Eptesicus fuscus (big brown bat): 103290564
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Entry
103290564 CDS
T09083
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103290564 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efus03041
]
103290564 (SF3B1)
03036 Chromosome and associated proteins [BR:
efus03036
]
103290564 (SF3B1)
Spliceosome [BR:
efus03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103290564 (SF3B1)
Complex B
103290564 (SF3B1)
Complex C
U2 SnRNP specific factors
103290564 (SF3B1)
Chromosome and associated proteins [BR:
efus03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103290564 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
103290564
NCBI-ProteinID:
XP_008144718
LinkDB
All DBs
Position
11:87394867..87428568
Genome browser
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattgccaagactcacgaagatatcgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatatatggtggaagtgacagcagatttgctgggtacgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgctcggtcagaag
aagccaggatatcatgcccctgtggcattgcttaatgatataccacagtcaacagaacag
tatgatccatttgctgagcaccgacctccaaagattgctgaccgggaagatgaatacaaa
aagcacaggcggaccatgataatttccccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctagaacttacatggatgtaatgcgagagcagcat
ttgactaaagaagagagagaaattaggcaacaactagcagaaaaagctaaagctggagaa
ctgaaagtcgtcaatggagcagcagcgtcccagcctccctcaaaacgaaaacggcgttgg
gatcaaacagctgatcagactcctggtgccactcccaaaaagctgtcaagttgggatcaa
gcagagacccctggacataccccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacaccaagtcac
acaccagcgggagctgctactcctggacgaggtgatacaccaggccatgcgacaccaggc
catggaggcgcaacttccagtgctcgtaaaaacagatgggatgagacccccaagacagaa
agagatactcctgggcatggaagtggatgggctgagacgcctcgaacagatcgaggtgga
gattcaattggtgaaacacccactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagtcagatgggtggaagcactcctgttctgacccctgggaaaacaccaatt
ggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcgttgggagagagaaattgacgagagaaatcgcccactttct
gatgaagaattagatgctatgtttccagaaggatataaggtacttcctcctccagctggt
tatgttcctattcgaactccagctcgaaagctcacagccactccaacacctttgggtggc
atgactggtttccacatgcaaactgaagatagaactatgaaaagtgtcaacgaccaacca
tctggaaatcttccctttttaaaacctgatgatattcagtactttgataaacttttggtt
gatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaaactg
cttttaaaaattaagaatggtacacctccaatgagaaaggctgcattgcgtcagatcact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctctactgatg
tctcctacacttgaggatcaagaacgtcatttacttgtcaaagttattgatagaatatta
tacaaacttgatgacttagttcgaccatatgtgcataagatccttgtggtcattgaacca
ttgctgattgatgaagattactatgctagagtggaaggccgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgagacccgatatagataatatg
gatgaatatgttcgtaacacaacagctagagcttttgctgttgtagcttctgccctgggc
attccttcactgttgcccttcttaaaagctgtgtgcaaaagcaagaagtcctggcaagcg
agacacactggtattaagattgtacagcagatagctattcttatgggctgtgccatctta
ccacatctgagaagtttggttgaaatcattgaacacggtcttgtggatgagcagcagaaa
gttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccttacggt
atcgaatcttttgattctgtgttaaagcctctatggaagggtatccgccagcacagagga
aagggtctggctgccttcttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattcgagaattccagtctcct
gatgaagaaatgaagaaaattgtgctgaaggtggtaaagcagtgctgtgggacagatggt
gtagaagcaaactacattaaaacagagattcttcctcccttttttaaacacttctggcaa
cacagaatggctttagatagaagaaattatcgacagttagttgatactactgtggagttg
gctaacaaagtaggagcagcagaaattatatccaggatcgtggatgatctgaaagatgaa
gctgaacagtacagaaaaatggtaatggagacaattgagaagattatgggcaacttggga
gcagcagatattgatcacaaacttgaagaacaactgattgatggcattctttatgctttt
caagaacagactacagaggactcagtaatgttgaacgggtttggcacagtggtcaatgct
cttggcaaacgggtgaaaccttacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatccgcaaaagttaggcaacaggcagctgacttgatctctcgaactgctgtt
gttatgaagacttgccaagaggaaaaattgatggggcacttgggtgttgttttgtatgag
tatttgggtgaagagtaccctgaagtattgggcagcattcttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgactccaccaattaaagatctgctgcctagactc
actcccatcttaaagaacaggcatgaaaaagtacaagagaattgtattgatcttgttggg
cgtattgctgacaggggagctgaatatgtgtcagcaagggagtggatgaggatttgcttt
gagcttttggagctcttaaaagctcacaaaaaagctattcgtagagccacagtcaacaca
tttggttatattgcaaaggccatcggccctcatgatgtgttggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgtcgct
gaaacgtgttcacccttcacagtgctccctgccttaatgaatgaatacagagttcctgaa
ctcaatgttcaaaacggagtgttaaagtcactctccttcttgttcgaatatatcggtgaa
atggggaaggactacatttatgctgtaacaccattacttgaagatgctttaatggataga
gatcttgtacacagacagacggctagtgcggtggtgcaacacatgtccctgggggtttat
ggatttggttgtgaagattcgctgaatcacttgttgaactatgtatggcccaatgtgttt
gagacctctccccatgtgattcaggcagttatgggagccctggagggcttgagagttgct
attggaccatgtagaatgttgcagtattgtttacagggtttgtttcacccagcccggaag
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaactt
gactatatcttataa
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