Eptesicus fuscus (big brown bat): 103296178
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Entry
103296178 CDS
T09083
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03013
Nucleocytoplasmic transport
efus05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103296178 (NUP188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103296178 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103296178 (NUP188)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103296178 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
TRS130_4HB
Motif
Other DBs
NCBI-GeneID:
103296178
NCBI-ProteinID:
XP_054582726
LinkDB
All DBs
Position
15:74463629..74513780
Genome browser
AA seq
1748 aa
AA seq
DB search
MAAAAGGLCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPNSAEK
VKANKDVSSPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDLLKMVLQDERQSQA
LILKVADYYYEERMCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL
YRTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKLFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLLKCALDDRRELHQFAQDG
LICQDMDRLMLTLGDISHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLSSGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFMAHQVSNMSQMISAEGMSA
GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCIMFVLKEMLPSYHK
WRYNSHGVREQIGCLILELIHAILNLCHETDHSSHTPSLQSLCICSLAYTEAGQTVVNIM
GIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQAL
TQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDAF
LARLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGMWSCLHA
VLELIDSQHQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGTL
SPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLRKFSSEKRFAYWSGYVKS
LAVHTADTEGSSCTSLVEYQMLVSAWRMLLIIATSHAEILHLTDSAVRRQLFLDVLDGTK
ALLLVPASVNCLRLGSMMCTLLLILLRQWKRELGPGDEILAPLTEILEGVLQADRQLMEK
TKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGSAMED
KDSMETDDCSRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTTLE
VSLRMKQNLHFTEAALHLLLTLARTQQGAAAVAGAGITQSICLPLLSVYQLSTNGTVQTP
STSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRTVQ
SLACLEEADHTVGFILQLSSFMKEWHFHLPQLLRDVQVNLCYLCQACTSLLHSRKMLQHY
LQNKNGDGVPSAVAPRVQRPPTAAPAAPSSSKQPTADTEASEQRALHVVQYGLLKILSRT
LAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALNML
GELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHSRDKQ
RMKQELSSELSTLLSSLSRYFRRGAPSSPAAGILLSPQGKSTALSKASPESQEPLIQLVQ
AFVRHVQR
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgccggcggtctgtgtgtgaggagcagtagagaactgtggacaattctg
cttggaagatcagctctgagagaactgaaccagattgaggcagaactgaataaacattgg
cagcggctattagaaggactttcctactataaacctcccagtccaaattcagctgaaaaa
gtgaaagctaataaagatgtatcttcaccactgaaggaacttggtttacgaatcagcaag
tttttgggtcttgatgaagaacagagtgtgcagttactccagtgttaccttcaagaggat
tacagaggtactcgggacttactaaagatggttctgcaagatgagaggcagagccaggcc
ttaatcctgaaggttgcagattattactatgaagaaagaatgtgtattcttcgttgtgtc
ttacaccttctcacttatttccaagatgaaagacatccctatagggttgaatatgcagac
tgtgttgataaattggagaaggagctagttacaaaatatagacagcagtttgaagagctt
tatagaactgaagcaccaacatgggagacacatggaaacctcatgactgagcgtcaggtg
tctcgctggtttgtccagtgccttcgggaacagtccatgctgctagaaattatcttcctt
tattatgcatactttgagatggcacctagtgacctattggtattaaccaagctgtttaaa
gagcaaggatttggtagtaggcagaccaacaggcacctggtggatgagaccatggatcct
tttgtggatcggattggctacttcagtgcccttatcctggtggaaggcatggatattgag
tcgttgctcaagtgtgctttggatgacagaagagaactgcaccagtttgcccaggatggg
cttatttgccaggatatggaccgtttgatgttgacccttggggacatttcacatcatgcc
ccagtgcttttggcctgggctctcctccgccacaccctgaatccagaagagacaagcagt
gttgtccggaagataggtggcacagccatacaactgaatgtatttcagtacttgacccga
ctacttcgctctctgtccagtgggggaaatgattgcaccaccagcaccgcatgcatgtgt
gtctatggactcctttctttcgtgctgacctcgctggagctacacacactgggcaatcag
caggatataattgacacagcatgtgaagtcttggcagacccttctcttccagaactattc
tggggaacagagccaacctctggtcttgggatcattctggacagtgtctgtggaatgttt
ccccatctcctctccccactcctacagttgctgcgggccctcgtatcagggaagtctact
gccaaaaaggtatatagtttcttggataaaatgtctttctacaatgagctttataagcat
aagccccatgatgtaatctcccatgaagatggaactctctggcggaggcaaacacccaaa
ctcctttacccacttgggggtcagaccaaccttcgcatacctcaaggcaccgtgggccaa
gtaatgctggacgatagggcttacctggtacgctgggaatactcctatagcagctggacc
ctctttacctgtgagattgaaatgctgcttcatgttgtttccactgcagatgtgattcag
cactgccagcgggtcaaacccatcattgatctggtccataaggtcatcagtacagatctg
tcgatagcagactgtctcctgcccatcacctcccgcatctacatgctactgcagcggtta
acgacagtgatctccccccctgtggatgtcattgcttcttgtgtcaattgtttgactgtt
ttggctgcccggaaccccgcaaaggtctggactgatcttcgtcacacaggctttttacca
ttcatggcccatcaggtctccaacatgagtcagatgattagtgcggaggggatgagtgct
ggagggtacggaaacctcttgatgaatagtgaacagccccagggcgagtatggggtcact
attgcctttctccggttgatcaccactcttgtcaaggggcagcttggtagtacccagagc
caaggactggtgccctgcatcatgtttgtgctgaaggagatgcttcccagctaccacaag
tggcgctacaactcccacggtgtgagagagcagattggttgcttgatcctggagctgatt
catgcgatactgaacctgtgccatgagacagaccacagcagccacacccccagcctgcag
tccctctgcatctgtagcctggcctatacagaagcaggacagacagttgtcaatatcatg
ggcatcggcgtggacaccatcgacatggtgatggctgctcagccccgcagtgatggggca
gagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtcacc
aacaatgttattcggctgaaacctccttctaatgtggtgtcccctctggaacaggctctc
acacaacatggtgcccatgggaacaatctcattgctgttcttgccaaatacatctaccac
aaacatgacccagctttgccacgtctggccatccagctgctgaaacgtctggccacggtg
gccccgatgtcagtgtatgcctgcttgggcaatgatgcggctgccattcgcgacgctttc
ctggcacgattgcagagcaagattgaggacatgcgcatcaaagtcatgatcctggaattc
ctcacagttgcagtagagactcagccaggcctcattgaactgtttctgaatctggaggtg
aaggatggcagtgatggctccaaggagttcagccttgggatgtggagctgtctccatgcg
gtcctggagctgattgactcccagcaccaggatcgctactggtgcccgcccctgctgcac
cgtgcagccatcgcctttctgcatgccctgtggcaggaccggcgggacagtgccatgctg
gttctcaggaccaaacccaagttttgggagaatttaacaagtccactgtttggaaccctt
tctcctccctcagaaacatctgagcccagcatcctggaaacctgtgccctaatcatgaag
ataatatgcttggagatatactatgtagttaagggctcactagaccagtcactaaaagac
acactcaggaagttttccagtgagaaacgcttcgcctactggtcagggtatgtcaagtcc
ttggcggttcacacagccgacacggagggcagcagctgcacctccttggtcgagtatcag
atgctggtctccgcctggaggatgcttctcatcattgccaccagtcacgcagagatactg
cacctgaccgactctgcagtgcgtcgccagctctttcttgatgtgcttgatgggaccaaa
gcgttactcctggtcccagcctcagtgaactgcctccgcctcggctccatgatgtgcact
ctgctgcttatcctcctgcggcagtggaagagagagttaggtcctggggatgagattctt
gcacccttgacagagatcctggagggagtgctgcaggcagaccggcagctcatggagaag
accaaggccaaggtgttctcagcattcatcactgtgctgcagatgaaggagatgagagtg
agtgacatcccccagtactctcagctagtgcttaacgtctgtgaaaccctccaagaagag
gtgattgcgctctttgaccagacccgccacagtctggcatccggcagcgccatggaggac
aaggacagcatggagactgatgactgctctcggccccggcacaaggaccagcgtgatggg
gtgtgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggatgaggatggtgac
tcatggctgcaggtgacccgcaggctccccatcctaccaactctctttaccaccctggag
gtgagccttcgcatgaagcagaacctgcatttcaccgaggcagcgttgcacctgctcctc
accctggctcgcacccagcagggagccgcagcagtggctggagctggcatcacccagagc
atctgtttgcccctcctgagtgtgtaccagctcagcaccaatgggacagtgcagacaccc
agcacctctcggaaatccctcgatgccccctcttggccaggggtctatcgcctgtccatg
tctttgatggaacggctcctcaaaaccctgcgctacaacttcttgaccgaggctctggac
ttcgtgggtgttcaccaggagcggaccttacaatgcctcaacgcggtgaggacggtgcag
agtctggcgtgcttggaggaggcagaccacacggtgggcttcatcctgcagctctccagc
ttcatgaaggagtggcatttccacctgcctcagctcctgcgagatgtgcaggtcaacctg
tgctacctgtgccaggcctgcacctccctcctgcacagccggaagatgctgcagcactac
ctgcagaacaaaaatggggatggtgtcccctcagctgttgctccccgagttcagcggcca
cccacagctgcccctgctgccccctcctcctccaagcagcccactgctgacacagaggct
tcggagcagcgagccttacacgtggtccagtatggcctcctcaagatcctcagcaggacc
ttggcggccctgcgccacttcaccccggacgtctgccagatcctgttggatcagtccctg
gaccttgctgaatacaacttcctgtttgccctgagcttcaccactcccacctttgactct
gaagtggccccctcttttggaacccttctggccacagtgaatgtggccctaaacatgctc
ggagagctggataagaaaaaggagcccctcactcaggctgtggggctcagcacacaggca
gaagggaccagaacactgaagtccctcctgatgtttaccatggagaactgcttctacctg
ctcatctcccaggcgatgcgttaccttagggacccagctgtgcactcccgggacaaacag
cggatgaaacaggagctcagctcagagttgagcaccctgctctccagcctctcgcgctac
ttccgcaggggagcccccagctcccctgctgctggcatcctcctctcgccccagggcaag
tccaccgctctctccaaggccagcccggagagtcaggagcctctgatccagctcgtgcag
gcctttgtccggcacgtgcaaagatag
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integrated database retrieval system