Eptesicus fuscus (big brown bat): 103292198
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Entry
103292198 CDS
T09083
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
efus04142
Lysosome
efus04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
103292198 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103292198 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
103292198 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
efus02000
]
103292198 (NPC1)
Transporters [BR:
efus02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
103292198 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Folate_rec
Motif
Other DBs
NCBI-GeneID:
103292198
NCBI-ProteinID:
XP_054580496
LinkDB
All DBs
Position
12:93325496..93365069
Genome browser
AA seq
1276 aa
AA seq
DB search
MRARGPALGLLLLLLLCPAQVFPQSCVWYGECGIASGDKRYNCEYSGPPKPLPKDGYDLV
QELCPGLFFGSVSLCCDVQQLRTLKDSLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQ
FLNVTETEEYVDPVTHENKTNVKELQYYVGESFANAMYNACRDVEAPSSNDKALGLLCGK
EAAACNATNWIEYMFNKDNGQAPFTITPVFSDLPAHGMEPMNNATKGCAEPVDEVTGPCS
CQDCSAVCGPRPQPPPPPVPWRIWGLDAMFVIMWATYMAFLLMFFGAVFAVWCYRKRYLV
SEYTPIDSSIAFPINVSDTGEASCCDPLGAAFEGCLRRLFTRWGSFCVRNPGCVIFSSLA
FIAACSSGLVFMRVTTSPVDLWSAPSSQARLEKEYFDTHFGPFFRTEQLIIQAPHTDVHI
YEPYPSGSDVPFGPPLDKGILHQVLDLQTAIEHITASYNNETVTLQDICLAPLSPYNENC
TVLSVLNYFQNSHSVLDHAIGDDFFTYADYHTHLLYCVRAPASLNDTSVLHDPCLGTFGG
PVFPWLVLGGYDDQNYNNATALVMTFPVNNYYNDSEKLQRALAWEREFINFVKNYKNPNL
TISFTAERSIEDELNRESESDIATVVTSYAVMFLYISLALGHIRSCSRLLVDSKVSLGIA
GIFIVLSSVACSLGIFSYVGVPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQGET
LDQQLGRVLGDVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGMAVLIDFLLQITCF
VSLLGLDAKRQENNRLDILCCVRGEDGTGLQASESCLFRFFRDAYSPLLLKAWMRPIVMA
VFVGVLSFSIAVLNKVEIGLDQSLSMPEDSYVTDYFRSLSQFLHAGPPVYFVVEEGLDYR
SLEGQNLVCGGMGCNNDSLVQQLFDAAELDAYTRIGFAPSSWIDDYFDWVKPQSSCCRVH
SGSGQFCNASVADPGCIRCRPLTPEGKQRPQGGDFMKFLPMFLSDNPNPKCGKGGHAAYG
SAVNILGNDTGVGATYFMTYHTVLQTSADFIDAMRKARLIAGNISQTMSQGGSNYRVFPY
SVFYVFYEQYLTIVEDTVFNLCVSLGAIFLVTVVLLGCELWSAVIMCVTIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCAHITRAFTVSAKGSRVARAEEALSHMGSSVFSG
ITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKAKSL
ATQQRCRGTEREQLSF
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgcgcggcccggccctgggcctcctgctgctgctgctgctgtgcccggcgcag
gtgtttccgcagtcctgcgtctggtatggagagtgtgggattgcttctggagataagagg
tacaactgcgagtattccgggcccccgaagccactgccaaaggacgggtatgacttagtg
caggaactctgtccggggctcttctttggcagcgtcagcctctgctgtgatgtgcagcag
ctccggaccctgaaggacagcctgcagctgcctctccagtttctgtccagatgtccatcc
tgtttttataacctgatgaacttattttgtgagctgacatgtagccctcgacaaagtcag
tttctgaacgttacagaaaccgaagagtacgtggatcctgtgacccacgagaataaaaca
aacgtaaaggaattgcagtactatgttggcgagagttttgccaatgccatgtacaacgcc
tgcagggacgtggaggccccctcgagcaacgacaaggccctggggctcctgtgcgggaag
gaggccgcagcctgcaacgccaccaactggatcgagtacatgttcaacaaggacaacggc
caggcccccttcaccatcactcccgtcttctcagatctcccggcccacgggatggagcca
atgaacaacgccaccaagggctgtgccgagcccgtggacgaggtcaccgggccctgcagc
tgccaggactgctcggccgtgtgcggcccccgaccccagccgccgccccctcccgtcccc
tggagaatctggggcttggacgccatgttcgtcatcatgtgggccacctacatggcgttt
ttgctcatgttttttggagcagtttttgccgtgtggtgctatagaaagcggtacttggtc
tccgagtacacccccatcgacagcagcatagcgttcccgataaatgtcagcgacacaggg
gaggcctcctgctgcgacccgctcggtgccgcattcgagggctgcttgaggcggctcttc
accaggtggggctccttctgcgtccgaaaccccggctgcgtcattttctcctccctggcc
ttcatcgccgcctgctcctcgggcctggtgttcatgcgcgtcaccaccagcccagtggac
ctgtggtcggcccccagcagccaggcgcgcctggagaaggagtactttgacacccacttc
gggcctttcttccgcacggagcagctcatcatccaggcgccacacaccgacgtgcacatt
tacgagccgtacccctcggggtccgacgtgcccttcggacctccactggacaaagggatt
ctgcaccaggttcttgacttacaaacagccattgaacacatcactgcctcttacaacaac
gagaccgtgaccctccaggacatctgcttggccccgctctccccgtacaacgagaactgc
accgtcctgagtgtgttaaactacttccagaacagccactccgtgctggaccacgcgata
ggggacgacttcttcacctatgccgattaccacacgcacctgctgtactgtgtccgggcc
cctgcctcgctgaacgacaccagcgtgctgcacgacccctgcctggggacgtttgggggg
cccgtgttcccgtggctggtgctgggaggctatgacgatcagaactacaataacgccacc
gccctggtgatgacctttcctgtcaataattactacaatgactcggagaagctccagcgg
gccctggcctgggaaagagagttcattaattttgtgaaaaactacaagaacccaaatctc
accatttccttcactgctgagcgaagtatcgaagatgaattgaaccgtgagagtgaaagt
gacatcgccaccgtggtgaccagctatgccgtcatgtttctgtacatctccctggccctg
gggcacatccggagctgcagcaggctcctggtggattccaaggtctccctgggcatcgca
ggcatctttatcgtgctgagctcggtggcctgctcgctgggcatcttcagctacgtcggg
gtccccctcaccctcattgtgatcgaggtcatccccttcctggtgctggccgtcggggtg
gacaacatcttcattctggtccagacctaccagagagatgaacgtcttcaaggagagacc
ctggaccagcagctgggccgggtcctgggagacgtggcccccagcatgttcctgtcgtcc
ttctccgagacggtggccttcttcttaggagccctgtcggtgatgcccgctgtgcacacc
ttctcgctgtttgccgggatggccgtcctcatcgacttcctgctccagatcacctgcttc
gtgagtctcctggggctggatgcgaagcgtcaggagaacaaccggctggacatcctgtgc
tgtgtccgcggcgaggatggcaccggcctccaggcctccgagagctgcttgttccgcttc
ttccgagacgcctactccccgctgctgctcaaggcctggatgcggccgatcgtgatggca
gtgtttgtgggcgttctctccttcagcatcgccgtcctgaacaaggtggaaattggattg
gatcagtctctttcgatgccagaagactcctacgtgacggactatttcaggtccctcagc
cagttcctgcacgcaggcccgcccgtctacttcgtggtggaggagggactggactacagg
tccctggaggggcagaacctggtgtgcgggggcatgggctgcaacaacgactcgctggtg
cagcagctgttcgacgcggccgagctggacgcctacacccggatcggcttcgccccctcg
tcctggatcgatgactactttgactgggtcaagccgcagtcctcgtgctgccgggtccac
agtggctccgggcagttctgtaacgcctcagtggccgaccctggctgcatccgctgcagg
cctctgactcccgagggcaaacagcggccccaggggggagacttcatgaagttcctgccc
atgttcctctccgacaacccgaaccccaagtgtggcaaagggggccatgctgcctacggg
tcggccgttaacatcctgggcaatgacaccggtgtgggcgccacctacttcatgacctac
cacacggtgctccagacctctgccgacttcatcgacgccatgagaaaggcccggctcatt
gctggcaacatctcccagaccatgagccagggaggaagcaactaccgcgtgtttccatac
agtgtgttctacgtcttctacgagcagtacctgaccatcgtagaggacaccgtcttcaac
ctctgcgtgtccctgggggccatcttcctggtgactgtggtgctgctgggctgcgagctg
tggtctgcggtgatcatgtgcgtcaccatcgccatgatcctggtcaacatgtttggcgtc
atgtggctgtggggcatcagcctgaacgcggtctccctggtcaacctggtcatgagctgc
ggcatctcggtggagttctgcgcccacatcaccagggccttcacagtgagcgccaagggg
agccgcgtggcgcgggcagaggaggcgctctcccacatgggcagctccgtattcagtgga
atcacacttacaaaatttggagggattgtggtgttggcctttgccaagtctcaaattttc
cagatattttacttcaggatgtacttagctatggtgttactgggagccacgcacgggttg
atcttccttccggtcctcctcagctacatcggaccatccgtaaataaagccaaaagcctg
gccacgcagcagcggtgcagaggcacagagagagagcagctcagtttctag
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