Qipengyuania flava: CHH26_08745
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Entry
CHH26_08745 CDS
T04986
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
efv
Qipengyuania flava
Pathway
efv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
efv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CHH26_08745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efv03021
]
CHH26_08745
Transcription machinery [BR:
efv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHH26_08745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
DUF6712
Disulph_isomer
DUF4168
Motif
Other DBs
NCBI-ProteinID:
ASP30307
LinkDB
All DBs
Position
1760257..1762260
Genome browser
AA seq
667 aa
AA seq
DB search
MATKSKTKDDGDAPLIDLNEASIKKLITKAKRKGYVTYDELNDALPQGEMSSDQIEDIQS
ALSDMGVQIVESDEEAEAAAEEAEEVEEIAGAKKDTKAAAKPAAKKTATGERTDDPVRMY
LREMGAVELLSREGEIAIAKRIEAGRDMMIMGLCQSPITFHAIIQWSEALNAEEMQLREI
LDLDAMLSKEPPPEKMAEEEEDDDGEISEETAGPTIRDDDEDDSDEDGEEGEEGSSKSDD
EEEEDNTMSLAQMEAALKPDAIERFARITDLFGKFEKLQKERVDLMAKGETFTAAKEKRY
EALSEQLTAEVESVQFHATKIEFLVDNLYAFNRRLTALGGQMLRLAERHKVKRIDFLDAY
IGNELDDSWLKERAKKDKKWAAFAEKEAEAVERIRAEISDIASQTGMALEEFRRIVNMVQ
KGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRCSRQFLHDQGREPTPEEMAEK
LSMPLEKVRKVMKIAKEPISLETPIGDEEDSHLGDFIEDKNAIIPVDAAIQANLKETVTR
VLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRK
MRSFLDQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaagtcgaagaccaaggacgatggcgacgctcccctgatcgatctcaatgag
gcctcgatcaagaagctcatcaccaaggcgaagcgcaagggctacgtcacttacgacgaa
ctcaacgacgcattgccgcagggtgaaatgagttccgaccaaatcgaggacatccagtcc
gcgctgtccgacatgggcgtgcagatcgtcgagagtgacgaggaagccgaggccgcggcg
gaagaagccgaggaagtcgaagaaatcgcgggtgccaagaaggacaccaaggccgcagcc
aagccggcagcgaagaaaaccgcgaccggcgagcggaccgacgaccccgtgcgcatgtac
ctgcgcgaaatgggcgcggtcgagctgctcagtcgcgaaggcgaaatcgccatcgccaaa
cgcatcgaggcaggccgcgacatgatgatcatgggcctgtgccagagcccgatcaccttc
cacgctatcatccagtggtccgaggcgctcaacgccgaggagatgcagctgcgcgaaatc
ctcgatctcgacgctatgctttcgaaggaacccccgcccgagaaaatggcggaggaagaa
gaagacgacgacggcgagatttcggaagaaaccgctggcccgacgatccgcgacgacgat
gaagacgattcggacgaggacggagaagagggcgaggaagggtcatccaagagcgacgac
gaagaggaagaggacaacaccatgtcccttgctcagatggaagccgcgctgaagcccgac
gcgatcgagcgtttcgcccgcatcaccgatctgttcggcaagttcgaaaagctccagaag
gagcgcgtcgacctgatggccaagggagaaaccttcaccgcggccaaggaaaagagatac
gaagctctgtccgagcagctcactgccgaggtcgagagcgtccagttccatgcgaccaag
atcgagttcctggtcgacaatctctacgccttcaatcgccgcctgaccgcgttaggcggc
cagatgctgcgccttgccgaacggcacaaggtcaagcggatcgacttcctcgatgcctat
attggcaacgagctcgacgatagctggctcaaggagcgcgcgaagaaggacaagaaatgg
gcagccttcgccgagaaggaagccgaagccgtcgaacgcattcgcgccgagatttcggac
atcgccagccagaccggcatggcgctggaagaattccgccgcatcgtgaacatggtccag
aagggcgaacgtgaagcgcgtatcgccaagaaggaaatggtcgaggcgaacctgcgcctc
gtgatctcgatcgccaagaaatacaccaaccgcgggctgcagttcctggatctcatccag
gaaggcaatatcggcctgatgaaggcggtcgacaagttcgaataccgccgcggctacaag
ttcagcacctatgccacctggtggatccggcaggcgatcacccgctcgatcgccgaccag
gcgcgcacgatccgcattccggtccacatgatcgagacgatcaacaagctggtccgctgc
agccgccagttcctgcatgaccaggggcgcgaaccgacgcccgaagagatggcggagaaa
ctctccatgccgctcgagaaggtacgcaaggtgatgaagatcgcgaaggagccgatcagc
ctcgagacgccgatcggcgacgaagaagattcgcatctcggcgatttcatcgaggacaag
aatgcgatcatccccgtcgatgccgcgatccaggcgaacctcaaggaaacggtcacccgc
gtcctcgccagcctgaccccgcgcgaggaacgcgtgctgcgcatgcgcttcggtatcggc
atgaataccgatcacacgcttgaggaagtcggccagcagttctcggtgacccgcgaacgt
attcgccagatcgaagccaaggcgctgcgcaagctcaaacacccgagccgcagccgcaag
atgcgctcgttcctcgatcagtag
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integrated database retrieval system
