Qipengyuania flava: CHH26_07525
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Entry
CHH26_07525 CDS
T04986
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
efv
Qipengyuania flava
Pathway
efv03030
DNA replication
efv03430
Mismatch repair
efv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHH26_07525
03430 Mismatch repair
CHH26_07525
03440 Homologous recombination
CHH26_07525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efv03032
]
CHH26_07525
03400 DNA repair and recombination proteins [BR:
efv03400
]
CHH26_07525
Enzymes [BR:
efv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHH26_07525
DNA replication proteins [BR:
efv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHH26_07525
DNA repair and recombination proteins [BR:
efv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHH26_07525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
COE1_HLH
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ASP31660
LinkDB
All DBs
Position
1509217..1512693
Genome browser
AA seq
1158 aa
AA seq
DB search
MPYKPFVPFRILSAYTMLEGAIDPKAMAKLAKERGFPAIAIADRNGLYGAVMFANACKAE
GVQPIIGTLLGVSRDSEGKQVDYLPLYAQDEAGYDNLCHLVSKAHLERPLEYDPHVGMDD
LAGYTDGLIAFTGASEGAVTRLLAEGQQSHAEAALDRLQALFPERLYIELARRGNAVEGR
AEAALVDLAYARDLPLVATNPANFAEPHMHKAHDAMLCIAGSTHVDAEERAKSNPESYVK
TYHMMEEAFDDLPEAVENTLVVAQRCAYAPPYRKPILPSLAGDLEGEARALEEDARKGLE
ARLEPYGEMSDEQRKVYFDRLQFEVDIINQMGFPGYFLIVADFIKWAKDHDIPVGPGRGS
GAGSLVAWALTITDLDPIQLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQQKYGH
DHVAQIITFGKLKARAVLRDTGRILQMSYGHVDRLCKMVPNHPTDPWTLPRALNGAADFK
AEYDNDNEVKRLVDLAMQLEGFPRNSSTHAAGVVIGDRPLAKLVPLYRDPRSDMPVTQYD
MKNVESSGLVKFDFLGLKTLSVLKKAVDLLKRREIDIDLSQLPLDDPKVYELMKAGNTVG
VFQLESEGMRRTLTAVKPTNFGDIIALVSLYRPGPMDNIPLFGKRKAGEVEIEYPHAKLE
GILAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKVQAEMDIQRERFVAGCKEV
SGIEKAEANALFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHYPEEFYAASMCFDMHQ
SEKLAIFVDDARRGGITVLPPALNYSEAEYTVEQTDDGYAVRYALAGIRNVGERAMEAIV
EERETAGRFESLKDLFERLPKGSMNSRQLEALISAGALDEFEPNRAKLMANVDMLLAVAD
AAERERSSGQAGLFGGEDAAVEDDLRLKDAEDWSLSEARAREKENMGFSFKQHATAAYRE
IASAQGARSHASLMSGGVPGGGRMGAVMAVQVEGASKGTTKRGKPFIRAEFSDASGQFSA
ACFEEGLVEKFLEWAKNGTCVKLDVELDSPSPDEPPRITVRGAVPLDAVRGSMAMLLTLE
VESVEAMAQLALALGEGGEGGDEAVATLLTGDAAAPVMRLGRTFSIDGELAERLASVPGL
AKVQLTARRGKANLRLVA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgccatacaagcccttcgtcccctttcgtatcctttccgcctatacgatgctcgagggc
gcgatcgatccgaaggcgatggccaagctggccaaggagcgcggttttcccgcgattgcg
atcgccgaccgcaacgggctgtacggcgccgtcatgttcgccaatgcctgcaaggcggaa
ggcgtgcagccgatcatcggtacgctgctgggtgtctcgcgcgacagcgagggcaagcag
gtcgattatctcccgctctatgcgcaggacgaggcgggttacgacaatctttgccacctc
gtttcgaaggcgcatctcgaacgcccgctcgaatatgatccgcatgtcgggatggacgat
ctcgccggatataccgacgggctgatcgcattcaccggggcaagcgagggcgcggtcacg
cggcttctggcggaaggccagcaaagccatgccgaagccgcgctcgaccggttgcaggcg
ctgttccccgaacggctctacatcgaactcgcgcggcgcgggaacgcggtcgagggacgc
gccgaagcagcgctggtcgatctcgcctatgcacgcgaccttccgctggtggccaccaat
cccgccaatttcgccgaaccgcacatgcacaaggcgcatgacgcgatgttgtgcattgcc
ggttcgacgcatgtcgatgcggaggagcgcgccaagtcgaaccccgaaagttacgtcaag
acctaccacatgatggaagaggccttcgacgacctgcccgaagcggtcgagaacacgctc
gtcgtcgcgcagcgctgtgcctatgcgccaccctaccgcaagccgatcctgcccagcctc
gcgggcgacctcgagggcgaggcgcgcgcgctggaagaagatgcgcgcaagggattggaa
gcccggctcgaaccttatggcgagatgagcgacgagcagcgcaaggtctatttcgaccgg
ctgcaattcgaagtcgacatcatcaaccagatgggtttccccggctacttcctgatcgtt
gccgacttcatcaaatgggccaaggaccacgacatccccgtggggccggggcgtggttca
ggcgcgggcagcctcgtcgcctgggcgctgacgatcaccgatctcgatccgatccagctg
ggcctgctgttcgaacgtttcctcaatcccgaacgcgtgtcgatgcccgacttcgatatc
gacttctgcgaaacccgccgcggcgaggtgatccgttacgtccagcagaaatacgggcac
gaccacgtcgcgcagatcatcactttcggcaaactcaaggcgcgcgcggtgctgcgcgat
acggggcgcatcctgcaaatgagctacggccatgtcgaccggctgtgcaagatggtgccc
aaccacccgaccgacccgtggacgctgccgcgtgcgctcaatggcgcggccgatttcaag
gctgaatacgacaacgacaacgaggtgaagcggctcgtcgacctggcgatgcaactcgaa
ggctttccgcgcaacagctcgacccacgcggcgggcgtggtgatcggcgaccgcccgctg
gccaagctggtgccgctctaccgcgacccgcgttcggacatgccggtgacgcagtacgac
atgaagaatgtcgagagctcggggctggtcaagttcgacttcctcgggctgaagacgctg
tcggtgctcaagaaggcggtcgacctgctcaagcggcgcgagatcgacatcgacctgtcg
caactaccgctcgacgatcccaaggtctacgaactcatgaaggcgggcaacacggtgggc
gtgttccagctcgagtcggaaggcatgcggcgcacgctgaccgcggtgaagccgaccaat
ttcggcgacatcatcgcgctcgtctcgctctaccgtccggggccgatggacaacatcccc
ctgttcggcaagcgcaaggcgggcgaagtcgaaatcgagtacccccacgccaagctcgaa
ggcatattggccgagacctacggcatcttcgtctaccaggaacaggtcatgcaggcggcg
cagatcctcgcgggctattcgctcggcgacgccgatttgctgcgccgtgcgatgggcaag
aaggtccaggcggagatggacatccagcgcgagcgtttcgtggcggggtgcaaggaggtc
agcggtatcgagaaggccgaggcgaacgcgctgttcgatttgatcgacaagttcgccgga
tatggtttcaacaagtcgcacgccgccgcctatgcgctgctcgcctaccagaccgcctgg
ctcaaggcgcattatccggaagaattctacgccgcttcgatgtgcttcgacatgcaccag
tccgaaaagctggcaatcttcgtcgacgatgcgcggcgtggcgggatcacggtgctgccg
cctgcgctcaattactcggaagccgaatatacggtcgagcagaccgacgatggctatgcc
gtgcgctatgcccttgcgggcatccgcaatgtcggcgagcgcgcgatggaggcaatcgtc
gaggaacgcgagaccgccggccggttcgaaagcctgaaggacctgttcgaacggctaccc
aagggctcgatgaattcgcgccagctcgaagcgctcatcagcgcgggcgcgctcgacgag
ttcgagcccaatcgcgccaaactgatggccaatgtcgacatgctgctcgcggtggccgat
gcagccgagcgcgaacgttcgagtgggcaggccgggctgttcggcggcgaggatgcggcg
gtcgaggacgatctgcggctgaaggacgcagaggactggtcgctcagcgaggcgcgcgcc
cgtgagaaggagaacatgggcttttccttcaagcagcacgccaccgctgcctatcgcgag
atcgccagcgcgcagggtgcgcgttcgcacgcctcgctgatgtccggtggcgtgcccggt
ggcggccgcatgggggcggtgatggcggtgcaggtcgaaggcgccagcaagggcacgacc
aagcgcgggaagcccttcatccgcgccgagttctccgatgcatcgggccagttcagcgca
gcctgtttcgaagaaggactggtcgagaaattcctcgaatgggccaagaacggcacctgt
gtgaagctcgatgtcgaactcgacagccccagccccgacgaaccgccgcggatcacggtg
cgcggggcggtcccgctcgacgcggtgcgtggcagcatggcgatgctgttgacgctcgag
gtcgagagcgtcgaggccatggcgcagctggcgctggcgctgggcgaaggtggcgagggt
ggcgacgaagcggtcgccaccttgttgaccggcgatgccgccgcgcccgtcatgcgattg
gggcgaacattttctatcgacggggagcttgccgaacgcttggcaagcgtgcccgggctt
gccaaggtgcagctgaccgcgcggcggggcaaggcgaacctgcgcctcgtcgcctga
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