Eptesicus fuscus (big brown bat): 103305411
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Entry
103305411 CDS
T09083
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus01524
Platinum drug resistance
efus03430
Mismatch repair
efus05200
Pathways in cancer
efus05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103305411 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103305411 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
103305411 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
103305411 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efus03400
]
103305411 (MSH6)
DNA repair and recombination proteins [BR:
efus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103305411 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
103305411
NCBI-ProteinID:
XP_008160378
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All DBs
Position
16:25730587..25753138
Genome browser
AA seq
1356 aa
AA seq
DB search
MSRQSTLYSFFPKSPAGLKNANKAPAKASGADAAAAATGASPSPSEDVAWSEVGPGRSAS
PPEARNLNGGLRRSTTPAVSSSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIREKG
KSARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRADEALN
KDKIKRLELAVCDEPSEPEEEEMEVGATYASDKNEEDNEIESEEEVQPKVQGSRRSSRQI
KKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLQSFVKVAPKRKRMVT
GNGSLKRKTSRKETPPVSKRATGISSETRNTLCAFSAPQNSESLAHISGRCDDGSRPAVW
YHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMKKWWQIKSQNFDLVI
FYKVGKFYELYHMDALTGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQ
TETPEMMEARCRKMAHISKHDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLLSLKEK
EEDTSGHTRVYGVCFVDASLGKFFIGQFADDRHCSRFRTLVAHYPPVQVLFERGNLSTET
KMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFKEKLNEDSGVVLPHVLKGMTSE
SDSVGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSATRPGAV
FSKANQRMVLDSVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNP
FAINDRLDAIEDLMFVPDKITEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMY
EETTYSKKKIIDFLSALEGFKVICKIIGTMEEVIDDFKSKILKQVITLQTKNPEGHFPDL
TVELNRWDTAFDHEKARKTGVITPKVGFDSDYDQALADIKENEQSLLEYLEKQRSRIGCR
TIVYWGIGRNRYQLEIPENFITHNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERR
DVSLKDCMRRLFYNFDKNYKNWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVVLLPKED
TPVFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEKEEENGKAACVLVTGPNMGGKSTLM
RQAGLLAVIAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHA
TAHSLVLVDELGRGTATFDGTAIASAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRL
GHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFE
KTTHSLRLFREVCLASERSTIDAEAVHKLLTLIEEL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccggcggggctgaagaat
gccaacaaggccccggccaaggcctcaggtgcagacgccgccgccgctgccaccggggcc
tccccttcccccagcgaggatgtggcctggagcgaggtcgggcccgggcgctccgcgtcg
ccgcccgaggcgaggaacctcaacggagggctgcggaggtcgaccactcctgcggtttcc
tccagttcttgtgacttctcaccaggtgatttggtttgggccaagatggagggttatccc
tggtggccttgcctggtttacaaccacccttttgatggaacattcatccgtgagaaaggg
aagtctgcccgagttcatgtacagttttttgatgacagcccaacaaggggatgggttagc
agaaggctattaaagccatatacaggttcaaaatcaaaggaagcccagaaaggaggtcat
ttttacagtgcaaagcctgaaatacttagagcaatgcaacgtgcagatgaagccttgaat
aaagataagattaagaggcttgaattggcagtgtgtgatgagccctcagaaccagaagag
gaagaaatggaggtaggtgcaacttatgcatcagataagaatgaagaagataatgaaatt
gagagcgaagaggaagtgcagcctaaagtgcaaggatctaggcgaagtagccgccaaatt
aaaaaacggagagtcatatcagactctgagagtgacatcggtggctctgatgtggaattc
aagccagatgctaaggaagaaggaagcagtgatgaaataagcagtggagtgggggatagt
gacagcgaaggcctgcaaagctttgtcaaagttgctccaaagcggaagagaatggtgact
ggaaacggctctctcaaaaggaaaacttcaaggaaggaaacgccccccgtcagtaaacga
gcaactggcatttcctcagaaaccaggaataccttgtgtgctttctctgcccctcaaaat
tctgaatccctagcccatattagtggaagatgtgatgatggtagtcgcccagctgtttgg
tatcatgaaactttagaatggcttaaggaggaaaagagaagagatgtgcacaggaggcga
cccgatcatccagattttgatgcatctacactctacgtgcctgaggatttccttaattcc
tgtactcctgggatgaagaagtggtggcagattaagtctcagaactttgatcttgtcata
ttttataaggttgggaagttttatgagctgtaccacatggatgctcttactggagtcagt
gaactagggctggtattcatgaaaggcaactgggcccattctggtttccctgaaattgca
tttggacgatactcagattctctggttcagaagggctataaagtagcacgggtggaacag
actgagaccccagaaatgatggaggcaagatgccgaaagatggcacacatatctaagcat
gatagagtggtgaggagggagatttgtaggatcattactaagggtacacagacgtacagt
gtgctggaaggtgacccctctgagaactacagtaagtatctacttagccttaaagaaaaa
gaggaagatacttctggccacactcgagtatatggtgtttgctttgttgatgcctctctg
ggaaagtttttcataggacagtttgcagatgatcgccattgctcaaggtttaggactctc
gtggcacattatcctccagtacaagtcttgtttgagagaggaaatctctcaacagaaacc
aagatgattctgaagggttcattatcctcctctcttcaggaaggtctgataccaggctcc
cagttttgggatgcagccaaaactttgagaactcttcttgaagaaggatattttaaagaa
aagttaaatgaggacagtggggtggtgttaccccatgtgcttaaaggtatgacttcagag
tctgattctgttgggttgacaccaggagaaaagagtgaattggccctctctgctctaggt
ggttgtgtcttctacctcaaaaaatgccttattgatcaggagcttttatcaatggctaat
tttgaagaatatattcccttggattctgacatggtcagtgctacaagacctggtgctgtt
ttttctaaagccaatcaacgaatggtgctagattctgtgacattaaacaacttggagatt
tttctgaatggaacaaatggttctactgaaggtaccctactagagaagattgatacttgc
catactccttttggtaagcggcttctaaagcagtggctgtgtgccccactgtgtaaccct
tttgctatcaatgatcgtttagatgctatcgaagacctaatgtttgtgcctgacaaaatc
actgaggttgtagatcttttaaagaagcttccagaccttgagaggctattgagtaaaatt
cataatgttgggtctcccttgaagagccagaaccacccagatagcagggctataatgtat
gaagaaactacatacagcaaaaaaaagattattgatttcctttctgctctggaaggattc
aaagtaatatgtaaaattatagggactatggaagaagtcattgatgacttcaagtctaaa
attcttaagcaggtcattactctacagacgaaaaatcctgaaggtcattttcccgattta
actgtagaactgaaccgatgggatacagcctttgaccatgaaaaggctagaaagactgga
gtgattactcccaaagtaggatttgactctgattatgaccaagctcttgctgacataaaa
gaaaatgagcagagcctcttggaatacttggagaaacagcgcagtcgaattggctgtaga
actatagtatattggggaattggtagaaaccgttaccagttggaaattcctgagaatttc
atcacccataatttgccagaagaatatgagttgaaatccaccaagaagggctgtaaacga
tactggaccaaaactattgagaagaagttggctaatcttataaatgcggaagaacggaga
gacgtatcattgaaggactgcatgcgacgactattctataactttgataaaaattacaag
aattggcaggctgctgtagaatgcatcgcagtgttggatgtcttactgtgcttggctaac
tatagtcgagggggtgatggtcctatgtgtcgtccagtagttctattaccaaaagaagac
actcctgtgttcttagaccttaaagggtcccgccatccctgcattacgaagacttttttt
ggagatgactttattcctaatgacattctaataggctgtgaggagaaagaggaagaaaat
ggcaaagctgcttgtgtgcttgttactggacctaacatgggaggcaagtctacactcatg
agacaggctggcctattagctgtaattgcccagatgggttgttacgtacctgctgaagtg
tgtaggcttacaccaattgatagagtgtttactagacttggtgcctcagacagaataatg
tcaggtgaaagtacattttttgttgaattgagtgaaactgccagtatacttacacatgca
acagcacattctctggtgctggtggatgaactaggaagaggtactgcaacgtttgatggg
acagcaatagcaagtgcagttgttaaagaacttgctgagaatataaagtgtcgtacattg
ttttctacccactatcattcgttagttgaagattattctcaaaacgttgcagtgcgctta
ggacatatggcatgcatggtagaaaatgaatgtgaagatcccagtcaagagactattacc
ttcctttataaattcattaagggagcttgtcctaaaagctatggctttaatgcagcaagg
cttgctaatcttccggaggaggttattcaaaagggacatagaaaagcaagagaatttgag
aagacgactcattcactaagattatttcgggaagtttgcctggctagtgaaaggtcaact
atagatgctgaagctgtccataagttgctgactttgattgaggaattatag
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integrated database retrieval system
