Eptesicus fuscus (big brown bat): 103294996
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Entry
103294996 CDS
T09083
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103294996 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103294996 (XAB2)
03041 Spliceosome [BR:
efus03041
]
103294996 (XAB2)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103294996 (XAB2)
Spliceosome [BR:
efus03041
]
Complex B
Other components
Prp19-related factors
103294996 (XAB2)
Complex C
103294996 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_NPHP3
TPR_1
Motif
Other DBs
NCBI-GeneID:
103294996
NCBI-ProteinID:
XP_028016232
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All DBs
Position
6:6216952..6247768
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AA seq
855 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
VDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATQAVEPAQQYEMFNIYIKRAAEIYGVTHTRSIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAEHDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcatggcgcgactttcgcggcaggagcggccggaccttgtctttgatgaagaa
gacctcccctatgaggaggaaattatgcggaaccagttttctgtcaaatgctggctccgc
tacattgagttcaagcagggggccccgaagcccaggctcaatcagttgtacgagcgagcg
ctgaagttgctgccctgcagctacaaactctggtaccgctacctgaaggcacgcagggca
caggtgaagcatcgctgtgtgactgatcctgcctatgaagatgtcaacaactgccacgag
agggcctttgttttcatgcacaagatgccacgtctatggctagattattgtcagttcttg
gtggaccaaggtcgcatcactcacacgcgccgcactttcgaccgtgccctccgggcgctg
cccatcacacagcactcccgtatttggcctctgtacttgcgcttcctgcgctcacaccca
ctacctgagacagccgtgcggggctaccggcgcttcctcaagctgagccccgagagcgca
gaggaatacatcgagtacctcaagtcaagtgaccggctggacgaggctgcacagcgcctg
gccaccgtggtgaatgatgagcgcttcgtctccaaggctggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccggacaaggtgcagtcgctcaacgtg
gacgccatcatccgagggggccttacccgcttcacagaccagctgggcaagctctggtgt
tcactggccgactactacatccgcagtggccattttgagaaggctcgggacgtgtatgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgtttgacagctatgcc
cagttcgaggagagcatgattgcagcgaaaatggagaccacctcggagctggggcgggaa
gaagaggatgacgtggacttggagctgcgcctggcccgctttgagcagctgatcagtcgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccgcaccatgtccatgagtgg
cacaagcgtgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacggag
gctgtgcagacagtggaccccttcaaggctacgggcaagccccacacgctctgggtggcc
tttgccaagttttatgaggacaatgggcagctggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaagtggatgacctggcaagtgtgtggtgcgagtgtggt
gagctggagctccggcacgagaattacgaccaggccttgaggctgctgcggaaggcaaca
gcactgcccgcccgccgggctgagtattttgatggctcggagcctgtgcagaaccgtgtg
tacaaatcattaaaggtgtggtccatgcttgccgacttggaggaaagccttggcaccttt
cagtctaccaaggctgtgtatgaccgtattctggacctgcgcatcgctaccccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgtggcatctcgctgttcaagtggcccaatgtgtctgacatctggagcacctat
ctgaccaaattcatcgcccgctatgggggccgcaagctggagcgggctcgggatctcttt
gagcaggcgctggatggttgcccccccaaatatgcaaagaccctgtacctgctgtacgca
cagctggaggaggagtggggcctggcccggcacgcgatggccgtgtacgagcgcgccacc
caggccgtggagcccgcccagcagtacgagatgttcaacatctacatcaagcgggcagcg
gagatctatggagtcacccacacccgtagcatctaccagaaggccattgaggtgctgtcg
gacgagcacgcccgggagatgtgcctgcggtttgcggacatggagtgcaagcttggagag
attgaccgtgcccgggccatctacagcttctgctcccagatctgtgaccctcggacaact
ggggccttctggcaaacatggaaggacttcgaggtacggcatggcaacgaggacaccatc
cgggagatgctgcgtatccgccgaagtgtgcaggccacttacaacacacaggtcaacttc
atggcctcacagatgctcaaggtgtcgggcagcgccacaggcactgtgtccgaccttgcc
cccgggcagagtggcatggatgacatgaagctactagagcagcgggcagagcagctggca
gccgaggccgagcacgaccagcctccacgggcccagagcaagatcctgttcgtgaggagc
gatgcgtcccgggaggaactggctgagctagcgcaacaggccaacccggaggagatcgag
ctgggggaggatgaggacgaggacgagatggacctggagcccaatgaggtgcggctggag
cagcagagtgtgccggctgctgtgtttgggagcctgaaggaagactga
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