Qipengyuania flava: CHH26_07715
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Entry
CHH26_07715 CDS
T04986
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
efv
Qipengyuania flava
Pathway
efv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHH26_07715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efv03019
]
CHH26_07715
03009 Ribosome biogenesis [BR:
efv03009
]
CHH26_07715
Enzymes [BR:
efv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CHH26_07715
Messenger RNA biogenesis [BR:
efv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CHH26_07715
Ribosome biogenesis [BR:
efv03009
]
Prokaryotic type
rRNA processing factors
CHH26_07715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
LZ_Tnp_IS66
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
ASP30131
UniProt:
A0A222EUQ1
LinkDB
All DBs
Position
complement(1551812..1554541)
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AA seq
909 aa
AA seq
DB search
MATRMLIDARHQEETRVAVLKGNRIEEFDFESADHKQIKGNIYLAKVTRVEPSLQAAFVD
FGGNRHGFLAFSEIHPDYYQIPKEDREALLEAEAEAAEEEARLRDEEEDRGEMPGDEYDA
DDESSEALAEDLAEDGLEEVDTSDKDDVATIEEGQLDRDDDDDDDSDDDAENGDGDEKSR
GRGRGKRGRGRRQGKGRARTKEVDEARAKRMALRRRYKIQDVIQRRQVLLVQVVKEERGN
KGAALTTYLSLAGRYTVLMPNSSHGGGISRKISSASDRKRLKQVVSDLSLPRTMGLIVRT
AGLSRTKPEIKRDFDYLARLWDEIRERTLSSSAPALIHSDSDLIKRAIRDIYNREIEEVV
VEGEDGYKSAKQFMKLLMPSHARRVKQYSDPVPLFQRYGAEDQLKAMYDPVVQLKSGGYL
VINPTEALVSIDINSGRSTKEHNIEQTALHTNLEAAREIARQLRLRDMAGLVVIDFIDQE
HHSNTRKVEKAMKEALKNDRARIQVGRISSFGLMEMSRQRLRTGVLEATTRECPHCDGTG
LVRTASSAGLSALRLIEDEAAKGKGSVIRLAASTEAAVYLLNEKRAELMEIEQRYHVTVE
VVPEGEDEGAKMTVSSHGPKPKDAPRFDPIVDDEIEDEVVDESDDEDSDDGSDDRPRKKR
RRRRGGRGRNKSRDRNDEQDGDDSDDSDDDAEADRGESGEGDEDEDRSKKRRRRGGRRRG
GRGRGRRSDEVNAEDAEQLEQVSEAVVEDMAVVAGPEDSPETAEVAADSEEKPKPKKRAP
RKKKAAADGEAATDTAADGETEEKPKPKKRAPRKKKSEAESVGDSDAPSADAEAEAKPAP
KKRAPRKKKADAETVSDSPAEPQSARETPEETQVAAEPAPAPAVEESADAPVEAPKPKRG
WWQRTFGDE
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcgcatgctaatcgatgcgcgccaccaggaagaaacccgggtggcggtgctc
aagggcaaccggattgaggaattcgatttcgaatctgccgatcacaagcagatcaagggc
aatatctatctcgctaaagtaacccgcgtcgaaccgtcgctgcaggcggccttcgtagat
ttcggcggcaatcggcacggtttcctcgccttcagcgagatccatcccgactattaccag
attcccaaggaagaccgcgaagcgttgctcgaggcggaagccgaagccgccgaggaagaa
gcgcggttgcgcgacgaggaagaagaccgcggcgagatgcccggcgacgaatacgatgcg
gacgacgagagttcggaggcgctggccgaggatctcgccgaagatggcctcgaggaagtc
gacacgtccgacaaggacgatgtcgccacgatcgaggaaggccagctcgatcgcgacgac
gatgacgacgacgattccgacgacgacgccgaaaacggcgacggcgacgagaaatcgcgc
ggtcgtggccggggcaagcgcggtcgtggccgccgccagggcaagggccgcgcgcggacc
aaggaagtcgacgaagcgcgcgccaagcgcatggccctgcgtcgccgctacaagatccag
gacgtcatccaacgccgacaggtattgctggtccaggtcgtcaaggaagagcgcggcaac
aagggcgcagcgctgaccacctatctcagcctcgccgggcgctacaccgtgctgatgccc
aattcgagccacggcggcggcatctcgcgcaagatttccagcgcctcggaccgcaagcgt
ctcaagcaggtcgtcagcgacctcagcctgccgcgaaccatgggcctcatcgtgcgcacg
gcgggcctttcgcgcaccaaacccgagatcaagcgcgatttcgattatcttgcccgcctg
tgggacgaaatccgcgaacgcacgctgtcctccagcgcgcccgcactgatacattcggac
agcgatctcatcaaacgcgcgatccgcgacatctacaatcgcgagatcgaggaagtcgtg
gtcgagggcgaggacggctacaagtcggccaagcagttcatgaagctgctgatgcccagc
cacgcgcggcgggtgaagcagtattcggacccggtgccgctgttccagcgctatggcgcg
gaagaccagctcaaggcgatgtacgatcccgtggtccagctcaaatcgggcggctatctg
gtgatcaacccgaccgaggcgctggtctcgatcgatattaactcgggtcgctccaccaag
gagcacaatatcgagcagaccgcgctgcacaccaatctcgaagccgcgcgcgagatcgcc
cgccagttgcgcctgcgcgacatggccggtctcgtggtgatcgacttcatcgaccaggag
caccactccaacacgcgcaaggtcgagaaggcgatgaaggaagcgctcaagaacgatcgt
gcgcgcatccaggtcggccgcatctccagcttcggcctgatggaaatgagccggcagcga
ctgcgcaccggcgtgctcgaggcgacgacgcgcgaatgcccgcattgcgacggcaccgga
ctggtgcgcaccgcgtcgagcgcaggtctctcggcgctccgcctgatcgaggacgaagcg
gccaagggcaagggttcggtaatccgccttgctgcgagcacggaagcggcggtttatctg
ctcaacgaaaagcgtgccgagctgatggaaatcgaacagcgctaccacgtgaccgtcgaa
gtcgtccccgaaggcgaggacgaaggcgcaaagatgacggtgtcgagccacgggccgaag
cccaaggacgcgccgcgcttcgatccgatcgtcgatgacgagatcgaagacgaagtggtc
gatgagagcgacgacgaggacagcgacgacgggagtgatgatcgcccgcgcaagaagcgc
cgccgccgtcgtggtggtcgcggacgcaacaagtcgcgtgatcgcaatgacgaacaggac
ggcgacgacagcgacgattcggacgatgacgcagaagcggatcggggtgagagcggcgaa
ggcgacgaagatgaggatcgctcgaagaagcgccgtcgtcgcggcggtcgccgccgcggc
ggtcgcggacgcggtcgccgttcggacgaggtgaacgccgaggacgccgaacagctcgaa
caggtttccgaagcggtggtcgaggatatggcggttgtcgccggtcccgaggattcgccc
gaaaccgccgaagtggcggctgacagcgaggaaaagccaaagccgaagaagcgcgctccg
cgtaagaagaaagctgcggctgacggtgaagctgctacggacactgcggcagacggcgag
accgaagaaaagcccaaaccgaagaagcgtgcgcctcgcaagaagaagagcgaagcggaa
tcggtcggtgacagcgatgcgcccagcgcagacgctgaggccgaagccaagcccgctccc
aagaaacgcgcgcctcgcaagaagaaggccgatgccgaaacggtaagcgacagtcctgcg
gaaccgcaatcagcgcgggaaactccagaagaaacgcaggttgccgcagaacccgccccc
gcacctgcggtggaagagagcgcggatgcgcctgtcgaagcgcccaagccaaagcgtggc
tggtggcagcgcactttcggcgacgaatag
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