Eptesicus fuscus (big brown bat): 103303729
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Entry
103303729 CDS
T09083
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03008
Ribosome biogenesis in eukaryotes
efus03013
Nucleocytoplasmic transport
efus03015
mRNA surveillance pathway
efus05014
Amyotrophic lateral sclerosis
efus05164
Influenza A
efus05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103303729 (NXF1)
03015 mRNA surveillance pathway
103303729 (NXF1)
03008 Ribosome biogenesis in eukaryotes
103303729 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103303729 (NXF1)
05168 Herpes simplex virus 1 infection
103303729 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103303729 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103303729 (NXF1)
03009 Ribosome biogenesis [BR:
efus03009
]
103303729 (NXF1)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103303729 (NXF1)
mRNA cycle factors
Stress granule specific factors
103303729 (NXF1)
Ribosome biogenesis [BR:
efus03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103303729 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
UBA_8
LRR_8
Motif
Other DBs
NCBI-GeneID:
103303729
NCBI-ProteinID:
XP_008158951
LinkDB
All DBs
Position
13:81236174..81246937
Genome browser
AA seq
618 aa
AA seq
DB search
MADGGKSYSEHDDRVSFPQRRKKGRGPFRWKCTEGNRRSGRGGTALRTARLEDDDRDVAM
SDAQDVPRVRYNPYTARPNRRVDNWHDRDRIHVTVRRDRVLPQRGGAGNSQDGTSKNWFK
ITIPYGRKYEKSWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASAIKAVNCKILD
QDNRRISIIINSSPPPLTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRLDPDLVDQ
NIDVVLNRRGCMAATLRIIEENIPELLSLNLSSNKLYRLDDMSSIVQKAPNLKILNLSGN
ELKSERELDKIKGLKLEELWLEGNTLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIA
FDVEAPTTLPPCKGSYFGTEALKNLVLHFLQQYYAIYDSGNRQRLLDAYHDGACCSLSIP
FTPQNPARSNLGEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDIHSFVV
DISAQTNTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASP
DEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagggaagtcctacagcgagcacgatgatcgagttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaagtgtaccgaggggaaccgcaggtccgga
agaggaggcactgcccttcggacggcccgccttgaggacgatgacagagacgtggcgatg
agtgatgcccaggatgttccccgagtacgatacaacccctacactgcgcgacccaaccgt
cgggtcgataattggcatgatcgagaccgaattcatgttactgtgcggagagacagagtt
cttccacagagaggaggggctggcaacagccaggatgggacctcgaagaactggtttaag
attacaattccttatggcaggaaatatgagaagtcatggctcctaagtatgattcagagc
aaatgcagtgtccctttcacccccattgagtttcactacgaaaacacacgggcccagttt
tttgttgaggatgccagcactgcctctgcaataaaggctgtcaactgtaagattctggat
caggacaaccgaaggatatctatcatcatcaactcctctcctccgccccttactgtacag
aacgaactgaagccagagcaagtcgagcagctaaagctgatcatgagcaaacgatacgat
ggctcccaacaagcgcttgacctcaagggcctccgtctagacccagacttggtggaccag
aacattgatgttgtcctgaatcgtaggggctgcatggcggctaccctgcgaatcattgag
gagaatatccctgagctgttgtccttgaacttgagcagtaacaagctatataggctggat
gacatgtccagcattgtgcagaaagcacccaacctaaagatcctaaacctctctggcaac
gagttgaaatctgagcgggaattggacaagataaaagggctgaagctagaagagctatgg
ctcgaaggaaacacgctgtgtgacaccttccgagaccaatccacctacatcagcgccatt
cgtgaacgatttcccaaattactacgtttggacggccatgagttacccccgccaattgcc
tttgacgttgaagcccccacgacgttgccaccctgcaaggggagctattttggcacggag
gccctgaagaatctggtcctgcacttcttgcagcagtactatgcgatttacgactctggg
aaccggcagcggctcctggacgcctaccatgatggagcctgctgctccctgagcatccct
ttcaccccccagaaccctgcccgaagcaacttgggcgagtacttcaaggatagcaggaat
gtgaagaaactgaaagacccgaccctgcggttccggctgctgaagcacacgcggctcaac
gttgttgccttcctcaacgagttgcccaagactcagcacgacatccattccttcgtggtc
gacataagtgcccagacgaacacgttactgtgcttctcggtcaatggagtcttcaaggaa
gtggatggaaagtcccgggattctttgcgagccttcacacggacgtttgttgctgttcca
gccagcaattcagggctgtgcattgtaaatgacgagttgtttgtgcggaacgccagccct
gacgagatccagagagctttcgccatgcctgcgcccacgccctcctccagcccggtgccc
accctgtccccagagcagcaggaaatgctgcaggcattctctacgcagtctggcatgaac
ctcgagtggtctcagaagtgcttgcaggacaacaactgggactacaccagatcggcccaa
gcctttactcacctcaaggccaagggtgaaatcccagaagtggcgttcatgaagtga
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