Qipengyuania flava: CHH26_04875
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Entry
CHH26_04875 CDS
T04986
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
efv
Qipengyuania flava
Pathway
efv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHH26_04875 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efv03019
]
CHH26_04875 (pnp)
03016 Transfer RNA biogenesis [BR:
efv03016
]
CHH26_04875 (pnp)
Enzymes [BR:
efv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CHH26_04875 (pnp)
Messenger RNA biogenesis [BR:
efv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CHH26_04875 (pnp)
Transfer RNA biogenesis [BR:
efv03016
]
Prokaryotic type
tRNA degradation factors
CHH26_04875 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
S1_2
OB_RRP5_4th
Vip3A_N
FliG_C
Motif
Other DBs
NCBI-ProteinID:
ASP29638
LinkDB
All DBs
Position
982952..985228
Genome browser
AA seq
758 aa
AA seq
DB search
MFDTKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVREGQDFFPLT
VHYQEKFSAAGRIPGGFFKREGRATEKETLTSRLIDRPVRPLFPEGFYNEINVIAQVLSY
DGETEPDIVAMIAASAALTISGVPFMGPIGAARVGFKNGEYVLNPSLEDALGEDGRLDLV
VAATQDAVMMVESEAKELTEEEMLGAVMFAHEESRKVIGAIVELAEQAAKDPWEIDTSDD
TSAIKEKLRGIVGDDIAAAYKLTDKSARSDALSAARDKAKEAFAEEEPQTQMVANKAVKK
LEAEIVRGAILKDGQRIDGRKLDQVRPIEAMVGLLPRTHGSALFTRGETQAICTTTLGTK
DAEQMIDGLEGLSYNHFMLHYNFPPYSVGEVGRFGFTSRRETGHGKLAWRALHPVLPAHE
DFPYTIRILSDITESNGSSSMATVCGGCLSMMDAGVPIERPVSGIAMGLILEGDEFAVLS
DILGDEDHLGDMDFKVAGSESGITSLQMDIKVAGITQEIMKTALEQAKAGRAHILGEMNK
ALSTARTGVSKHAPRIETMQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISS
SNADEIEAAKKWIEGIVEEAEVGKIYNGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERV
EKPTDVVSEGQEVKVKVLEIDNRGKVRLSMRVVDQETGEELEDTRPPREPRGDRGPRGGG
GGRGGDRRGGRGGPRRDRDGGGNKDGGGEAHVPDFLKD
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacacgaaaaccgtatcgctggagtggggcggaaagaccctcactctggaaacc
ggccgcatcgcccgtcaggccgacggcgcggtcctcgccacctatggcgaaaccgtggtg
ctgtgcgcagtcaccgctgccaagagtgtccgcgaagggcaggacttctttccgctcacc
gtgcactaccaggaaaaattctccgccgcgggtcgtatcccgggtggcttcttcaagcgc
gaaggccgcgccacggagaaggaaacgctgacctcgcgcctgatcgaccgcccggtgcgg
ccgctcttccccgagggattctacaacgaaatcaacgttatcgcgcaggtcctctcgtat
gacggcgagaccgagcccgatatcgttgcgatgatcgccgcttcggccgcgctgaccatt
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggtttcaagaacggcgaa
tacgtcctcaacccgagcctcgaagatgcgctcggcgaagatggtcgcctcgacctcgtc
gtcgctgccacgcaggacgcggtgatgatggtcgaatccgaagccaaggaactgaccgaa
gaggaaatgctcggcgccgtcatgttcgcgcatgaggaaagccgcaaggtcatcggcgcg
atcgtcgaactggccgaacaggccgccaaggatccgtgggaaatcgacacttcggacgac
acttcggcgatcaaggaaaagctgcgtggcatcgtcggcgacgacatcgccgcagcctac
aagctgaccgacaagtcggcccgttcggacgcgcttagcgcggcccgcgacaaggcgaag
gaagctttcgccgaggaggaaccgcagacgcagatggtcgccaacaaggcggtcaagaag
ctggaagcggaaatcgtgcgcggcgccatcctcaaggatggccagcgtatcgacggccgg
aagctcgaccaggttcgcccgatcgaggcgatggtcggcctgctgccgcggacccacggt
tcggcgctgttcacgcgcggtgaaacgcaggcaatctgcaccaccacgctgggcacgaag
gatgccgagcagatgatcgacggtctcgaaggcctgtcgtacaatcacttcatgctgcac
tacaacttcccgccctattcggtcggcgaagtggggcgcttcggctttaccagccgccgc
gaaaccggtcacggcaagctcgcatggcgcgcgctgcacccggtgctgcccgcgcatgaa
gatttcccctataccatccgcatcctgtcggacatcaccgagtctaacggctcgtcctcg
atggcaaccgtctgcggtggctgtctgtcgatgatggacgcaggcgttccgatcgagcgt
ccggtctcgggcatcgccatgggcctgatcctcgaaggcgacgagtttgccgtcctgtcg
gacatcctcggtgacgaagatcaccttggcgacatggacttcaaggtcgccggttcggaa
agcggtatcacctcgctgcagatggacatcaaggttgccggcatcacgcaggaaatcatg
aagaccgcgctcgagcaggccaaggccggccgcgcgcacatcctcggcgagatgaacaag
gcgctgtcgaccgctcgcacgggcgtgtccaagcacgctccgcgcatcgagaccatgcag
atcgacaagtcgaagatccgcgacgtgatcggtacgggcggcaaggtgatccgcgagatc
gtcgccgaaaccggtgccaaggtcgacatcgacgacgaaggcgtgatcaagatttcgtcg
agcaatgccgacgagatcgaagccgcgaagaagtggatcgagggcatcgtcgaagaggcg
gaagtcggcaagatctacaacggcaaggtcgtcaacatcgtcgacttcggtgccttcgtg
aacttcatgggcggcaaggacggtctggtccacgtcagcgaaatgaagaacgagcgtgtc
gagaagccgaccgacgtcgtgtcggaaggccaggaagtgaaggtcaaggtcctcgagatc
gacaatcgcggcaaggtccgcctgtcgatgcgcgtggtcgaccaggagaccggcgaagag
ctggaagacactcgtccgccgcgcgaaccgcgcggtgaccgtggcccgcgtggcggcggt
ggtggccgtggcggcgatcgtcgcggtggccgcggtggcccgcgtcgcgaccgcgacggt
ggcggtaacaaggacgggggcggtgaagcccacgtgcccgactttctgaaggactga
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