Eptesicus fuscus (big brown bat): 103296213
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Entry
103296213 CDS
T09083
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
efus
Eptesicus fuscus (big brown bat)
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103296213 (TNRC6A)
03036 Chromosome and associated proteins [BR:
efus03036
]
103296213 (TNRC6A)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103296213 (TNRC6A)
Chromosome and associated proteins [BR:
efus03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103296213 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103296213
NCBI-ProteinID:
XP_054570415
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Position
4:4606035..4705195
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AA seq
1900 aa
AA seq
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MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANSQQQPQPPQQQPQQPQPQQPQPPQALPRY
PREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSESSALTNQQPQNNGEVQNS
KNQSDTNHSASGSHYENSQRGPVSSSSNSSTDSKDAVVNNSPEKEAWPLVPGSDPELASE
CMDADSASSSESERNITIMASGSTGGEKDVLRNSTGLGSQNKFVVGGSSNSLGRGSSTGP
WGFSHGAVISTCQVSVDAPESKSESSNNRVNAWGTVSSSSNGGVNPSTLTSASNHGAWPV
LENNGLALKGPVGSSSPGINIQCSTIGQMPNNQSINSKVGGSSTHGTWGSLQETCESEVS
GTQKISFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSNSGAWRVSTMNHPQI
QVPSVMNGTSLPHLSNGESKSAGSYGTTWGAYGSNYSGDKCASPDSQADGDTVNTTLMQP
GMNGPVGTNFPGNTNKGGGLWESGATNSQGASWGSGNGANLGGSRRGWGTPAQNTGTNVP
SVEWSKLPGNQHSSDSANGNGKKFTNGWNSTEEEDQGSATSQTNEQNSMWAKTGGTVDSE
GSTESTGRLEEKVTGETQSRDRRRIDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTA
WDTETSPRGERKADNGTEAWGSSATQTFNSGACVDKTSPNSNDTSSVSGWGDPKPTLRWG
DSKGSNCQGGWEDDSAATGMVKSNQWGHCKEEKPMWNDSQKNKQGWGDGQKSNQGWSVSA
SDNWGDTSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDES
SKPNSSQGWGDPPKSSQSLGWGDSAKPVSSPDWNKQPDMVGSWGVPPAPGKPSGTGWLGG
PIPAPAKEEEPTGWEEPSPESIRRKMDIDDGTSAWGDPSKYNYKNVNMWNKNVPNGSSRS
DQQAQVHQLLPSASAISTPEAGGGSGWGEPWGEPSTPATTVDNGTSAWGKPIDSGPSWGE
PIAVASNTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVEIGMWN
SNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEEAWINPFVKQFSNISF
SRDSPEENVQSNKMDLPGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQMPKESSMER
SPYFDKNGNPSMFGVGNTAAQPRGLQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKY
APNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRFLAQQQRTQSQRSVPSGNRQQQDQ
QGRPLSVQQQMMQQSRQLDPNLLVKQQTPPSQQQSLHQPAMKSFLENVLPHTTPELQKGP
SPVNAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISS
GFRLEESPFVPYDFMNSSTSPASPPGSVGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYP
NIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYN
VPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKP
PLSTWDNSPLRVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCM
QHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQ
SQSLTPSPGWQSLGSSQNRLGSLDCSHPFSSRTDLSHWNGAGLAGTNCGDLHGTSLWGTP
HYSTSLWGPPSSSDPRGMSSPSPINAFLSVDHLGGGGESM
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagcgaccaaagacgtagagaggaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaaacgagccacagccaacagtcagcagcagccgcagccgccacaa
cagcagccacagcagccacagccacagcagccgcagccaccacaggccttgcctcggtat
cctcgtgaagtaccaccacgattccgccaccaggaacataagcagcttctaaagaggggt
cagcattttcctgtcatagcagcaaacctgggatctgctgttaaagtgttaagcagccag
tcagaaagcagtgctttaacaaaccaacagccacaaaataacggagaggtgcagaacagc
aaaaaccagtcagatactaaccacagcgcttccggatctcattatgaaaattcacagcgg
ggacctgtgtcttcttcgagcaactccagcacagactctaaggatgctgttgtaaacaac
tcccctgagaaagaagcatggcccttggtccctggcagtgatccagagttggcttcagaa
tgtatggatgctgattctgcctccagttctgaatcagaaagaaacatcactatcatggct
tcagggagcacaggtggtgagaaagatgtccttcgaaacagcactggacttggttcccaa
aacaagtttgtggttggcggcagcagcaatagtttgggtcgtggaagtagtactgggccc
tggggcttctcccatggagccgtaataagcacatgtcaggtctctgtggatgctcctgaa
agcaagtcagaaagtagcaacaatagagtgaatgcttggggcactgtaagctcttcatca
aatggaggggtaaatccaagcactttgacttcagctagcaaccatggtgcctggccagta
ttagagaacaacggacttgccctaaaagggcctgtagggagtagtagtcctggcatcaat
attcagtgcagtaccataggccagatgcctaacaatcagagtattaactctaaagtgggt
ggttcttctacccatggtacctggggaagccttcaggaaacttgtgaatccgaagtaagt
ggtacacagaagatttcattcagtggtcaacctcagaatatcaccactgaaatgactgga
ccaaataacactactaactttatgacctctagtttaccaaactccggttcagtacagaat
aatgagctgcccagtaactcgggggcctggcgtgtgagcacaatgaatcatcctcagata
caggttccatcggttatgaatggcacttcccttcctcaccttagcaacggagagtcaaaa
agtgcaggctcttatggtactacctggggtgcctatggttctaactactctggagacaaa
tgtgcaagccccgacagccaagctgatggtgacactgtgaacacaactctgatgcagcct
ggcatgaatgggcctgtgggcacgaactttccaggcaacacaaataaaggaggaggcctg
tgggagtctggggccacaaattcccagggtgcatcctggggaagtggaaatggtgcaaac
ttgggaggaagtcgaagaggatggggaactcctgcacaaaacactggcactaatgtaccc
agcgtggagtggagcaaactgcctggcaatcagcattccagtgacagtgcaaacggcaat
ggtaagaagtttacaaatggatggaattctactgaggaagaggatcagggttctgccaca
tctcagacaaatgagcaaaacagcatgtgggccaaaacaggaggtacagtggacagtgaa
ggtagtacagagagcactggacgcctcgaagaaaaagtaactggggagactcagagtaga
gacagaagaagaattgatcagcacacattactccaaagcattgttaacagaactgactta
gatccacgtgtcctatccaactctggttggggacagactcctattaagcagaatactgcc
tgggatactgagacatcgcctagaggggaaagaaaggctgacaatgggacagaggcttgg
gggagctctgcaacacagacttttaactcaggggcgtgtgtagacaagactagccctaac
agtaatgatacctcatctgtatcggggtggggagatcccaagcctactctgaggtgggga
gattccaaaggctcaaactgccaggggggatgggaagatgattctgctgctacaggaatg
gtcaagagcaatcagtgggggcattgcaaagaagagaagcccatgtggaatgattcacaa
aagaacaaacagggctggggtgatggacaaaagtcaaaccaagggtggtctgtttctgcc
agtgataactggggagacacatcaaggagtaaccattggggtgaggctaataagaaatct
agctcaggaggtagtgacagtgacaggtctgtttctggttggaatgaacttggtaaaact
agttcttttacttggggaaataatataaatccaaataattcatcaggatgggatgaatct
tctaaacctaactcttcccaggggtggggagatcctccaaagtctagtcagtcgctgggt
tggggagattcagcaaagccagtcagctctccagactggaacaagcaaccagacatggtt
gggtcttggggagtccctccggctccaggcaaaccctctggtacaggctggctgggagga
cctattccagcgccagcaaaagaagaagaacccacaggctgggaggaaccatccccggag
tccatacggcgcaaaatggacattgatgacggaacctcagcttggggagatcccagcaaa
tacaactataagaatgtgaacatgtggaacaaaaatgtcccaaacggcagcagccgctca
gaccagcaagcacaggtgcaccagctgctgccgtctgcaagtgccatctcaaccccagag
gcgggcggtggctccggctggggtgagccctggggggagccttctactccagccacaact
gtggataatggtacttcagcgtggggtaaacccatagacagtggtcccagctggggggaa
cccattgctgtggcatccaacacttccacgtggggctccagctctgttggtccacaagcg
ttaagcaaatctggaccaaaatctatgcaagatggctggtgtggtgatgatatgccattg
cctggaaatcgccccactggctgggaagaggaagaggacgtggagattggaatgtggaat
agtaattcatctcaagagcttaactcgtctttaaattggccaccatatacaaagaaaatg
tcatcgaagggtctgagtggcaaaaaaaggagaagggaaaggggaatgatgaagggtgga
aacaaacaagaagaagcatggataaatccatttgttaaacagttttcaaatatcagtttt
tcgagagactcaccagaagaaaatgtgcaaagcaataagatggaccttcctggaggaatg
ttacaagacaaacgaatggagatagataaacatagcctaaatattggtgattacaatcga
acggtcgggaaaggccctggttctcggcctcagatgcccaaagagtcttccatggagcgc
agcccttactttgataagaatggcaatcccagtatgttcggtgttggaaacacagcagca
caaccgcggggcctgcagcagcctccagcacaacctctcagttcatctcagcctaatctc
cgtgctcaagtgcctcctccattactctcccctcaggttccagtttcattgctgaagtat
gcaccaaacaacggtggcctgaatccgctctttggccctcaacaggtagccatgctgaac
cagctctcccaactcaaccagctttctcagatctcccagttacagcggtttttagcacag
cagcaaaggacgcagagtcagagaagcgtgccttctgggaaccggcagcagcaagaccag
cagggtcgacctcttagtgtgcagcagcagatgatgcaacagtctcgccaacttgatcca
aacctgttggtgaagcagcagacgccgccatctcagcagcagtcactccatcagccagcc
atgaaatctttccttgaaaatgtcctgccccacactacacctgagctgcaaaaagggcca
tctccagtaaatgctttcagcaacttccctataggcttgaactcaaacttgaatgtaaat
atggatatgaacagtattaaagagccacagtcaagactaaggaagtggactacagtggac
agcatttctgtgaacacatcgttggatcaaaactccagcaaacatggtgctatttcaagt
ggtttcaggctggaagagtctccgtttgttccttatgacttcatgaacagcagtacttcg
ccagccagccctccaggctcagtgggagatggctggccacgtgccaaatcgcccaatggc
tctagcagtgttaactggccaccagaatttcgccctggtgaaccatggaaaggttaccca
aacattgacccagaaactgacccttacgtcactcctggcagtgtcatcaacaatctttca
attaacactgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcctcatcc
ttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaactacaac
gttcccctcagcagtacagcacaaagcacttcagccagaaatagtgattccaaattgacg
tggtctccggggtcagtcacaaacacctctctggcccatgagctgtggaaggtccctttg
ccacctaaaaacatcactgctccatcccgcccacctccggggctcactggtcagaagcct
cccttgtctacgtgggataattctcctcttcgtgtaggtggaggatggggaaattctgac
gccaggtacaccccagggtccagctggggtgagagcagctcagggagaataacaaattgg
cttgttctaaaaaaccttacacctcagatcgacggctcgactctgcgcaccctgtgcatg
cagcacggccccctgataacattccacctgaacctcccgcacggaaacgctttggtccgc
tacagctccaaggaagaggtggtgaaggcacagaagtctctgcacatgtgtgtgctgggg
aacactactattctcgctgagtttgccagtgaagaggagatcagtcgtttctttgcacaa
agtcagtctctgaccccttcccctggctggcagtccctcgggtccagccagaaccggctg
ggctccctcgactgttcccacccgttctccagccggactgatctcagtcactggaatggt
gctgggctggcggggactaactgtggagacctccatggcacttccctctgggggaccccc
cactattccacaagcctgtggggccctccaagcagcagtgacccccgaggaatgagcagc
ccatcccccatcaatgcttttctttctgttgaccacctcggtgggggtggagagtccatg
tga
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