Eptesicus fuscus (big brown bat): 103289976
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Entry
103289976 CDS
T09083
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
efus
Eptesicus fuscus (big brown bat)
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efus03000
]
103289976 (RC3H1)
04121 Ubiquitin system [BR:
efus04121
]
103289976 (RC3H1)
Transcription factors [BR:
efus03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
103289976 (RC3H1)
Ubiquitin system [BR:
efus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103289976 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
103289976
NCBI-ProteinID:
XP_008144092
LinkDB
All DBs
Position
22:complement(19425988..19468907)
Genome browser
AA seq
1125 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPVTLCSGVEDTKHYDEARKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLGPRRPLSASMGQLNEVGLPSAAILPDE
GAVDLPNRKPPALPNGIVSAGNTVTQLIPRGTDPSYDSTLKSGKMDHLSSSAPGSPPDLL
ETVPKSIPHPVPPRGPSDLPPMPVTKPMQMVPRGSQLYPAQQADVYYQDPRGAAPPFEPA
PYQQGVYYTAPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQQYPPMYP
PHYDGRRIYPAQSYPREEIFRDSPIPIDIPPAAVPSYVPESRERYQQVEGYYPVAPHPTQ
IRPSYIREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPPTFH
QEELLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVAAGSVEMMNVESKG
MRDQRLDHQRRATETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMAPQGAPTK
SVNISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLPSADREQLR
LELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLAAQSQPPPPPPKWPGMISSEQLSLE
LHQVEREIGKRTRELSLENQCSLDMKSKLNTSKQAENGQPEPQTKVPTEDLTLTFSDVPN
GSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctttcctgcccgatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccggaaggcttgcccatttgaccagaccactatcaatacagac
attgagctccttcccgtgaactcagcgttgcttcagctagtgggtgctcaggtccctgag
cagcagcctgttacattgtgtagtggggttgaagatacaaagcattatgacgaagccagg
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagcgctagaggagtgggt
ctgaatagcactactcagagtgttctgagtcgcccaatgcagaggaagctggtgactctg
gtccactgccaactagtggaagaagaaggcaggattcgtgccatgcgagcagctcgatct
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcagcaactctct
tctaatctttgggcagcagtaagggctcggggctgccagttccttggaccagcaatgcag
gaggaagctctaaagttggttctcctggctttggaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttagagccacggttccctcaagcctctaaaact
agcattgggcatgttgtccagctcctgtatagagcctcctgtttcaaggtcaccaaacgt
gatgaagactcctctttgatgcaactaaaagaagaattcaggacctatgaagctctgagg
cgagagcatgactcccagatagttcagattgctatggaagcaggcttacgaatcgcacca
gaccagtggtcctctttgctgtatggagaccagtctcacaaatctcatatgcaatccatt
attgacaagttgcagactccagcctcttttgcacaaagtgtccaggaactaacaattgct
ctccagcgaactggagatccagcaaatttgaaccgactaagaccccatttggagctatta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatgga
ttggttgctgtgcgtacagtggtacatgggctggttgattacatccagaaccacagtaag
aaaggagcggatcaacagcagcctccacagcatagcaaatataagacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcccag
gaggaactggaaaaatttcgcaaaatgaacaaacgcctgggtcccagaagacccctgagt
gcctctatgggtcagcttaatgaggtgggcctgccttcagcagctatccttcctgacgaa
ggtgcggtggatctgccgaacagaaaaccccctgctctgcccaatgggattgtgtcagca
gggaacacagtaacgcagctgattccacgaggaacagaccccagctacgattctactctg
aaatcaggaaagatggatcatctgagcagcagcgcccctggatcccctcctgacctgcta
gaaactgtccccaagagtatcccacatcctgtacctccaagggggccatcagacctgcct
cctatgcctgtcactaagccaatgcagatggtaccgcggggttcgcagttatatcctgcc
cagcaggcagacgtgtattatcaggatcctcgaggagccgctccaccatttgaaccagca
ccttatcagcagggtgtgtactacactgcgccacagtgtgtgtcccgctttgtccgacct
ccaccatctgctcctgagcccggtcctccctacttggatcattacccaccctacctccaa
gatcgtgttgtaaactctcaatatggcacacagccacaacagtacccacctatgtacccg
ccacactatgatggccgtcgaatataccctgctcagtcttatccaagagaggagattttc
cgagacagtcctatacctattgatattccacctgcagcagtaccatcctatgtaccagaa
tccagagaaagataccaacaggtggagggttactacccagtggctcctcatccaactcag
atcagaccttcgtacatcagagagcctccttatagccggcttcctcctcctccccagccc
caccctagtctagatgagctacatcgaagacgaaaggaaataatggcccaattagaggaa
aggaaggttatctctccacctccttttgcgccttcaccaacattgccgcctaccttccat
caagaggaattattggatgaagacttgaaggtagctgggaaatataagggaaatgattat
agccagtactctccctggtcatgtgacaccatcggctcctacattggaaccaaagatgca
aaacccaaagatgctgtggcagcagggagtgtggaaatgatgaatgtggagagtaaagga
atgagagaccagcggttggatcatcagagaagagcaacagaaaccagtgatgatgacctc
atcccatttggagaccgaccaacagtatctcggtttggtgccatctctcgaacttccaaa
acaatatatcagggtgctggcccaatgcaggctatggcacctcagggagctcccacaaaa
tctgttaacatttcagattacagtccatatggaacccatggtggctggggaggctctccc
tactcacctcatcaaaacataccttctcagggacacttcagtgagagggagaggatatcc
atgtcagaagtggccagtcatggcaaaccccttccatctgctgacagggaacagctacga
ctagaattgcaacagctaaaccatcaaattagccaacagactcagctacgtggactagag
gctgttagtaacaggctggtgttgcagagggaggtgaacaccctggcagcccagtcacag
ccaccaccaccacctccaaaatggcctggaatgatctcaagcgagcagttgagcttggaa
ctgcaccaggtggaaagggaaatcgggaagagaacccgggaactgagtttggagaaccag
tgttctctggatatgaaaagcaaattaaatacaagtaagcaagcagaaaatggacaacca
gaaccacaaactaaggttccaaccgaggaccttacattgacattcagtgatgtaccgaat
ggatcagccttgacacaagagaatatcagcctcctatcaaacaagaccagctctctgaac
ctatcagaggaccctgagggaggaggagacaacaatgactcccagcgatcaggagttaca
cccagttctgctccctaa
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integrated database retrieval system
