Qipengyuania flava: CHH26_02280
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Entry
CHH26_02280 CDS
T04986
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
efv
Qipengyuania flava
Pathway
efv03030
DNA replication
efv03410
Base excision repair
efv03420
Nucleotide excision repair
efv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHH26_02280
03410 Base excision repair
CHH26_02280
03420 Nucleotide excision repair
CHH26_02280
03440 Homologous recombination
CHH26_02280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efv03032
]
CHH26_02280
03400 DNA repair and recombination proteins [BR:
efv03400
]
CHH26_02280
Enzymes [BR:
efv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHH26_02280
DNA replication proteins [BR:
efv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CHH26_02280
DNA repair and recombination proteins [BR:
efv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CHH26_02280
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHH26_02280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_pol_lambd_f
NYN_YacP
DprA_N
Motif
Other DBs
NCBI-ProteinID:
ASP29206
LinkDB
All DBs
Position
complement(452111..454945)
Genome browser
AA seq
944 aa
AA seq
DB search
MGETPHLYLVDGSAYIFRAYHRLPPLTDPEGTPVGAVYGYTTMLWKLADDLHKADGPTHL
AVILDKSSHSFRNEIYDQYKANRPPPPEDLVPQFPLIRDATRAFSLPCIEEPEVEADDMI
ASYARAAQKQGWHVTIVSSDKDLMQLVGEENGARIDMLDTMKNARIYIEEVEEKFGVTPE
KVGDVLALMGDSVDNIPGIFGVGPKTASKLIAEHGGLTAALDAADGMKKSKLKERLIEHR
ADAELSRVLVTLREDCSLPVTLEDMKLDEVPPEPLAAFLGKHGFTSLLKRLEAGNGSPSR
ATDLNPAKQDTAGAAATSDGNRQPLPDYPVVDRSAYECVQTIERLEHWVARAQDARLVAV
DTETSSLDCMQCDLVGISLALGPNDACYIPLGHGGSDMFAERPAQVDKAAALAALAPMLA
SDAVTKVFHNGKYDLNVLARNGVVVAPVDDTMIISFDLDAGRQLDGIGGGHGMDELAERH
LGHTCLTFKELCGTGKKAIPFGEVPLDKATEYAAEDADVTWRLYKMLKPRLATEGGTRIY
ERVDRPLVPVVAQMERHGIKVDRTRLAKLSEEFATETARLEKEIHAFAGTEFTVGSPKQL
GEVLFDTLGYKGGKKGKSGQYSTDQSVLERLSGEGAEIAGKVLEWRQLAKLKSTYTDALQ
QAINPETGRVHTSYSLVGAQTGRLSSTEPNLQNIPIRTEIGRQIREAFVADDGNVLLAAD
YSQIELRLAAHMADVPTLKEAFAHGEDIHARTAKEMFGEVNRDTRGRAKTINFAILYGIS
RWGLAGRLGVEADEAQAMIDTYFQRFPGIQKYIVRTLEQVRERGYSETLFGRKTWFPRIS
SKNQAERQGSERAAINAPIQGTSADIIKRAMVRMMPALEAAGLGHVRMLLQVHDELVFEL
PEGDVTAASEVIERVMAGAAEPSVELDVPLGVEIGTGTSWGAAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacaccgcatctctacctcgtcgacggctcggcctatatcttccgtgcctac
caccgcctccccccgctgaccgatcccgaagggacgccggtcggcgcggtttacggttac
acgaccatgctgtggaagcttgccgacgatttgcacaaggccgacggcccgacccatctg
gcggtgattctcgacaagtcgagccacagcttccgcaacgagatctacgatcagtacaag
gccaatcgcccacccccgcccgaagacctggtgccgcaattcccgctgattcgcgatgcc
acgcgtgcgttcagcctgccctgcatcgaggaacccgaggtcgaggcggacgacatgatc
gcgtcctatgcgcgcgcggcgcaaaagcagggctggcacgtcaccatcgtgtcttccgac
aaggacctcatgcagctcgtcggcgaggagaacggcgcgcgtatcgacatgctcgacacg
atgaagaacgcccgcatctacatcgaagaggtcgaggagaaattcggcgtcactcccgaa
aaagtcggtgacgtgctcgcgctcatgggcgattcggtcgataacattcccggtatcttc
ggggtcggccccaagaccgcgagcaagctgattgccgaacacggcgggctgaccgcggcg
ctcgacgcggccgacggcatgaagaaaagcaagctcaaggaacgcctgatcgagcaccgc
gcggatgcggagctgagccgcgttctggtgaccctgcgcgaagattgcagcctgcccgtc
acgctcgaggacatgaagctcgacgaggtcccgcccgaaccgctcgccgctttcctcggc
aagcatggcttcaccagcctgctcaagcggcttgaagcgggcaatggcagcccttcgcgc
gccaccgatctcaaccccgcgaagcaggacactgcaggtgcagccgccaccagcgacggc
aaccgccagccgctgcccgattaccccgtggtggatcgcagcgcctatgaatgcgtccag
acgatcgagcggctggagcattgggtcgcgcgggcacaggatgcccggctggtggccgtc
gacacagagaccagttcgctcgattgcatgcaatgcgatctcgttggcatcagcctcgcg
ctcggtcccaacgatgcctgctatatcccgctgggacatggcggcagcgacatgttcgcc
gaacgcccggcgcaggtcgacaaggctgccgcgctggccgcgctcgctcccatgctggcg
agcgatgccgtgaccaaggtgttccacaacggcaaatacgatctcaacgtgctggcccgc
aacggcgtcgtcgtcgcgcccgtcgacgacacgatgatcatcagcttcgatctcgatgcc
ggccgccagctcgacggcatcggcggcgggcatggcatggacgaacttgccgaacgccat
ctcggccacacctgcctgacgttcaaggaactctgcgggacgggcaagaaggcgatcccc
ttcggcgaggtcccgctcgacaaggcgaccgaatatgcggcggaagatgcggatgtaacc
tggcggctttacaagatgctcaagccgcgactggccaccgagggcggaacacgcatctac
gagcgggtcgatcgcccgctggtgcccgtggtcgcgcaaatggaacgccacggcatcaag
gtcgaccggacgcgattggccaagctgtcggaagaattcgccaccgagaccgcgcgactg
gaaaaggaaatccacgcctttgcgggcaccgaattcaccgtcggcagccccaagcagctg
ggcgaagtcctgttcgacaccctcggctacaagggcggcaaaaagggcaagagcggacag
tattcgaccgaccagagcgtgctcgagcgcctctcgggcgagggtgcggaaatcgccggc
aaggtgctcgagtggcgccaactggccaagctcaagagcacctataccgacgcgctgcag
caggcgatcaatcccgaaaccgggcgcgtgcacaccagctacagcctggtcggggcgcag
accgggcggctgtcgtcgaccgaaccaaacctgcagaatatcccgatccgtaccgagatc
ggccgccagatccgcgaggcctttgtcgccgatgacggcaatgttctgcttgccgccgac
tattcgcagatcgaactgcggctggccgcgcacatggccgacgttcccacgctgaaggaa
gccttcgcccacggcgaggacatccacgcccgcaccgcgaaggaaatgttcggcgaggtc
aaccgcgacacccgcgggcgcgccaagacgatcaatttcgccattctctacggcatttcg
cgctgggggctcgcgggccggctcggcgtcgaggccgacgaggcgcaggcgatgatcgac
acctatttccagcgcttcccgggcatccagaaatacatcgttcgcacgctcgaacaggtc
cgcgaacgcggatattcggaaacgctcttcggccgcaagacgtggttcccgcgcatctcc
tcgaagaaccaggccgaacgccagggcagcgagcgcgcggcgatcaatgcgccgatccag
gggaccagcgcggatatcatcaagcgcgccatggtgcggatgatgcccgcactcgaagcc
gccgggctgggccatgtccggatgctgctgcaggtccatgacgaactggtcttcgaattg
cccgagggtgatgtaaccgcggcatccgaagtgatcgaacgggtgatggcgggcgccgcc
gagccttcggtcgaactcgacgtcccgctgggcgtcgagatcggcacgggcaccagctgg
ggagcggcacactga
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