Enterococcus gallinarum: AL523_02380
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Entry
AL523_02380 CDS
T04148
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ega
Enterococcus gallinarum
Pathway
ega03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ega00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL523_02380 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ega03019
]
AL523_02380 (pnp)
03016 Transfer RNA biogenesis [BR:
ega03016
]
AL523_02380 (pnp)
Enzymes [BR:
ega01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AL523_02380 (pnp)
Messenger RNA biogenesis [BR:
ega03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AL523_02380 (pnp)
Transfer RNA biogenesis [BR:
ega03016
]
Prokaryotic type
tRNA degradation factors
AL523_02380 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
DUF3243
SPATA25
PCB_OB
Alpha_Helical
Motif
Other DBs
NCBI-ProteinID:
AMG48710
LinkDB
All DBs
Position
complement(509964..512081)
Genome browser
AA seq
705 aa
AA seq
DB search
MTEKQVFKTTWGGRPLEVEVGQLAKQANGAVLVRYGDTVVLSAAVASKEAKDTDFFPLTI
NYEEKMYAVGKVPGGFIKREGRPSTEATLTARLIDRPIRPMFAEGFRNEVQVTNIVMSVE
QDCTPAMAAMLGSSLALSISDIPFDGPIAGVDVGRVNGEYVLNPTVEQAEQTDIELTVAG
TKKAINMVESGAKEVSEEDMLGALLFGFDAIQELVAFQEEVVAAVGKPKMEVKLLQVDAD
LKKEIFDGYYQTMKTAVMTEEKLAREDEIDKVKDTVKEVYAEKFAGHEEEAQFLKEVKQI
AEDLEKDVVRELITIDKIRPDGRQLDEIRPLASEVGLLPRVHGSGLFTRGQTQALSACTL
APLGEHQIIDGLGVEESKRFIHHYNFPQFSVGSTGRAGSPGRREIGHGALGERALAQVIP
DETDFPYTIRLVAEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLVSDGENYT
ILTDIQGLEDHLGDMDFKVAGTKDGITALQMDIKIQGITEQILTEALDQAKKARMEILNE
LTSTLAAPREELSQYAPKIEMIQIDPAKIKDVIGKGGDTINGIIDETGVKIDIDQDGKVS
IASADAEMIQKAIKIIEELTKEVKVGEVYLGKVVRVEKFGAFVNLIKGKDGLVHISQLAN
ERVNKVEDVVKEGDEILVKVTEIDKQGRVNLSRKALLNEDKAEQK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaacaagtattcaaaacaacttggggcggccgcccattagaagtagaagtt
ggccaattagccaaacaagcaaacggagctgtattggttcgttatggcgatacggttgtc
ctaagtgcagcggttgcatctaaggaagcaaaagataccgactttttcccattaacaatc
aattacgaagaaaaaatgtatgctgtagggaaagtacctggtggctttatcaaacgggaa
ggacgtccaagtacggaagcaaccttgactgcccgcttgatcgatcgtccgatccgtcca
atgtttgcggaaggtttccgtaacgaagtacaagtaacaaacatcgtaatgagtgttgaa
caagattgtacgccagcaatggcggcaatgttaggttcttctttagcattgtctatttca
gatatcccgtttgacggaccgatcgctggtgttgatgttggtcgggtcaatggcgagtac
gtcttgaatccaacagtagaacaagcagaacaaaccgatatcgaattgacagtagctgga
acgaaaaaagccatcaacatggttgaatcaggcgcgaaagaagtttctgaagaagacatg
ttaggtgcgttattattcggttttgatgctatccaagaattggttgccttccaagaagaa
gttgtcgcagctgtgggcaaaccaaaaatggaagtcaaattgttacaagtagatgctgac
ttgaaaaaagaaattttcgacggctactaccaaacaatgaaaactgctgttatgactgaa
gaaaaattggctcgtgaagacgagatcgataaagtcaaagacacagtgaaagaagtgtat
gcagaaaaatttgctggacatgaagaggaagcacaattcttgaaagaagtgaaacaaatc
gcggaagatcttgaaaaagatgtggttcgcgaattgattactatcgacaagattcgtccg
gatggtcgtcaattagacgaaatccgtccactggcatcagaagttggcttattgccacgt
gttcatggttctggtctatttactcggggacaaacccaagcattgtccgcttgtacgtta
gcacctttaggagaacaccaaatcattgatggattaggggttgaagaatcaaaacgattc
atccaccattacaacttccctcaattttctgttggttcgactggtcgtgccggctcacca
ggacgtcgtgaaatcggtcatggtgcattaggcgaacgtgccttagcacaagtgattcct
gatgaaacagacttcccttacacaatccgtctcgttgcagaagtattagaatcaaatggt
tcttcttctcaagcaagtatttgtgctggaactttagcattgatggatgcaggggtacca
atcaaagcaccagttgcaggtatcgcaatgggacttgtatctgatggtgaaaactacacg
atcttaactgatattcaaggcttagaagatcaccttggcgatatggactttaaagttgct
ggaaccaaagatgggatcactgcgttacaaatggatatcaagattcaaggaatcactgaa
caaatcttgacagaagcattagatcaagcgaaaaaagcacggatggaaatcttaaatgaa
ttgacatcaacattggctgctcctcgtgaagagttaagccaatatgcaccgaagatcgaa
atgatccaaatcgatcctgcgaagatcaaagatgtaatcggtaaaggcggcgacaccatc
aatggcatcattgatgaaactggcgtgaaaatcgatattgatcaagacggaaaagtttcg
attgcttctgctgatgcagaaatgatccaaaaagctatcaagattattgaagaattgacg
aaagaagtaaaagttggcgaagtgtaccttgggaaagttgtccgtgttgaaaaattcggt
gcgtttgtcaacttgatcaaaggcaaagacggcttagttcacatttcacaacttgcgaac
gaacgggtcaacaaagtagaagacgttgtcaaagaaggcgacgaaatcttagtgaaggtc
acagaaatcgacaaacaaggccgtgtgaacctttcaagaaaagcactattgaacgaagat
aaagcagagcaaaaataa
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