Enterococcus gallinarum: AL523_05245
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Entry
AL523_05245 CDS
T04148
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ega
Enterococcus gallinarum
Pathway
ega03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ega00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL523_05245 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ega03019
]
AL523_05245 (rny)
Messenger RNA biogenesis [BR:
ega03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AL523_05245 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
AMG49201
LinkDB
All DBs
Position
1103114..1104688
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AA seq
524 aa
AA seq
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MEVDSLELLYILLAIIGLIVGLGLGVYVTKSRHEKEINGAQNSAAGIIESAKKEAETLKK
EALLEAKEENQKYRSEIESELKESKLDLKSQENRLLQREQVLDRKDDSLEKRERSLEDKE
GRLSEKQQLIDEREKEVENLIDGQQKELERIAALSRDEAKELIMKSTEEELNHELTIMVK
ESEQRAKEEADRKAKNLLSLAIQRCAADQVSETTVSVVSLPNDEMKGRIIGREGRNIRTL
ETLTGIDLIIDDTPEAVVLSGFDPIRREIARMTLEKLIQDGRIHPARIEEMVEKSRKEMD
EHIREYGEQAAFEVGAHTLHPDLIKILGRLRFRTSYGQNVLNHSIEVAKLTGVLAAELGE
DIQLAKRAGLLHDIGKALDHEIEGSHVEIGAELAAKYKENGVVINAIASHHGDVEATSVI
SVLVAAADALSAARPGARSESLENYIRRLQNLENIANGFKGVDSSFAVQAGREVRVMVKP
EEISDLDAVRLVRDIRKKIEDDLDYPGHIKVTVIRETRATDYAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggattcattggaactactttacattctcctcgctatcatcggtttaattgtc
ggtcttggattaggagtttatgtgacgaaatctcgtcatgagaaagaaatcaacggcgcc
caaaattctgcagctggaattatcgaaagcgctaagaaagaagcagaaactcttaaaaaa
gaagcattgttagaagctaaggaagaaaatcagaagtatcggtcagagattgaaagtgag
ttgaaagaaagcaaacttgatttaaaatcacaagaaaatcgtttactccaaagagaacaa
gtacttgatcgtaaggacgattctttggaaaaacgagaacgctcacttgaagataaagaa
ggcagacttagtgagaaacaacaattaattgacgagcgagaaaaagaagtagaaaactta
atcgatggacaacagaaagaattagagcgcatcgccgcgctgtctagagatgaagcaaaa
gagttgatcatgaaatcaacggaagaggaattgaaccatgaattaacgatcatggtcaaa
gaatctgaacagcgtgcgaaggaagaagcagatcgaaaagcaaaaaatctcttgtcccta
gcaatccaacgttgtgccgcagaccaagtgtctgaaaccacggtatcggtcgtatcatta
ccaaatgatgagatgaaaggtcgaatcatcggaagagaaggtcggaacattcggaccctt
gaaacattgacagggatcgatttgatcatcgatgacacgccagaagcagtcgtcttatca
ggatttgatccgattcgccgtgaaattgctcgtatgacccttgaaaaactgattcaagac
ggccggatccatccagctcgaattgaagaaatggtcgaaaaatctcggaaagaaatggat
gagcatattcgtgaatatggggaacaagcagcctttgaagtcggtgctcacacccttcat
ccagacttgatcaagattttaggtcgtttgcgtttccgtaccagctacggacaaaacgtc
ttgaaccactcgatcgaagtcgcaaaactaaccggtgttcttgccgcagaattaggcgaa
gatattcagttagctaaacgtgccggactcttgcatgatatcgggaaagcccttgaccat
gaaatcgaaggctctcacgttgagatcggggctgagttagctgccaaatacaaagaaaat
ggtgtggtgatcaatgcgatcgcttctcaccatggagatgttgaagcaacatcggttatc
tctgttttagttgcagccgcagatgccttgtcagcagcccgtccaggtgcccgcagcgaa
tcattggaaaattatattcgccgcttgcaaaacctagaaaatatcgccaacggcttcaaa
ggtgtcgattccagttttgccgtccaagccggacgtgaagtccgtgtaatggtcaaacca
gaagagatttctgatttggatgctgtacgattggttcgcgacatccgcaagaagatcgaa
gacgatttggattacccaggtcatatcaaagtaaccgttattcgcgagacccgcgcaacg
gattacgccaaatag
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