Eptesicus fuscus (big brown bat): 103298218
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Entry
103298218 CDS
T09083
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
efus
Eptesicus fuscus (big brown bat)
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efus04121
]
103298218 (PDZRN3)
Enzymes [BR:
efus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103298218 (PDZRN3)
Ubiquitin system [BR:
efus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
103298218 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-TRAF
zf-C3HC4_3
Sina_ZnF
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-RING_10
PDZ_Tricorn
zf-rbx1
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
103298218
NCBI-ProteinID:
XP_027987939
LinkDB
All DBs
Position
18:5418935..5525513
Genome browser
AA seq
1030 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCGKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCTHAARGCGRVVQLQALPAHLERCDFAPARCRHAGCAQV
LPRRDLEAHMRDACDARPVGRCQEGCGLPLTRGELRAGGHCCARALRAHNGALQARLAAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPAGG
KGEETKSLTLVLHRDAGSLGFNIIGGRPCADHQDGSSSEGIFVSRIVDSGPAAKDGGLQI
HDRIVEVNGKDLSRATHDQAVEAFRTAKEPIVVQVLRRTPRARAFPAPSEAQLVDAGTQT
DITFEHIMALAKLSPPSPPALGPYLLPEEHPSAHEYYDPSDYLGGAHQDLDREELELEEV
DLYRANSQDKLGLTVCYRTDDEDDLGIYISEIDPNSIAAQDGRIREGDRIIQINGLEVRN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SALQQKKHEEDGGTTDTATILSTQHEKDSGVGRTDESTRNDESSEQENNGDEAPGSAALA
GQRTRTGSQDTLGSGDLPFSGESLLWADCADDAECESFRQLLELKCPGRSVPESTDGELG
LLDAELLELRCPGRGAGRGAPESVDRELELLNAELRSIELECLSVVRAHRARQLREAWTL
HPGGFRGCDTEADGRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLALDMSPDSSLRR
GAEATTGACGPSPESPLRITEEADLRGAPQSPERSPGDGPSPAPPTHAHAPHKLAHIPAH
ARRYRSYMQLVQQKSAVEYAHSQVSLLGVCKDLGPAGPPEPRTEWKVKVRSDGSRYITKR
PVRDRLLRERALRIREERSGVTTDDDAASDMKLGRYWSREERKQHVARAREQRRRRALLL
QSRLDGPREQPADEDRREVSILELSHKKMMKRRNKKILDNWMTIQELLTHGTKSPDGTRV
YNSFLSVTTV
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgcgggaaggtgctggaggacccgctgaccacgccgtgcggccacgtcttctgcgcaggc
tgcgtgctgccctgggtggtgcaggaggggagctgccccgcgcgctgccgcggccgcctg
tcggccaaggagctcaaccacgtgctgccactcaagcgtctcatcctcaagctggatatc
aagtgcacgcacgcggcgcggggctgcggccgggtggtccagctgcaggcgctgcccgcg
cacctggagcgctgcgacttcgcgcccgcgcgctgccgccatgcggggtgcgcccaggtg
ctgccgcgccgagacctggaggcgcacatgcgggacgcgtgcgacgcgaggcccgtgggc
cgctgccaggagggctgcgggttgcccctgacgcgaggggagctgcgcgcgggcggccac
tgctgtgcgcgggccctgcgggcgcacaacggcgcgctgcaggcccggctcgccgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgcgggcaagcgggagaagtcgctggtggcg
cagctggccgcggcgcagctggagctgcagatgaccgccctgcgctaccagaagaagttc
acggagtacagcgcgcgcctggactcgctcagtcgctgcgtggccgcgccagctggcggc
aagggcgaagagaccaaaagcctgaccctggtcctgcaccgcgacgccggctccctcggc
ttcaacatcatcggcggccggccgtgtgcggaccaccaggatggctcgtccagcgaagga
atcttcgtgtccaggatcgtggacagcgggccggcggccaaggacgggggcctgcagatc
cacgaccgcatcgtggaggtcaacggcaaagacctatcccgggcgacgcatgaccaggcc
gtggaggcgttcaggacggccaaggagcccatcgtggtgcaggtgctgcggcggacgccg
cgggccagggccttcccggcgccgtccgaggcgcagctggtggacgcgggcacccagacc
gacatcaccttcgagcacatcatggccctcgccaagctgtccccgcccagcccgcccgcg
ctggggccctacctcctgcccgaggagcacccctcggcccacgagtactacgaccccagc
gactacctgggcggcgcccaccaggacctggacagggaggagctggagctggaggaggtg
gacctgtaccgagccaacagccaggacaagctgggcctcaccgtgtgctaccgcacggac
gacgaggacgaccttggcatctatataagcgagatcgaccccaacagtatcgcggcccag
gacgggcgcatccgggaaggcgaccgcatcatccagattaacgggctagaggtacggaac
cgcgaagaggccgtggcccttctaaccagcgaggaaaacaagaacttctccttgctcatc
gcacggcccgagctccagctggacgagggctggatggacgacgaccggaacgactttctg
gacgacctgcacatggacatgctggaggagcagcaccaccaggccatgcagttcacggcc
agcgcgctgcagcagaagaagcatgaggaagacggggggaccacggacaccgccaccatc
ctgtccacccagcacgagaaggacagcggcgtgggccgcacggacgagagcacacgcaac
gacgagagctcggagcaggagaacaacggcgacgaggcgcccgggtcggccgcgctggcc
gggcagaggacacgcacgggcagccaggacacgctgggcagcggcgacctgcccttcagc
ggagagtccttgctctgggccgactgcgccgacgatgcagagtgtgagagcttccgccag
ctgctggagctcaagtgcccggggcgcagcgtccccgagagcacagatggggagctgggg
ctgctggacgcggagctgctggagctgaggtgcccggggcggggcgcgggcaggggcgcc
cccgagagcgtggacagggagctggagctgctcaacgccgagctgcgcagcatcgagctc
gaatgtctgagcgtcgtgcgcgcgcaccgggctcggcagctgcgcgaggcctggacgctg
caccccggtggcttccgcggctgcgacacggaggcggatggacgccgtcacgagctctcc
gacatcaccgagctccccgagaagtcggacaaggacagttcaagcgcctacaacaccggg
gagagctgccggagcaccccgctcgccctggacatgtcccccgacagctccctgaggaga
ggggccgaggcgaccacaggggcctgcgggccatcgccagagagtccactccgcatcacg
gaggaggcggacctgcgcggggccccgcagagccctgagcgcagcccaggggatggcccc
agccccgcaccccccacgcacgcgcacgcgccccacaagctggcccacatcccggcgcac
gcgcggcgctaccgcagctacatgcagctggtgcagcagaagtcggctgtggagtacgcg
cacagccaagtgagcctgctgggggtgtgcaaggacctgggccccgccggcccgcccgag
ccccgcacggagtggaaggtgaaggtgcgcagcgacggctcccgctacatcaccaagagg
ccagtgcgcgaccgcctgctgcgggagcgcgcgctgcgcatccgcgaggagcgcagtggg
gtcaccacggacgacgacgcggccagcgacatgaagctgggccgctactggagccgcgag
gagcgcaagcagcacgtggcgcgcgccagggagcagaggcggcggcgcgcgctcctgctg
cagagccggctggacggcccccgggagcagcccgccgacgaggacaggagggaggtgagc
atccttgagctgagccacaagaagatgatgaagaggaggaacaagaagattctggataac
tggatgacgatccaggagctcctgacccatggcaccaagtccccagatggcaccagagtg
tacaattccttcctctccgtgacgactgtctaa
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integrated database retrieval system
