Enterococcus gallinarum: AL523_10225
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Entry
AL523_10225 CDS
T04148
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ega
Enterococcus gallinarum
Pathway
ega03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ega00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL523_10225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ega03019
]
AL523_10225
03400 DNA repair and recombination proteins [BR:
ega03400
]
AL523_10225
Enzymes [BR:
ega01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL523_10225
Messenger RNA biogenesis [BR:
ega03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AL523_10225
DNA repair and recombination proteins [BR:
ega03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AL523_10225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF5838
Glyco_hydro_57
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMG50104
LinkDB
All DBs
Position
2188221..2189603
Genome browser
AA seq
460 aa
AA seq
DB search
MLENALNQYFGFKTFRQGQKEVIESVLAQQDTLAILPTGNGKSLCYQLPGYLIDGIVIII
SPLVSLMEDQVYGLQKQGEKRAIAFNSQLDPTDRHYVMQHLSQYKFLFLSPEMIVQEAIL
QQLERAKIAMLVVDEAHCVSQWGIDFRPEYLQLGEVKKRLKTPVTLALTATATAQVEADI
RQVLLAKNANVYRYSMNRSNIGLFVEKTSDKDAALADYLSRLGGAGIIYCSTRSKVEEVY
NKLRQRYSVGYYHGGLASDQRKTLQQQFSQNKLKLLVATNAFGMGINKEDIRFVIHYDLP
DSLENYSQEIGRAGRDGKQSSAILLYQEHDEQIHYFFQRENKEERRALERMDQKKMKGPL
TPLQEKWQKKMKELGAAFWLETLKQNEQQKQEQLQKMLAYIHFTGCRRQFLLAHFGEEAS
ANPYCCDNDGIELAVEEELLEKKVILHWQERLIKIFKDIN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaacgcactgaatcagtactttggcttcaaaacatttcgtcaaggacaaaaa
gaagtcatcgaaagtgttttagcgcagcaagatacgttagcgattttgcctaccgggaat
ggcaaaagtctctgttatcagctgccagggtacctcatagatggcatcgtaatcattatc
tcaccgcttgtttctttaatggaagatcaagtctatggcctacaaaagcaaggggaaaaa
cgcgcgattgcgtttaatagtcaactagaccctaccgatcgtcactatgtgatgcagcat
ttatcgcagtacaaatttttgttcttaagtccagaaatgatcgtgcaagaagccattttg
cagcaactcgaacgagctaagatcgctatgctcgtggtggatgaagctcattgtgtttcc
caatggggcattgattttcgaccagagtacttgcagcttggtgaagtaaaaaaacgtttg
aagacacccgtcacattagcattgacggctactgctacggcgcaagtcgaagcagatatt
cggcaagtgttgttagcaaagaatgccaatgtctaccgttattcgatgaaccgcagcaat
atcggcttgttcgtagagaaaacgtcagacaaagatgcggcattagcagactatctcagc
cgcttaggcggggctgggatcatctattgttccacaagaagcaaagtcgaagaagtctat
aacaaactgcgtcagcgctattcggtaggctattatcatggtggtctagcgagcgatcaa
agaaaaacgttgcagcagcagttttctcagaataaactaaaattgctcgtcgcaaccaat
gcgtttgggatggggatcaataaagaagatattcgttttgtgatccattatgacttgcct
gattcgctggaaaactacagtcaggaaatcggtcgagcaggccgcgatggcaaacaaagc
agtgcgatcttgctttatcaggaacacgatgagcagattcactacttctttcagcgagaa
aacaaagaagaacgccgtgctttagaacgaatggatcagaaaaagatgaaaggacctttg
acaccgctgcaagaaaaatggcagaagaagatgaaggagttgggggctgcgttttggctg
gaaacgctaaaacaaaacgaacagcaaaagcaagaacaattacaaaaaatgttggcttat
attcattttaccggctgtcgtcgccagtttttattggcgcactttggggaagaagcatca
gcaaatccttattgttgcgacaatgacgggatcgaattggcagtggaagaagagctttta
gaaaaaaaagtcatccttcattggcaagaacgtttaataaaaatttttaaagatataaat
tga
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