Qipengyuania flava: CHH26_06040
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Entry
CHH26_06040 CDS
T04986
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
efv
Qipengyuania flava
Brite
KEGG Orthology (KO) [BR:
efv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efv03032
]
CHH26_06040 (topA)
03400 DNA repair and recombination proteins [BR:
efv03400
]
CHH26_06040 (topA)
Enzymes [BR:
efv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHH26_06040 (topA)
DNA replication proteins [BR:
efv03032
]
Prokaryotic type
DNA Topoisomerases
CHH26_06040 (topA)
DNA repair and recombination proteins [BR:
efv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHH26_06040 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ASP29838
LinkDB
All DBs
Position
1209474..1212065
Genome browser
AA seq
863 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGKDFKVLASYGHVRDLPPKDGSVRPDEGFAMDWELYRDKQK
RFKEISDAAKGADRLVLATDPDREGEAISWHVLELLKKRKTLPDSVDRVTFNAITKQAVT
EAMKAPRELDQPLIDAYLARRALDYLYGFTLSPVLWRRLPGAKSAGRVQSVALRLIVDRE
IEIERFRADEYWSVIAKLQQDGSEFDARLVKYQGKKLEKLTLGDEGSAKAAKAAVEAANF
TIEEIETKPFKRNPAPPFTTSTLQQEAARKLGFSASHTMRLAQSLYEAGAITYMRTDGVQ
MDGSAISECRKAVSDRYGGHALPEKPRIYQSKAKNAQEAHEAIRPTDFARDRVASGDEGK
LYDLVYKRAMASQMAAAQLERTTVTLRDPTGQHELRATGQVVKYPGFLAVYQEGRDDADD
DEDGLLPAMSKGDSPLKRGVDANQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQTL
RDRAYVRMEKNRFFAEESGRLLTAFLERFFPQYVAFDYTAGLEDELDTVSDGREDWKKLL
EAFWRDFKPKTEEVMDKKPSEVTEVLDEFLSDYLFPERADGKDPRHCPLCESEGREGGRL
ALRGGRYGAFVACANYPDCKFTRQFAKPGGEGDDGADDGVMGEDPETGLPVERKSGRFGP
YVQLGEGKEAKRASIPKDLDDFDLEWALKLLGLPRIVGQHPETGKDIEAAIGRYGPYLRH
DGKYAKLQSTRDVFDTGMNAAVSLLAEAANRKGGGRGKAEPIKTLGEHPTSGGEMKVMPG
RYGPYVTDGTTNATIPKDMKPEDVTEAQAIELIDARAAKGPAKKKKAAPKKKATAKKKPA
AKKAPAKKKAPAKKAAAKKAAAD
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggtcatcgtcgaatcgcccgccaaggcgaaaaccatcgagaaatacctcggc
aaggacttcaaggttctcgccagctacggtcacgtccgcgacctgccgcccaaggatggc
agcgtccgcccggacgagggcttcgcgatggactgggaactctatcgcgacaagcagaag
cgcttcaaggaaatcagcgacgcggccaagggcgccgaccggctggtcctcgcgaccgac
cccgatcgcgagggcgaggcgatttcgtggcacgtgctcgaactgctgaagaagcgcaag
acgctgcccgacagcgtcgaccgcgtgactttcaacgcgatcaccaagcaggcggtgacc
gaggcgatgaaggccccgcgtgagctcgaccagccgctgatcgatgcctatctcgcgcgc
cgcgcgctcgactatctctatggcttcacgctttcgccggtgctgtggcggcggcttccc
ggtgcgaagagcgcgggacgcgtgcaatcggtcgccctgcggctgatcgtcgaccgcgag
atcgagatcgagcgcttccgtgccgatgaatactggtcggtcatcgccaagctgcagcag
gacggcagcgaattcgatgcgcggctggtcaagtaccagggcaagaagctcgagaagctg
acgctgggcgatgaaggcagcgccaaggcggccaaggcagcggtcgaagcggccaatttc
acgatcgaggagatcgagaccaagccgttcaagcgcaatcccgcacccccgttcaccacc
tcgacgctgcagcaggaagccgcgcgcaagctgggtttctccgccagccacacgatgcgc
ctggcgcagtcgctctacgaagcgggcgcgatcacctacatgcgtaccgacggcgtgcag
atggatggcagcgcgatctcggaatgccgcaaggcggtgtccgatcgctatggcggccac
gcgctgcccgaaaagccgcgtatctaccagtcgaaggccaagaacgcgcaggaagcgcac
gaagcgatccgcccgaccgattttgcgcgcgaccgcgttgcctcgggtgacgagggcaag
ctctacgatctggtgtacaagcgcgcgatggccagccagatggcggcggcgcagctcgaa
cgcaccactgtcacactgcgcgatcccaccggccagcacgaattgcgcgccaccgggcag
gtggtgaaatatcccggcttcctcgcggtctaccaggaaggccgcgacgatgccgatgac
gacgaggacggtctgctgcccgcgatgagcaagggcgacagcccgctcaagcgcggggtc
gatgccaaccagcactttacccagccgccgccgcgcttttccgaggcgagcctggtcaag
cggctcgaagaactcggcatcggccgcccctcgacctatgccagcacgatccagacgctg
cgcgaccgtgcctatgtgcggatggagaaaaaccgcttcttcgccgaagagagcgggcgg
ctgctgaccgccttcctcgaacgcttcttcccgcaatatgtcgccttcgattacacagcc
gggctcgaagacgagctcgacactgtcagcgacgggcgcgaggactggaagaagctgctc
gaggccttctggcgcgacttcaagcccaagaccgaagaggtgatggacaagaagccttcg
gaagtgaccgaggtgctcgacgaattcctgtccgactacctgttccccgaacgcgccgac
ggcaaggacccgcgccattgcccgctgtgcgagagcgagggccgcgagggcggccggctg
gcgctgcgcggcggccgctacggcgcgttcgtcgcctgcgccaattaccccgactgcaag
ttcacgcgccagttcgccaagcccggcggcgaaggcgacgacggggccgacgatggcgtt
atgggcgaggatcccgaaaccggcctgcccgtcgagcgcaagagcgggcggttcggcccc
tatgtccagctgggcgagggcaaggaagccaagcgcgcaagcatccccaaggacctcgac
gatttcgatctcgaatgggccctgaagctgctcggcctgccgcgcatcgtcggccagcat
cccgagaccggaaaggatatcgaagccgcgatcgggcgttacggcccctacctgcggcac
gatggcaaatacgccaagctgcagagcacgcgcgatgtgttcgataccggcatgaacgca
gcggtctcgctgctggccgaagccgccaatcgcaaaggtggcgggcgcggcaaggccgag
ccgatcaagacgctgggtgaacaccccaccagcggcggcgagatgaaggtgatgccgggc
cgctacggcccctatgtcaccgacggcaccaccaatgcgacgatccccaaggacatgaag
cccgaggacgtcactgaagcgcaggcgatcgaactgatcgatgcgcgcgcggccaagggc
ccggcgaaaaagaagaaggcagcgcccaagaagaaggcgaccgcgaagaagaagcccgcc
gccaaaaaagcgcccgcgaagaagaaggccccggcgaagaaggcggctgccaagaaggcc
gcggccgactga
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