Eptesicus fuscus (big brown bat): 103292309
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Entry
103292309 CDS
T09083
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03015
mRNA surveillance pathway
efus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103292309 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
103292309 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103292309 (PABPC1)
03041 Spliceosome [BR:
efus03041
]
103292309 (PABPC1)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103292309 (PABPC1)
mRNA cycle factors
Stress granule specific factors
103292309 (PABPC1)
Spliceosome [BR:
efus03041
]
Complex C
Other components
Complex C specific factors
103292309 (PABPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_5
RBD_RDR6
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
103292309
NCBI-ProteinID:
XP_054564224
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All DBs
Position
19:complement(12971049..12990211)
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AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccctatggcctcgctctacgtgggggacctccacccc
gacgtgaccgaggcgatgctctacgagaagttcagcccggccgggcccatcctctccatc
cgggtctgcagggacatgatcacccgccgctccttgggctacgcgtatgtgaacttccag
cagccggcggacgcggagcgtgctttagacaccatgaattttgatgttataaagggcaag
ccagttcgcatcatgtggtctcagcgtgatccatcacttcgcaaaagtggagtgggcaac
atattcattaaaaatttggacaaatccattgataataaagcactgtatgatacattttct
gcttttggtaacatcctttcatgtaaggtggtttgtgatgaaaatggctccaagggttat
gggtttgtacattttgagacacaggaagcagctgaaagagctattgaaaaaatgaacggg
atgcttctaaatgatcgtaaagtgtttgttgggcgatttaagtctcgtaaagaacgagaa
gcagaacttggagctagggcaaaagagttcaccaatgtttacatcaagaattttggagaa
gacatggatgatgagcgccttaaggatctctttggcaagtttggacctgccttaagtgtg
aaagtaatgacagatgaaagtggaaaatccaaaggttttggatttgtaagcttcgaaagg
catgaagatgcacagaaagctgtggatgagatgaatggaaaggagctcaatggaaaacaa
atttacgttggccgagctcagaaaaaagtggaacggcagacggaacttaagcgcaaattt
gaacagatgaagcaagataggatcaccagataccagggtgttaacctttatgtgaaaaat
cttgatgatggtattgacgatgaacgtctccggaaagagttctctccatttggtacaatc
actagcgcaaaggttatgatggagggtggtcgcagcaaagggtttggttttgtatgtttc
tcctccccagaagaagccactaaagcagttacagaaatgaatggtagaattgtggctacc
aaaccattgtacgtagctttagctcagcgcaaagaagagcgccaggctcacctcactaac
cagtatatgcagagaatggcaagtgtgagagctgtgcccaaccccgtaatcaacccctac
cagccagcacctccttcaggttacttcatggcagctatcccacagactcagaaccgtgct
gcatactatcctcctagccaaattgctcaactaagaccaagtcctcgctggactgctcag
ggtgccagacctcatccattccaaaatatgcccggtgctatccgcccagccgctcctaga
ccaccatttagtactatgagaccagcttcttcacaggttccacgagtcatgtccacacag
cgtgttgctaacacgtcaacacagacaatgggtcctcgtcctgcagcggctgctgctgca
gctactcctgctgtccgcaccgttccacagtataaatacgctgcaggagttcgcaatcct
caacaacatcttaatgcacagccacaagttaccatgcagcagcctgctgttcatgtacaa
ggtcaggagcctttgactgcttccatgttggcatctgcccctcctcaagagcaaaagcaa
atgttgggtgaacggctgtttcctctcattcaagccatgcaccctactcttgctggtaaa
atcactggcatgctgttggagatcgataattcagaacttcttcatatgcttgagtctcca
gaatctcttcgttctaaagttgatgaagctgtagctgtactacaagcccaccaagctaaa
gaggctgcccagaaagcagttaacagtgccaccggtgttccaactgtttaa
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