Eptesicus fuscus (big brown bat): 103300265
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Entry
103300265 CDS
T09083
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103300265 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efus03041
]
103300265 (PRPF6)
Spliceosome [BR:
efus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103300265 (PRPF6)
Complex C
U5 SnRNP specific factors
103300265 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
TPR_8
TPR_1
ARM_TT21_2nd
FAT
ARM_TT21_C
TPR_21
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
103300265
NCBI-ProteinID:
XP_008155371
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Position
12:complement(212137..249741)
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AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKSQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWVTAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIEAAQELCEEALKHYEDFPKLWMMKGQIEE
QEEQTDKAREAYSQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIANTLMAKALQECPSSGVLWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWALFYKFELQHGTEEQREEVRRR
CENAEPRHGELWCAVSKDIANWQRKIGEILVLVAARIKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaagccgttcctgggcatgcccgcgccgctcggctacgtgccgggg
ctgggccgaggcgccactggcttcaccacccggtcagacatcgggcctgcccgggatgcc
aacgatcctgtggatgaccgccatgcgccaccgggcaagaggaccgtcggggaccagatg
aagaagagccaggctgcggatgacgatgatgaggatctgaatgacaccaactatgacgag
tttaatggctatgccgggagcctcttctcaagcgggccctacgagaaggatgacgaggag
gcggatgccatttatgcagctctggataaaaggatggacgagagaaggaaagaaagaagg
gagcaaagggagaaagaagaaattgaaaagtaccgaatggaacgtcccaaaatccaacag
cagttctcagacctcaaaaggaagttggcagaagtcacagaggaagagtggctgagcatc
cctgaggttggcgacgccaggaacaaacgccagcggaacccacgctacgagaaactgacc
cctgttcccgacagcttcttcgccaaacatttgcagactggagagaaccacacctccgta
gacccccggcagactcaatttggaggtcttaacacaccctatcccggtgggctgaacact
ccatacccaggtggaatgacgcctggattgatgacacctggcacaggggagctggacatg
aggaagattggccaagcaaggaacacgctgatggacatgaggctgagccaggtgtctgac
tctgtgagtgggcagacggtagtcgaccccaaaggctacctgacagatttaaattccatg
atcccgacccatggaggggacatcaatgacatcaaaaaggcacgactgctcctcaagtct
gtccgggagacaaaccctcaccacccgccagcctggatcgcatccgcccgcctggaagaa
gtcaccgggaagctgcaagtcgctcgaaaccttatcatgaaggggacggagatgtgcccc
aagagtgaagatgtctggctggaagcagccaggttgcagcccggggacaccgccaaggcc
gtggtggcccaagctgtccgccacctcccacagtctgttaggatttacattcgagcagcc
gagctggagacagacattcgtgccaagaagcgggttcttcggaaagccctggagcacgta
cccaattctgttcgcttatggaaggcggcggtcgagctggaagagcctgaagatgctaga
atcatgctcagccgagccgtggagtgctgccccactagcgtggagctgtggctcgctctg
gcaaggttggagacctacgaaaatgcccgcaaggtcttgaacaaggcccgtgagaatatc
cccacagaccggcacatctgggtcacggctgccaagctggaggaagccaacgggaacacg
cagatggtggaaaagatcatcgaccgggccatcacctctctgcgggccaacggcgtggag
atcaaccgcgagcagtggatccaggatgccgaggagtgtgacaaggcgggcagtgtggcc
acctgtcaggcggtcatgcgagctgtgattggcattgggatcgaggaggaggaccggaag
cacacctggatggaagacgccgacagttgtgtggcccacaatgccctggagtgcgcacga
gccatctatgcctacgctctgcaggtgttccccagcaagaagagtgtgtggctgcgagcc
gcctactttgagaagaaccatggcaccagggagtccctggaagcccttctgcagagggcc
gtggcccactgccccaaagcggaggtgctgtggctcatgggcgccaagtccaagtggctg
gcgggcgatgtgcctgcggcgaggagcatcctggctctggccttccaggccaaccccaac
agtgaggagatctggctggcggccgtcaagctggaatcggagaacaacgagtatgagcgg
gcccggcggctgctggcgaaggctcggagcagcgcacccactgcccgggtgttcatgaag
tctgtgaagctggagtgggtgctggggaacatcgaggccgcccaggagctgtgtgaggag
gccctgaagcactacgaggatttccccaagctgtggatgatgaaggggcagatcgaggag
caggaggagcagacggacaaggctcgggaggcctacagccaggggctgaagaaatgtccc
cactccacacccctgtggcttttgctttcccggctggaggagaagatcgggcagctgacc
cgagctcgggccattttggagaagtctcgcctgaagaacccgaagaaccctggactgtgg
ctggagtccgtgcggctggagtaccgtgccgggctgaagaacatcgccaacacgctcatg
gccaaggcgctgcaggagtgccccagctccggtgtcctgtggtctgaagccatcttcctc
gaggccaggccccagaggaagacgaagagtgtcgatgccctgaagaaatgcgagcacgac
ccccacgtgctcctggccgtggccaagctgttttggagtgagcggaagatcaccaaggcc
agggagtggttccaccgcaccgtgaagatcgactccgacctgggggacgcctgggccctc
ttctacaagttcgagctgcagcacggcacggaggagcagcgggaggaggtgaggcggcgc
tgcgagaacgccgagccccggcacggggagctgtggtgcgccgtgtccaaggacatcgcc
aactggcagaggaagatcggggagatcctcgtgctggtggcggcccgcatcaagaacacc
ttttga
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