Eptesicus fuscus (big brown bat): 103298085
Help
Entry
103298085 CDS
T09083
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
efus
Eptesicus fuscus (big brown bat)
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efus04040
]
103298085 (SCN11A)
Ion channels [BR:
efus04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103298085 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
103298085
NCBI-ProteinID:
XP_008153053
LinkDB
All DBs
Position
18:complement(6604731..6678848)
Genome browser
AA seq
1781 aa
AA seq
DB search
MDDWCYPVIFPDARNFRPFTSDSLAAIEKRIAIQKEKKKLKDQTAAEPQLRPQLDLKASR
KLPKLYGDIPRELIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFVLGPFNSVRS
LAIRISVHSLFSMFIICTVIINCIFMATAHRKDNHLHIDTELAEYIFTGIYVFEALIKIL
ARGFILDEFSFLRDPWNWLDSIVIATAFVPLLPFVKVNSISLSSLRTFRVFRALKAISVV
SGLKVIVGALLRSVKKLVDVLILTLFCLSIFALVGQQLFMGTLNMKCVKKDCLNISNHDD
YCFEKKDSTEFRLCGTWLGESACSHQFACSHTDRNPDYGFTNFDNFGWSFLAMFRLMTQD
SWEKLYRQTLRTSGPFAVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNKNVTAETEAKER
MFQEAQQLLREEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNKKRKSFFFREPGKEQV
LGSDSDEDSPKKPYLLEQTKRLSQNLSVDFCEEHRDPFQRQRALSAVSILTITMQEQEKS
QEPCLPCGKNLASKYLIWDCSPHWIRFKKALRTVMTDPFTELIITICIIINTLFLAMEHH
NMNKSFELMLQMGNLVFTGIFIAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFVDVMMP
QSLPVFRSFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQLF
GSSFSCEKKNPKPCNATAAACLRRWHMGDFYHSFLVVFRILCGEWIENMWECMLEADKYL
CIVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGNLEGESRKTKVQLALDRFHRAFRFV
IRTLEQFCRKRCRRQKSPKQKEVKEGSSAENKDVFPLVTEIKKDPVTWEESSVLTPAPKP
LRVGPDRTWLAPLAEEEDVQSPVDNEQTVTQPEAGEQAYELDQEDKSTSPRVQNVEIELF
SEDYANLSAQTTRKKSDAISVFSECSTIDLQDPFRRIPEMVPQKEPERCFPKGLACCFPC
CAVNKRKSPWILWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDIHLDKQPKIQEL
LNCTDNIFTYIFILEMGLKWVAFGFQKYFTSAWCWLDFTIVIVSVTSLIDLKGLKSFRTL
RALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNLFSGRFGRCLN
TTTNPALLINYTIIANQSQCKSENFTWDNLKVNFDNVGMAYLALLQVATFKGWTDIMYAA
VDAREKEEQPEFETNKYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNHQQKKISGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTNQLFDVFIIIFILLNMVCMMAE
SYGQSKSMSSILERLNLAFVVIFTIECLIKIFALRQYYFTNGWNLFDCLIVVVSIVSTMI
SALEHQDHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFL
VMFIYAIFGMNSFCKVTQDSGIDDIFNFQTFAGSLLCLFQITTSAGWDTLLNPMLKSEDS
CKTNGENCHLRTIAIVYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEMF
YEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKFQFLVMDLPMVSGDRLHCLDIL
FAFTTRVLGDSTGLDGMKTMMEEKFMEANPLKKLYEPIVTTTKRTEEERCAAVIQKAFRK
YVVMVKTNKCALEDRPRSPLQTLCNGDLSSSGVAEGKVHCD
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atggatgactggtgctatccagtaattttcccagatgcgcggaacttccgccccttcact
tctgattctctggctgcaatcgagaagcggattgccatccaaaaggagaaaaagaagctc
aaagaccagacagcggcagaaccccaacttcgacctcagcttgacctaaaggcctccaga
aagttgcctaagctctatggtgacattccccgtgaactgatagcaaagcccctggaagac
ttggacccattctacagaaatcataagacgtttatggtgttgaacaaaaagagaaccatc
taccgcttcagtgccaaacgcgccttgtttgttttgggccctttcaattcagtccgaagc
ttagccattagaatctcagtccattcattgttcagcatgttcatcatctgcaccgtcatc
atcaactgcatattcatggccacagctcatcggaaagacaaccaccttcatatagatacc
gaacttgctgagtatatcttcactgggatttatgtttttgaagctttgataaaaatattg
gcaagaggttttatcctggatgagttttcttttcttcgagatccatggaactggctggac
tccattgtcattgcaacagcgtttgtgccattattaccatttgtcaaggtcaacagcatc
agtctgtcatccctgcgtaccttccgagtgttcagagctttgaaagcaatttcagtagtt
tcaggtctgaaggtcattgtgggggccttgctgcgctctgtgaagaagcttgtcgacgtg
ttgatcctgactctcttttgcctcagcatctttgccctggtaggtcagcagctcttcatg
ggcactctgaacatgaaatgtgtcaagaaggactgcttgaacatcagtaaccatgatgac
tattgctttgaaaagaaagattccactgaattcaggttgtgtggcacctggttgggtgaa
agtgcctgttcccaccagtttgcatgcagccacactgacaggaatcctgactacggcttt
acaaatttcgacaactttggctggtcttttcttgccatgttccggcttatgacccaagat
tcctgggagaagctttatcgacagaccttgcgtacctcggggccctttgcagtcttcttc
tttgtggtggtcatcttcctgggctctttctacctgattaacttaaccctggctgttgtc
accatggcttatgaggaacagaacaagaacgtaactgctgagacggaggccaaggagagg
atgttccaagaagcccagcaactgttaagagaggaaaaggaggctctggttgccatggga
attgacagaagttcgcttaattctcttgaagcatcatctttttccccaaagaagagaaag
ctatttggtaataagaaaaggaagtccttctttttcagagagcctgggaaagaacaggtt
ctaggatcagattctgacgaagattcccccaaaaagccatacctcctagagcaaaccaaa
cgactgtctcagaacctgtcagtggacttctgtgaggagcatagagacccctttcaaagg
cagagagcgctcagtgctgtcagcatcctcaccatcaccatgcaggaacaagaaaaatcc
caggagccttgcctcccatgtgggaaaaatctggcatccaaatacctcatctgggattgt
agcccccactggatacgctttaagaaagccttgagaactgtgatgaccgacccctttact
gagctgatcatcaccatctgcatcataatcaacactctcttcttggccatggagcatcac
aacatgaacaagagttttgagttgatgttgcaaatgggaaatttggttttcacgggcatt
tttatagcagaaatgtgccttaaaatcattgcgctcgatccctaccactactttcgccga
ggctggaacatttttgacagcattgttgctcttctgagttttgtagatgtgatgatgccg
caaagtttgccagttttccgttccttcagagtgctgagagtcttcaagttagccaaatct
tggccgactttaaacaccctgattaagatcataggccactcggttggagcccttgggaac
ctgactgtggtcctggccattgtggtcttcattttctcagtagtgggcatgcagctgttt
ggctctagtttcagctgtgagaaaaaaaatccaaaaccctgtaatgctacggcagccgca
tgtcttcgacgctggcacatgggggacttctaccactccttcctggtggtgttccgcatc
ctctgcggggaatggatcgagaacatgtgggaatgcatgctagaagctgataaatacctg
tgcatcgttgtcttcttgttgatcatggtgataggaaaacttgtggtactcaatctcttc
attgccttgctgctcaattccttcagcaatgaggagagggatggaaacttggagggagag
tccaggaaaaccaaagtccagttagccctggatcgcttccaccgggctttccgttttgtg
atacgtactctggagcaattttgtcgcaaacgatgcaggaggcaaaagtcaccaaagcaa
aaagaggtgaaagaaggctcttctgcagagaacaaagatgtctttcccctggtcacagag
attaaaaaagacccagtgacctgggaagagtccagtgtactaactcctgcaccaaagccc
ttgcgtgttgggcccgatcggacttggttggccccacttgcagaggaagaagatgttcaa
tctcctgtagacaatgaacagactgtcacacaacctgaggctggggagcaggcctatgag
cttgatcaggaagacaagtccaccagtccaagagttcaaaatgtggaaattgagttgttc
tctgaagattatgctaatttatcagcacagactactagaaagaagtctgatgctatcagt
gtgttctcggaatgtagcaccatcgacctgcaagatccctttaggcggatacctgaaatg
gttccccaaaaggaaccagagagatgttttcccaaaggcctggcttgctgcttcccatgc
tgtgctgtgaacaagagaaagtccccctggatcttatggtggaacctgcggaaaacctgc
taccaaatagtgaaacacagctggtttgagagctttattatctttgtgattctgctgagc
agtggggcattgatatttgaagatattcaccttgataaacaacccaaaatccaagaatta
cttaattgtactgacaatattttcacatacatttttatcctggagatgggtctgaaatgg
gtggcctttggatttcagaagtatttcaccagtgcctggtgctggcttgatttcaccatt
gtgattgtgtctgtgaccagtctcattgacttaaagggcttgaaatccttccggactctt
cgcgcactgaggcccctgcgagctctgtcccagtttgaaggaatgaaggtggtagttaat
gctctcataggtgccatacctgccattctgaatgttttgcttgtctgcctcattttctgg
cttatattttgtatcctgggagtaaacttgttttccggaagatttggaagatgcctgaac
acaacaactaacccagctttacttataaattataccattattgcaaaccaaagtcaatgt
aaaagtgaaaatttcacctgggacaacctgaaagtcaactttgacaatgtgggaatggct
tacctcgccctgctgcaagtggcaacatttaagggttggacagatattatgtatgcagct
gtcgatgccagagagaaggaagagcagccagaatttgagacgaacaaatacatgtacctt
tactttgtattttttatcatctttggctcattcttcactctgaatctctttattggtgtt
ataattgataacttcaaccatcagcagaaaaagataagtggccaagacatttttatgaca
gaagaacagaagaaatactataatgcaatgaaaaagttaggatccaaaaaacctcaaaag
cccattccaaggcctctgaacaaatgccagggtctcgtatttgacctggtcacaaaccag
ctctttgatgtcttcatcatcatcttcattctcctcaacatggtttgcatgatggctgag
tcatatggccagtctaaatccatgagttccatccttgagcgtctcaacctggcctttgtg
gtcattttcacaattgagtgtctcatcaaaatctttgctttgaggcaatactacttcacc
aatggctggaatttgtttgattgtttgatcgtggtcgtttctattgttagcacaatgatt
tctgccttagaacaccaggatcacattcctttccctcccacactcttcagaattgtccgc
ttggctcggatcggcaggatcctgcggcttgtccgggcggcacgaggaatcaggaccctc
cttttcgctctgatgatgtcccttccctccctgttcaacatcggtcttctactctttctg
gttatgtttatttatgccatttttggtatgaactctttctgtaaagtgacgcaagactct
gggattgatgacatatttaacttccaaacttttgcaggcagcttgctctgtctcttccaa
ataaccacctcagcaggttgggacaccctcctcaaccccatgttgaaatcggaagattca
tgtaaaaccaacggagagaactgtcacctccgtaccatagccatagtctactttgtcagt
tacatcatcatctcctttctcattgttgtcaacatgtacattgctgtgattttagaaaac
ttcaatacagccactgaagaaagtgaggaccctttgggtgaagatgactttgaaatgttc
tacgaagtctgggaaaagtttgacccagaagccacacagtttatcaaatattctgccctt
tctgactttgctgatgcccttcccgagcctctgcgtgtggcaaagccaaataaatttcaa
ttcctagtcatggacttgcccatggtaagcggagatcgcctccactgcctggacattctc
ttcgctttcaccacgagggtactcggcgactccactggcctggacggcatgaagacgatg
atggaggagaagttcatggaagccaaccctctgaagaagttgtacgaacccatagtcacc
accaccaagaggacggaagaggagcgatgtgctgctgtcatccaaaaggcctttcgaaag
tacgtagtgatggtgaagacgaacaagtgtgccttggaagacaggccgcgttcaccgctc
cagacactctgcaatggagacttgtccagctccggggtggccgagggcaaggtccactgt
gactga
DBGET
integrated database retrieval system
