Eptesicus fuscus (big brown bat): 103289629
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Entry
103289629 CDS
T09083
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103289629 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
efus01009
]
103289629 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efus04515
]
103289629 (PCDH20)
Protein phosphatases and associated proteins [BR:
efus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103289629 (PCDH20)
Cell adhesion molecules [BR:
efus04515
]
Cadherins
Protocadherins
103289629 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
103289629
NCBI-ProteinID:
XP_008143743
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All DBs
Position
8:complement(31031097..31036364)
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AA seq
955 aa
AA seq
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MRGRGGARRSRALAVSWRPATWHPRLDMGRLSRPSSCSTSRRNLPPLFLFLLFVGPFNCL
ASYSRATELLYSLNEGLPAGVLIGSLAEDLRLAPRAAGRLDPQPQPQPPERARAEPSPPL
SFSLASRGLSGQYVTLDNRSGELHTSAREIDREALCLEGGGGAAWGDSIAISSSPSSDSC
LLLLDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAMD
PDIGTNGVQTYRLLDYHRVFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGG
SPPLLGSATLTIGISDINDNCPLFADSQVNVTVYGNATVGTPIAAVQAVDRDLGTNAQIT
YSYSQKVPQASKDLFHLDETTGVIKLSSKIGGSVLQTHRLTILANGPGCIPAVITALVSI
IKVTFRPPEIVPRYIANEIDGIVYLKELEPVNTPIAFFTIRDPEGKYQVNCYLDGEGPFR
LSPYKPYNNEYLLETTKPMDYELQQLYEIAVVAWNSEGFHVKKMIKVQLLDDNDNAPVFL
QPLIELTIEENNAPHAFLTKLHATDADSGERGQVSYFLGHDAPSYFSLDSVTGILTVSTQ
LDREEKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYG
EIGVISVTDADAGRNGWVALSVLNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVD
GGEPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGM
NAVIAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLYST
VMVNLFVNDTVSNESYIESLLRKEPDINIEEKEPQISIEPTHRKVESVSCMPTLVALSVI
SLGSITLVTGMGIYICLRRGKKHPREDESLEVQIPLKGKIDLHMRERKPMDISNI
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagggggtgcgcgccgctcgcgggccctggcagtgagctggcgcccggcg
acctggcacccgcgcctggatatggggcggctaagtcgtcccagcagctgcagcaccagc
cggagaaacctgccgcctctgtttctgtttctcctcttcgtgggacccttcaactgcctc
gcgagttacagccgggccacggagctgctgtacagcctgaacgagggcctgcccgccggg
gtgctcatcggcagcctggccgaggacctgcgcctggcgccccgcgccgcgggccggctg
gacccgcagccgcagccgcagcctccggagcgcgcccgcgccgagcccagccctcctctc
tccttcagcctggcctcccggggactgagtggccagtacgtgaccctagacaaccgctct
ggggagctgcacacttctgcccgggagatcgaccgcgaggccctgtgtcttgaaggaggt
ggaggggctgcctggggcgacagcattgccatctcctcctccccttcttctgactcttgt
cttttgcttctggatgtgctggtcctgcctcaggaatactttcggttcgtgaaggtgaaa
atcgccatccgggacatcaatgacaacgccccgcagttccccgtttcccaaatctcagtg
tgggtcccagaaaatgcacctgtaaacacccgactggccatcgagcatcctgccatggac
ccagacataggcaccaacggggtgcagacctaccgcctactggactaccaccgtgtgttc
accctggacgtggaggagaatgagaatggggagcgcacgccctacctaatcgtcatgggc
ctgctggacagggagacccaagaccagtatgtgagcatcatcatagctgaggatggtggg
tctccaccactgctgggcagtgccaccctcaccattggcataagtgacatcaacgacaac
tgccctctgttcgcggactcacaggtcaatgtcacagtgtatgggaacgcgacggtgggc
acaccgattgcagctgtccaggctgtggatagagacttggggaccaacgctcagatcacc
tactcttacagccagaaagttccacaagcatccaaggatttattccacctggatgaaacc
actggcgtcatcaaactttccagtaagatcggggggagtgtcctgcagacacacaggctc
accatcctggctaacgggccaggctgcatccctgctgtgatcactgccctggtgtccatt
atcaaagtcactttcagaccacctgaaatcgtcccccgttacatagcaaacgagatagac
ggcatcgtgtacctgaaagaactggaacctgttaacactccgattgctttcttcaccata
agagatccagaaggcaaataccaggtgaactgctatctggatggtgaagggccgtttagg
ttatcgccctacaaaccatacaataacgaatatttgctagaaaccacaaaacccatggat
tatgagctacagcagttgtatgaaatagctgtggtggcctggaattctgagggatttcac
gtcaaaaaaatgattaaagttcaacttttagatgacaatgacaatgcccctgttttcctt
caacccttgatagaactaaccatagaagaaaacaatgcaccccatgccttcttgactaag
ttgcatgctacagatgctgacagtggtgagagaggccaagtttcgtattttctgggacat
gatgcgccctcatatttttccttagacagcgtcacaggaattctgacagtttctactcag
ctggaccgagaagagaaagaaaagtaccggtacacagtcagagctgttgactgtgggaag
ccacccagggaatcagtagccacggtggctctcacagtgttggataaaaatgacaacagc
cctaggttcatcaacaaggacttcagcttttttgtgccagaaaactttccaggatatggt
gaaattggagtaattagtgtaacggatgctgatgctggccgaaatggatgggtggctctg
tccgtgttgaaccagagtgatatttttgtcatagacacaggaaagggcatgctgagagct
aaagtctctttggacagggagcagcaaagctcctatactttgtgggtggaagctgttgat
ggaggtgagcccgccctctcttctaccgcaaaaatcacaattctcctccttgatatcaat
gacaaccctccgcttgttttatttcctcagtctaatatgtcttatctgttggtactacct
tctactctcccgggttccccagtgacagaagtctatgctgttgacaaagacacgggcatg
aatgctgtcatagcctacagcatcatagggagaagaggtcctaggcccgagtcctttagg
attgaccctaaaactggcaacattactttggaggaggcactgctgcagacagattatgga
ctccatcgtttactggtgaaagtgagtgatcatggttaccctgagcctctctattccacg
gtcatggtgaacctatttgttaatgacactgtcagtaatgagagctacattgagagtctt
ttaagaaaggaaccggacattaatatagaggagaaagagccacagatctcgatagaaccc
acccataggaaagtcgaatctgtgtcctgtatgcccaccttagtagccctgtctgtaata
agcttgggttctatcacactggtaacagggatgggcatatacatctgcttaaggagaggg
aaaaagcatcccagggaagatgaaagtttggaagtacaaattccactaaaaggaaaaatt
gacttgcacatgagagagaggaaaccgatggatatttctaatatttga
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