Enterococcus gallinarum: AL523_08425
Help
Entry
AL523_08425 CDS
T04148
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ega
Enterococcus gallinarum
Pathway
ega03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ega00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL523_08425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ega03019
]
AL523_08425
Messenger RNA biogenesis [BR:
ega03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AL523_08425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AMG49792
LinkDB
All DBs
Position
complement(1795572..1797251)
Genome browser
AA seq
559 aa
AA seq
DB search
MKVSLKNNETGVFGVGGLGEIGKNCYGVQFQDEIILIDAGIKFPEDELLGIDYVISDYSY
IVQNLPKVKGLIVTHGHEDHIGGIPYLLREANIPIYAGPLALALITNKLDEHGLLRDAEL
HEINEDTVIRFRKTSISFFRTTHSIPDALGVVVKTPSGNIVATGDFKFDFTPVGEPANLH
KMAKIGEEGVLCLLSDSTNAEIPTFTKSEKTIGSSIQKIFEKIDGRIIFASFASNIFRLQ
QAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVESHEINRLPANETMILCTG
SQGEPMAALSRIANGTHRQIQIHPDDTVIFSSSPIPGNTTSVNQLINLLLEAGANVIHGK
LNNIHTSGHGGQEEQKLMLRLMKPKFFMPVHGEFRMLNIHTQLAQDVGVPKENCFIMENG
DMLALTADTARLAGHFNANDVYVDGSGIGDIGNVVLRDRRILSEEGLVLAVATVDVAKKE
VLAGPDILSRGFVYMRESGEMINEAQQILFRALREVLNQPDPTEHKLREAMSSALQPFLF
EKTERHPMILSMIMTPDDL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtttcgctgaaaaataatgagaccggcgtattcggcgtcggtggacttggcgaa
atcggaaaaaactgttatggggttcaattccaagatgagatcatcttaattgacgcggga
atcaaattccccgaagatgaactgcttgggatcgactatgtcatttccgattatagctac
atcgttcaaaatttaccgaaagtcaaaggcttgatcgttactcatggtcacgaagaccat
attggcggaatcccttacttgttgcgggaagccaatatcccaatctatgcgggaccattg
gcacttgctttgatcaccaacaaattagatgagcatggcttattgcgggacgcggaatta
cacgaaatcaatgaagatacggtgattcgtttccgtaaaacgtccatcagcttcttccga
acgacccacagtatccctgatgctttaggtgtcgttgtcaaaacgccttctggcaatatc
gtcgcaactggcgatttcaagtttgactttacgcctgtgggcgaaccagcaaacttgcac
aaaatggcaaaaattggtgaagaaggcgtcctttgcctcctttccgatagtaccaatgca
gaaattccaacctttaccaaatcagaaaaaacgatcggcagctcgattcaaaagattttt
gaaaaaatcgatggtcggatcatttttgccagctttgcttccaatattttccggctccaa
caagctgcagatgcggcggttgcgactggacgtaaaatcgccgtttttggacgcagtatg
gaaaatgcgatcgtcaacggacagcgccttggctatatcaaggtgccagatggtacattt
gtggaatctcatgagatcaatcgtttgcctgcaaatgaaacgatgatcctttgtacgggt
tctcaaggagagccgatggctgctttgagccggattgccaacgggactcaccgtcaaatc
caaattcacccagatgataccgtgattttctcaagctcaccgattccaggaaataccacg
agtgtcaatcagctgatcaacttgctgttggaagctggcgcaaacgtgatccatggcaaa
ttgaacaacatccatacttctggtcatggtggccaagaagaacaaaaactgatgttgcgt
ctaatgaagccaaaattctttatgcctgtccacggggaatttcggatgctgaacatccac
acccagttggcacaagatgtcggtgtaccaaaagaaaattgtttcattatggaaaatggt
gacatgttggccttaacagcggataccgctcgcttggctggtcatttcaatgccaatgat
gtttatgttgacggcagcggtatcggtgatatcggaaatgtcgtcttacgagatcgtcgt
attctttcagaagaaggcctcgtcttagcggtagcgacagtcgatgtggcgaagaaagaa
gttcttgctggaccagatattctttctcgtgggtttgtttacatgcgggaatccggcgag
atgatcaacgaagcccaacaaattctcttccgtgcgttgcgagaagtcttgaaccaacca
gacccaacagaacacaaattaagagaagcgatgtcatcggcgttacagccattcctattt
gaaaaaaccgagcgtcatccaatgatcctttcaatgatcatgacaccggatgatttatag
DBGET
integrated database retrieval system
