Eptesicus fuscus (big brown bat): 103297038
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Entry
103297038 CDS
T09083
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X2
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103297038 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efus03400
]
103297038 (LIG3)
Enzymes [BR:
efus01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103297038 (LIG3)
DNA repair and recombination proteins [BR:
efus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
103297038 (LIG3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
FMP23
mRNA_cap_enzyme
Synaptonemal_3
Motif
Other DBs
NCBI-GeneID:
103297038
NCBI-ProteinID:
XP_008151889
LinkDB
All DBs
Position
20:complement(38612341..38633292)
Genome browser
AA seq
1011 aa
AA seq
DB search
MTLTFKILFPPTLRVLSRKEVRLFREHLWPDVKQFSQWSQTDWLHGRCLLQKRKPILSFQ
KGHLGPRATCLAFLPGSHVGLCSGPCEMAEQRFCVDYAKRSTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQH
IADLSSKAASTPKKKAVVQAKLTATGQVTSPVKGASFVTNTNPRKFSGFSAKPNNSGEAC
SSPTPKTSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNSKTQIIQDFLRKGSAGDGFH
GDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSPDDMARDLEQGDVSETIRVFFEQ
SKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGRRRALSVQASLMTP
VQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKDGDHFSYFSRSLKPVLPHKVAH
FKDYIPQAFPGGHSMILDSEVLLIDNKTDKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NDVSLMDRPLCERRKFLRDNMVEIPNRIMFSEMKQVTKASDLVDMINRVIREGLEGLVLK
DAKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPGS
QKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFTV
VAGDEGSSTAGGNNGEDEGTSGPAGPQKARTSPNQSSPSAKKAGGKLRHPNSKNGHKPTA
KPSPVKVGEKLVTKSAVKVGEKRKASDETPCHAKVLLDIFTGVRLYLPPSTPDFSRLRRY
FVAFDGDLVQEFDMASATHVLGSRDKNAEAQQVSPEWIWACVRKRRLVAPC
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgactttgactttcaagatcctcttcccaccgaccctccgtgtgctcagccgaaaagaa
gtacgcctattccgagaacatctctggccagacgtaaaacagttcagccagtggtcacaa
acagattggcttcatgggcgctgcctcctccagaaaagaaagcccattctgtcatttcaa
aaaggccatctaggaccacgtgccacctgccttgccttcttgccagggtcgcatgtgggg
ctctgcagtgggccctgtgagatggccgagcaacggttctgtgtggactatgccaagcgc
agcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggcgtatgccgaatcggc
aaagtggtgcccaatcccttctcagagtcggggggtgatatgaaagagtggtaccacata
aaatgcatgtttgagaaactggagcgggcccgggccaccacaaaaaaaattgaggacctc
acagagctggaaggctgggaagagctggaagataatgagaaggaacagatcagccagcac
attgcagacctgtcttctaaggcagcaagcacaccaaagaagaaagccgtcgtccaggct
aagctgacagccactggccaggtgacatctccagtgaaaggtgcttcatttgttaccaat
accaatccccggaagttttctggcttttcagccaagcccaacaactctggggaagcctgc
tcaagcccgacccctaagacaagtctgtcctcaagcaaatgtgaccccaaacacaaagat
tgtctgctacgtgagtttcggaagttgtgcgccatggtggctgaaaatcctagctacaat
tcaaagacccagatcatccaggactttcttcggaaaggctcggctggagatggtttccac
ggtgacgtatacctaacagtgaagctgctgctgccgggtgttattaagagcgtttacaac
ttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcagcccagatgat
atggcacgagacctagagcagggtgacgtgtcagagacaatcagagtcttctttgagcag
agcaagtctttccccccagctgccaagagccttctcaccatccaggaggtggacgaattc
ctcctgcggctctccaagctcaccaaggaggatgagcagcaacaggccctgcaggacatc
gcctccaggtgtacagccaatgaccttaagtgcatcatcaggttgatcaaacatgatctg
aagatgaactcaggtgcaaaacacgtgttagatgccctcgaccccaatgcctatgaagcc
ttcaaagcctcgcgcaacctgcaggacgtggtggagcgggtcctccgcaacgagcaggag
gtggagaaagagccaggccggagacgagctctgagcgttcaggcctcgctgatgaccccg
gtgcagcccatgctggccgaggcctgcaagtccattgagtatgcgatgaagaagtgtcct
aacggcatgtactctgagatcaagtatgacggggagcgagtccaggtgcataaggacgga
gaccacttcagctacttcagccgcagtctcaagcccgtcctacctcacaaggtggcccac
tttaaggactacatcccccaggctttccctgggggccacagcatgatcttggactctgag
gtgctcctgatcgacaacaagacagacaaaccattgccctttgggacgctgggtgtacac
aagaaagctgccttccaggatgctaatgtctgcctgtttgtttttgattgtatctacttc
aatgatgtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcgtgataac
atggttgaaattcccaaccggatcatgttctcagaaatgaagcaagttacgaaagcatcc
gacctggtcgacatgataaaccgggtgatccgagagggcctggaagggctggtgctgaag
gacgcaaagggtacctatgagcctggaaagcggcattggctgaaagtgaagaaagactat
ctgaatgagggggccatggctgacacagctgacctggtggtccttggggccttctatggg
caagggagcaaaggtggcatgatgtccatcttcctcatgggctgctacgacccaggcagc
cagaagtggtgcacagtcaccaagtgttcaggaggccatgacgacgcgacgctcgcccgc
ctgcagaaggagctggacatggtgaagatcagcaaggatcccagcaagatacccagctgg
ctgaaaatcaacaagatctactatcccgacttcatcgtcccagacccgaagaaagctgcc
gtgtgggagatcacaggggctgaattctccaaatccgaggctcacactgccgacgggatc
tccatccggttccctcgctgcacccgaatccgggatgataaggactggaaatctgccacc
aacctcccccaactcaaggaactgtaccagctgtccaaggagagggcggacttcactgtg
gtcgctggagacgaagggagctccactgcagggggcaacaacggagaggatgagggcacc
tcggggcctgctgggcctcagaaggccagaacctcccccaatcagtcctcccccagtgcc
aagaaggcaggagggaagctgcgccaccccaacagcaaaaatggccacaagccgactgca
aagccttcccctgtgaaagtgggggagaagctggtcacgaagtctgctgtgaaagtgggg
gagaagcggaaggcctctgatgagaccccgtgccacgcaaaggtgctgctggacatcttc
actggggtgcggctctacctgccgccctccacaccagacttcagccgtctcagacgctac
tttgtggcatttgatggggacctggtacaggaatttgacatggcctcagccacacatgtg
ctgggtagcagagacaagaacgctgaggcccagcaggtctccccagagtggatttgggca
tgtgtccggaaacgaagactggtggctccctgctag
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