Qipengyuania flava: CHH26_02050
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Entry
CHH26_02050 CDS
T04986
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
efv
Qipengyuania flava
Pathway
efv02020
Two-component system
efv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
efv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CHH26_02050 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CHH26_02050 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efv03021
]
CHH26_02050 (rpoN)
Transcription machinery [BR:
efv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHH26_02050 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ASP29167
LinkDB
All DBs
Position
405348..406793
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AA seq
481 aa
AA seq
DB search
MALGPRLDLRQTQSLVMTPQLQQAIKLLALSNLEIETFVGEALESNPLLEMGEVRREAGE
DAPAEPQEHDSAPDMDGDSALDIADHALDPEAAPGDMGDWSRGDIGSAGAELPDLENRSS
AGPSLADHLTEQVGAVAHDTREALIALRIIGDLDEAGYLPTGLLVIAEELGVPLAEVERA
LATVQSLDPTGVGARSLSECLALQAREADRYDPCMARLIDNLDLVASGDIARLKRMCEVD
DEDFADMLAELRGYDPKPGLAFGAGAEGAVVPDVLITPSDAGWDIRLNEASLPRLVVNRE
YYLELKTGARDKASQSWLNEQLGEADWLIRALDQRQKTILKTAAEIVKRQEGFFREGVTA
MRPLTLREVAEQIEMHESTVSRVTSNKYLSCPRGTFELKYFFSSGVAAADGEGASSEAIK
ARIKALCDGEDPKKVLSDQKLADLLNAEGFDLARRTVAKYREAIGIGSSAQRRRQKKLAV
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgggtccgcgcctcgatctccggcaaacccaatcgctggtgatgacgccgcaa
ttgcagcaggcgatcaagctgctggcgttgtccaatctcgagatcgagactttcgtaggc
gaagcgctcgaatccaacccgttgctcgaaatgggcgaggtgcgccgcgaagcaggcgag
gacgcgcccgccgaaccgcaggaacacgacagcgcgcccgatatggatggcgacagcgcg
ctcgacattgccgatcatgcgctcgaccccgaagccgcgccgggcgacatgggcgactgg
agccgcggcgacatcggcagcgccggcgcggaattgcccgatctggaaaaccgctcttcc
gcggggccctcgctggcggaccatctgaccgagcaggtgggcgcggtggcgcatgacacg
cgcgaagcgttgatcgcgctgcggatcatcggcgatctcgacgaggctggctatctcccg
accgggctactggtgatcgccgaggaactgggcgtgccgctggcagaggtcgagcgcgcg
ctggcgaccgtccagtcgcttgatcccaccggggtcggtgcgcggtcgttgtccgaatgc
ctcgcgctgcaggcgcgcgaagcggatcgctacgatccgtgcatggcgcggctgatcgac
aatctcgacctcgtggcgagcggcgacatcgcccggctcaagcgcatgtgcgaggtcgac
gacgaggatttcgcggatatgctcgccgagctgcgcggctatgatcccaagccggggctg
gctttcggcgcgggagccgagggggccgtcgtgcccgatgttctcatcacgccgagcgat
gcgggctgggacatccgcctgaacgaggccagcctgccgcggctggtggtcaatcgcgaa
tattatctcgagctcaagaccggtgcgcgcgacaaggcttcgcagagctggctcaatgaa
cagttgggagaggcggattggctgatccgcgcgctcgaccagcggcagaagaccattctc
aagaccgccgccgagatcgtgaagcggcaggaagggttcttccgcgaaggcgtcaccgcc
atgcgcccgctgacgctgcgcgaagtcgccgagcagatcgagatgcacgaaagcacggtc
agccgcgtaacgagcaataagtatctttcctgtccgcgcgggacattcgagctgaagtac
ttcttctccagcggggtcgccgcggccgatggcgagggcgcatcttccgaggcgatcaag
gcgcgcatcaaagcgctgtgcgatggcgaagatccgaaaaaagtgctatcggaccagaaa
cttgccgacctgctcaatgcggaaggtttcgatctggcgcggcgcacggtggcgaaatat
cgcgaggcgatcgggatcggttcgagcgcgcagcggcggcggcagaagaagctcgcggtg
atctag
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