Qipengyuania flava: CHH26_10770
Help
Entry
CHH26_10770 CDS
T04986
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
efv
Qipengyuania flava
Brite
KEGG Orthology (KO) [BR:
efv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efv03019
]
CHH26_10770 (hrpB)
Enzymes [BR:
efv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CHH26_10770 (hrpB)
Messenger RNA biogenesis [BR:
efv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CHH26_10770 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_30
Flavi_DEAD
AAA_22
Cas3-like_C_2
AAA_19
AAA_25
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ASP31722
LinkDB
All DBs
Position
complement(2180114..2182540)
Genome browser
AA seq
808 aa
AA seq
DB search
MADLPIISVIPELLDALREQGCGVLVAPPGAGKTTAVAPALLEQDWCSGTVILTSPRRVA
ARAAAERMAQTLDEKPGETVGYVTRLDSKRSARTRVLVVTEAIFVNMILADPELAGVSAV
LFDEAHERHLDSDLGLALALESRAVLRDDLRVLVMSATIDGSRFAELLGDRAQVIESEGR
AYPLEIEWLGSSPQLPVEDAMAQAIVTAWREQDGDILGFLPGVREIERVRERLEKRLPDA
LSLPLHGQVEPAAQRAAIRRDPDGRRRIVLATAIAETSLTLDGVSVVVDAGLSRRAEFDR
AAGTTHLVTHRASQAAAAQRAGRAARQGPGVAYRLWEEGGHGGRPPYDPPEMVTADLSPL
VLSLAQWGTADPDSLAWLDPPPAASVDAARSTLAALGALDEAGRITERGTKLAQLPLDPQ
GAATILFGAEHGDAERAARIALLLQERSLGGRGEDLDVRLTRWDGDRGHKAEASRKLASR
WARRAQDLVDVKSGGEAPPPGIHLAAGKPEFIAKRRDARGEQWIAAGGRGFVLDPTSTLA
RADFIVVGDAQGQAKGARITAGIAVEEGDLERWFPERIERRKLLRWTGERVEARVERRLG
TIVLAQGPDPEPDGDAIVDMLVDKVLENPAKLIPQDLLARAAYAGIFQFSPSELHASAPI
WLRPLLAGRRDLKLASGKLTDALLGLLDWDSRTTLDRVAPREFVSPAGTSHRIDYAGEDA
PSVEVRVQALFGLERHPMIGKVPLLLKLTSPAGRPIQATRDLPGFWRGSWADVRKDMKGR
YPKHRWPEEPWAEAPSLKTKNAFSKSGG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacctgccgattatatccgtcatccccgaactgctcgatgccttgcgcgagcaa
ggatgcggcgtgctggtcgcgccaccgggggcaggcaagaccaccgcggttgctcccgcg
ctgctggaacaggattggtgcagcggcacggtcatccttacgtcgccgcgtcgtgtcgcc
gcgcgcgccgccgccgaacgcatggcgcagaccttggacgaaaagcccggcgaaactgtg
gggtatgtgacgcggctggacagcaagcgctccgcgcgcacacgcgtcctcgtcgtgacc
gaagcgattttcgtgaacatgatccttgccgatcctgaacttgcgggcgtttccgcggtg
ctgttcgacgaagcgcacgaacgccatctggacagcgatctcggactggcgctggcattg
gaaagccgcgccgtcctgcgcgatgaccttcgggttctggtcatgtcggcgaccatcgac
ggcagccgcttcgctgaattgctgggtgatcgtgcacaggtcatcgaaagcgaaggccgt
gcctatccgctggagatcgaatggctgggatcgtcgccgcagcttcctgtcgaggatgcc
atggcgcaggccatcgtaaccgcttggcgcgagcaggacggcgacatcctcggcttcctg
cccggcgtgcgcgagatagagcgggtacgcgaacggctggaaaagaggctgcccgacgcg
ctatcgttgccgttacacgggcaggtcgaaccggcggcgcagcgtgccgcgatccggcgg
gatccggacggacgtcggcggatcgtgctggcaaccgcgattgccgaaacgtcgttgacc
ttggacggggtgtcggtggtggtcgatgcgggcctgtcgcggcgggccgagttcgatcgc
gcggccgggaccacgcatctcgtcacgcaccgggcgagccaggcggccgctgcacagcgt
gcgggtcgtgcggcccggcaaggccccggggtcgcctatcgcctttgggaagaagggggc
catggcggtcggccaccctatgacccgcccgaaatggtcaccgccgacctctctcccctc
gttctgtcgctcgcgcaatggggaactgccgatccagacagccttgcgtggctcgatccg
ccgcccgcagcctcggtcgatgccgctcgctcgacacttgcggcgctgggtgcgctcgac
gaggcggggcggataaccgagcgcggtaccaagctcgcgcaactcccgctcgatccgcag
ggcgcggcgaccatcctgttcggtgcagagcatggtgatgctgaacgcgcggccaggatc
gccttattgctgcaggaacgatccctgggagggcgtggcgaagatctcgacgtgcgcctg
acgcgctgggatggcgaccgcggacacaaggcagaggccagccgcaagctggcttcgcgc
tgggcgcggcgcgcgcaggatctggttgatgtgaagagtgggggggaggccccgccgccc
ggaattcatctcgctgccggtaaacccgagtttatcgccaagcgccgcgatgcacgggga
gagcagtggattgctgcaggcggccggggcttcgtgctcgacccgacctcgacgctggcg
cgggccgatttcatcgttgtgggggatgcgcaggggcaggcaaaaggcgcgcgaattaca
gcaggcattgcagttgaggagggcgatctcgaacgctggtttcccgagcggatagaacgc
cgcaagctgctccgctggaccggcgaaagggtcgaggcgcgcgtggaacgcaggctcgga
acaatcgtgctggcgcaagggcccgacccagaaccggacggggatgcgattgtggacatg
cttgtcgataaagttctggaaaacccggcaaagctgattccgcaagatcttctcgcacgc
gcagcctatgcgggcatctttcagttttcgccgagcgagttgcatgcgtccgcaccgatc
tggctccggccattgctggcgggcaggcgcgatctcaaactggccagcggcaagctgacc
gacgccttgctcggtctgctcgactgggacagtcggaccacgctcgaccgtgtcgccccg
cgcgaattcgtttctcctgcggggacttcgcatcggatcgattatgccggcgaggatgcg
cccagcgtggaggtgcgcgtacaggcgctgttcgggctcgaaaggcatcccatgatcggt
aaggtgccattgctgctcaagctgaccagtccggccgggcgcccgatccaggcaacgcgc
gacctgcccgggttctggcgcggcagctgggctgacgtgcgcaaggatatgaaggggcgc
tatcccaagcaccgatggccggaggaaccctgggccgaggcgccgagtctgaagaccaag
aacgccttttcaaaatcgggaggctga
DBGET
integrated database retrieval system
