc
actccttgtggagggagagattgctctgtctgccagtgctttcctgaaaaggggtctcgg
ggtcacccgggaccaccagggccacagggtcctattggaccactgggaccgccaggaccc
attgggattccaggagagaaagggatgagaggggagagcggccctcctggagcagcaggg
gataaaggagataagggtcccactggtgttcctggatttccaggtttggatggtatacct
gggcacccagggcctcctggattcagaggcaaacctggcatgaatggctgcaatggctca
agaggtgatccagggtttccaggagaaagaggagctcctggcccagaaggccccccaggc
tttcctggggaaaaaggagaaaaaggaaattcagtgttcattttaggtggcattaaaggt
agtcagggtgacagagggaacccaggacctcccggcttaccaggatcaaggggtgctaga
ggaccagcaggcccaatgggatccccaggagagccggggttaccggggcctccgggccat
cctgggagtccgggtgtgaagggcaatcctggcatgggagtcaaggggcagatgggagac
ccgggtgaggttggccagcaaggttttcctggaccgaccctactggtacagccacctgat
tcttgtctctataaaggagaaaagggtgtaaaaggaatacctggaatgattggacctcca
ggacctccaggacccaagggagaacctggtattggggagaaaggagaaaagggcatccct
ggcttcccaggccctcggggtatccctggctcctatggatctccaggttttccaggatta
aagggtgaacaaggactatttggaactcctgggtcatttggatttcctggtccaaagggg
gatcctggagaccgcggatacccgggaccaccaggggtgttgacgactccacctcttcca
ctcaaaggtcctccgggggatccaggactccctggccgctatggagaaatgggggctgtt
gggttccccggtccccccggcccctctggtcgaccaggggaaacctgtccaggcatgatg
ggactccctgggccaccagggttacctgggcatccgggagttccaggggaagccggccct
cctgcgagacctgattccgctccaggaaaaccaggggacccgggaccacccggcctgccg
ggagcaccaggacgtcagggacctccgggatcagatgttatatattgtagtgtcggacac
cctggaccacaaggaccaaaaggcaaaatgggtcctccaggaagaagaggctcaaaagga
gaaaaaggaaatgcggggctctgtgcctgcaagcctggtcccataggctcaccaggccct
ccaggacttcctgggaggcagggaagtaagggagacttgggactccctgggtggcctgga
gaaagaggtcacccaggcctccctggtgctgaaggatctccagggccaccaggaaaacct
ggtgccccaggaccacctggcaacaaaggagaaaagggagacatggttgtatcaagagtt
aaaggacgcaaaggagaaagaggtcctgatgggcccccaggatttccagggcagcatgga
caagatggctgggatggacatgctggagcaaacggggatccaggacctccaggggatcat
gaagacgcaggcccaggtgatcaaggagttcctggactgccaggcccccctggcagagaa
ggaccaagggggcctccaggactgggatttcctggtccaccaggacaaaaggggcaacca
ggagacccaggctgcccaggcgagaggggccctgatggtgtgaagggtccaaaaggtgat
acaatttcttgtaatgtcagctaccctgggaggccaggccctccgggttttgatggacct
ccaggtccaaaaggatttccaggtcctcagggtgctcctgggctgaggtgttttgatggg
caaaaaggtcggcctggcaaaccaggaatatcgaaaatacctggtccacctggtctccgt
ggtgacacaggcgatccaggttttgaaggtgagaggggttcctctcccgtcgggccccca
ggctctcctggttcacctggagcgagtggtcagaaaggaatccccggagaccctgcatat
ggccacccagggcccccaggaaagaggggtctcacaggaatgccagggttgaaaggcctc
agaggcgacccaggacatccggggcctgcagggccagctggcatgcccggattcccaggt
ctcaaaggcccgaaaggcagagagggaagtgctgggtttccaggtgtccctggtccacct
ggccattcctgtgaaagaggcgctcccggatcaccagggcaaccaggactccccggggct
cctggcagtccaggtgccccaggttggaaaggacagcgaggagatatgggacctcctgga
ccagctgggatgaagggcctcccaggagaccccggaaggccagggacagatggaccccta
ggaccgccaggaatcccaggcccctttggggatgatgggctacctggtcttccaggcccc
aagggacctcaggggctgcctggcatgccaggttttccaggagagagagggaagcctggc
cccaagggacaccctggcagaaagggagaagtcggagagaagggctggcctggcgtcctg
ggagaccagggagcgagtggtgccaaaggagagagaggacccccaggagatgaaggagaa
atggctataattaccaagaaagggaaaaccggggatcctggacctcctggagatgatgga
ttcccaggagaagaaggtgataaaggccatcctgggatgccagggagaagaggggagcca
ggaagacacgggccacctgggcttcacagaggagagcctggtagagatgggcagccgggg
cctccgggacccccaggccctccgggcccacctgggctcagagggatcattggttttccg
ggatttccaggtgatcagggtgagccgggttatccaggggcccctggactttcaggaatt
gatggaacgagaggacctaaaggaaacaaaggggatcctgcaagtcagtttggcccaccc
ggtccaaagggtgagccaggcagccctggatgtccagggcatttaggagctcccggagag
aagggcttgaccggtgttcaagggcccagaggaccaccaggaagaccaggactgcccggc
tcctccggaccatcagggtgtccaggtgataaagggatgcctgggccaatgggacatcca
ggagaaacaggggaccctggaccaagaggcctcatggggtatccagggataccaggtctt
ccgggaataaaaggtcccgccgggttacctggcctgaatggcttgcatggtttaaagggt
cagaaaggaaccaaaggagcttcaggtttgaatggaatgggcccacccggcccaatggga
atgcctgggctgaaaggggagacaggtgaccccgggaacccaggaatttctcctccaggc
ctttgtggagaaaaaggcccgccaggccctccagggagacctggaccacctggtcctgca
ggtgccacaggaggacctcctaagggttgttttcctgaccccggtcagcctggagatcaa
ggacctcctggccccaatggtccaagaggaccccccgggcctccagggccccctgggagc
attgaccttctgcaaggggatccaggagactgtggtctgccagggcctccaggtccccgg
ggcccgccaggccctccaggacccaaaggcctcccaggatgtgatggaaacaatggccag
aaaggaccaatggggttcccggggccacaggggccacatggacttccagggtcacctgga
gagaagggtgtacctggccctccaggtagacaaggcccccctgggcctgcaggcgaacgg
gggccacctgcagatttggatgcctgcccccgaatcccggggcttcctgggttaccaggc
ccaagaggaccagaaggagctatggggccccctggaatgagaggccctccgggagcaggg
tgcaaaggagagcccgggctggatggcaggaggggcgatgatggcatcccagggccgcct
gggcctccgggacacggaggtgacatgggagaagccggctgccctggagcaccaggccct
cctgggcccattggggatcctgggcccaaaggggtcggccctggatacctcagtggcttc
ctcctggttctccacagtcagacggatggagagcccacctgccccatgggcatgcccagg
ctctggacgggctacagtctgctctacgtggaaggacaggagagagcacacaatcaggac
ctcggtctggcggggtcttgcctcccggtgtttagcacactgccctttgcctactgcaac
atccaccaagtgtgccactacgcccggaggaacgacaagtcctactggctggccagcgcc
gcgcccctgcccatgatgccgctgtcggaggaggacatccgcccctacatcagccgctgt
gctgtgtgcgaggccccggctcaggcggtggcgctgcacagccaggaccagtccgtgccc
ccgtgcccgcgggcctggcggagcctctggatcgggtactccttcctcatgcacacaggt
gctggggaccaaggaggagggcaggccctcatgtcacccggcagctgcctggaagatttc
cgagcagctcccttcctcgaatgccaaggccggcagggaacttgccacttctttgcaaac
gagtacagcttctggctgacggcggtcaaaccacacttgcaattttccgcagcaccatcg
ccggaaaccataaaggaaagccaggcccagcgccagaaaatcagcaggtgtcaggtctgc
atgaaggttagctag
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