Qipengyuania flava: CHH26_12650
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Entry
CHH26_12650 CDS
T04986
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
efv
Qipengyuania flava
Brite
KEGG Orthology (KO) [BR:
efv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efv03009
]
CHH26_12650
Enzymes [BR:
efv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CHH26_12650
Ribosome biogenesis [BR:
efv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CHH26_12650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
YuA_Gp49
Motif
Other DBs
NCBI-ProteinID:
ASP30983
LinkDB
All DBs
Position
2537426..2538538
Genome browser
AA seq
370 aa
AA seq
DB search
MKTSDEVRSFTVAADDDGIRVDRWFKRHLPQVGFGTVSKWARTGQVRVDGKRVKPDDRLA
EGQQIRVPPGGDAPHKKDKSKRELSKAEIEQAEGMVIEKTKGALVLNKPPGLATQGGTNT
FNHVDGLLDAFAPGDEDVRPRLVHRLDKDTSGALLIARTPGSAAFFSKRFSGRSAKKIYW
ALVMGVPDIKEGVIEAPLAKQPGSGGEKMHVDHEGGQPAKTKYRVVDAAGKKAAWLELQP
LTGRTHQLRVHCAAMGHPIVGDGKYGGKEAFLTGAVSRKMHLHARRLIIDSPDGSKLDVT
AELPEHFAASMDHLGFDESASDATPMRDDPPPKSREEKKQQARQHAKNFRKSQRGPRRAR
GKPAKPRGKR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctccgacgaagtccgcagcttcaccgttgcggccgatgacgacggcattcgc
gtcgatcgctggttcaagcgccacctgccccaggtcggcttcggcacggtcagcaaatgg
gcgcgcaccgggcaggtgcgggtcgacggcaagcgtgtgaagcccgacgaccggctggcc
gagggccagcagatccgtgtcccgccgggcggcgatgcgccgcacaagaaggacaagtcc
aagcgcgaattgtccaaggccgagatcgagcaggccgagggcatggtcatcgagaagacc
aagggcgcgctggtgctcaacaagccgccgggcctggcgacacagggcggcaccaacacc
ttcaaccatgtcgacggattgctcgatgctttcgcgccgggcgatgaggacgtccgcccg
cggctggtccaccggctcgacaaggataccagtggcgcgctgctgatcgcgcggaccccg
ggcagcgcagccttcttctccaagcgtttctcgggtcgcagcgccaagaagatctactgg
gcgctcgtgatgggcgtgcccgacatcaaggaaggcgtgatcgaagccccgctcgccaag
cagcccggttcgggcggcgagaagatgcatgtcgaccatgaaggcggccagccggccaag
acgaagtatcgcgtggtcgatgctgcaggcaagaaagccgcatggctcgaactgcaaccg
ctaaccgggcgcacgcaccagttgcgcgtgcattgcgcggcgatgggtcacccgatcgtg
ggcgacggcaagtacggcggcaaggaagctttcctgaccggcgcggtaagccgcaagatg
cacctgcatgcgcggcggctgatcatcgacagtccggacggcagcaagcttgatgtgacc
gccgagttgcccgaacatttcgcagccagcatggatcacctgggattcgatgaaagcgcc
agcgatgccacgccgatgcgcgacgatccgccacccaagtcgcgcgaggaaaagaagcag
caggcgcgccagcacgccaagaacttccgcaagtcgcagcgcggcccgcgtcgcgcgcgc
ggcaagccggcaaagccccggggcaagcgctga
DBGET
integrated database retrieval system
