Enterococcus gallinarum: AL523_02635
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Entry
AL523_02635 CDS
T04148
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ega
Enterococcus gallinarum
Pathway
ega03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ega00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL523_02635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ega03019
]
AL523_02635
03009 Ribosome biogenesis [BR:
ega03009
]
AL523_02635
Enzymes [BR:
ega01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AL523_02635
Messenger RNA biogenesis [BR:
ega03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AL523_02635
Ribosome biogenesis [BR:
ega03009
]
Prokaryotic type
rRNA helicases
AL523_02635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMG48760
LinkDB
All DBs
Position
complement(571803..573329)
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AA seq
508 aa
AA seq
DB search
MKFKDLELSNELLTSVERAGFEEATPIQEATIPLALAGKDVIGQAQTGTGKTAAFGLPML
EKIDPANHQLQGLVIAPTRELAIQTQEELYRLGKDKKIRVQAVYGGADIGRQIRQLKDRP
HIVVGTPGRMLDHINRHTLKLGTVETLVLDEADEMLNMGFLEDIEKIISQVPDVRQTLLF
SATMPPAIKNIGVKFMKEPEHVQIKAKEMTADLIDQYYVRSKDYEKFDVMTRLLDVQSPE
LTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKSGQLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMSYLHVIENLTKK
RMTPMRPPTEKEAFKGQLGAAIESVETKLDENGLDKYLQAADDLLERYSAQDLAALLLKT
MAKDPADLEPVKITPERPLPQGKKSFNKNGRRSNNSNGGNRNRKENGGNRGGGNGNKARG
NYSKDGARKNNRRSNDKKRGFVIRNNQD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaaagatctagaattatccaacgaattattgacttctgttgagcgtgccggc
tttgaagaagcaacacccatccaagaagcaacgattccattagccttagcaggcaaagac
gtgatcggtcaagcacagaccggtactggtaaaaccgccgcatttggtttgccaatgtta
gaaaaaatcgacccagcgaaccatcaactacaaggattagtgattgccccaacccgtgaa
ttagcgatccaaacccaagaagaattgtatcgtcttggtaaagacaaaaaaattcgcgtt
caagcagtttacggtggagccgatatcggccgtcaaatccgtcaattaaaagatcgtccc
catatcgtagttggtacgccaggacgtatgttagaccatatcaaccgccacaccttaaaa
ttaggtacggttgaaacgcttgtattagatgaagcagacgaaatgttgaacatgggcttc
ttggaagatattgaaaaaatcatcagccaagtgccagatgttcgtcaaacgttgctattt
tcagcaacaatgccgccagcaatcaaaaatatcggcgtgaaattcatgaaagagcctgaa
catgttcaaatcaaagccaaagaaatgaccgctgatttgattgatcaatattatgttcgc
tcaaaagattatgaaaaattcgatgtcatgactcgtttgttggatgtgcaatcaccagaa
ttgacgatcgttttcggtcgtacgaaacgtcgtgttgatgaattggcacgtggtttagaa
gctcgtggctacaaagctgaaggcattcatggggacctttctcaacaaaaacggatgagc
gttttacgttcatttaagagtggtcaattagatatcttagttgccacagacgtagcagct
cgcggattagatatttctggtgttacacacgtttacaactacgacatccctcaagatcct
gaaagctatgttcaccggatcggacgtacaggtcgtgccggaaaaggcggaatgtcagtg
actttcgttacaccaaacgaaatgagctacttgcatgtcattgaaaacttaacgaaaaaa
cggatgacaccaatgcgcccaccaaccgaaaaagaagcatttaaaggtcaattaggtgcc
gcaatcgaatctgttgaaacaaaattggatgaaaatggtttggataaatacttgcaagca
gccgacgatcttttggaacgttattctgcacaagatttagcagcactgcttctaaaaaca
atggcgaaagatccagctgatttagaaccagtcaaaattacaccagaacgcccattacct
caaggaaaaaaatcattcaataaaaacggacgtcgcagcaataacagcaatggcggcaat
cgtaaccgcaaagaaaacggtgggaaccgtggcggcggcaacggcaataaagcccgtggt
aactattcaaaagatggtgcccgtaaaaacaatcgccgtagcaacgacaaaaaacgcggt
ttcgttatcagaaataaccaagactaa
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