Enterococcus gallinarum: AL523_11245
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Entry
AL523_11245 CDS
T04148
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ega
Enterococcus gallinarum
Pathway
ega03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ega00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AL523_11245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ega03400
]
AL523_11245
Enzymes [BR:
ega01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AL523_11245
DNA repair and recombination proteins [BR:
ega03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL523_11245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_28
AAA_12
HHH_8
HHH
nSTAND3
AAA_16
NTPase_1
UvrD_C
T2SSE
CbiA
RsgA_GTPase
NPHP3_N
IMS_HHH
AAA
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AMG50291
LinkDB
All DBs
Position
2416814..2419474
Genome browser
AA seq
886 aa
AA seq
DB search
MIPERTFFVGHVAAIFFQNPSNFYKVLLVKVTENNADYKDSEIVVTGSFGEIQEEEKYRF
FGELVNHPKYGVQLKAESYQQEQPTSEQGLIAYLSGEKFPGIGKKTAEKIVDLLGEEAID
RMLEEPALLEQIPGLNESKQKMILDTVRQNHGMDQVIVGLSRYGFGSQLSFAIYQAYKNE
ALSIIEENPYQLVEDIEGIGFKRADGIAEQLGIEASSPQRFRAAVLHQIFAQSLQTGNTF
IHAQDLLEQTLRLLETSRPIEIAPDDLASTIIHLVEEGKIQQEETRLYENSLYFSEWGIA
SSIERLLSRKKEIVYPEKKISKTLRKIEKHLGITYGSSQEEAIKEAIRSPLFILTGGPGT
GKTTVINGIVQLFAELNDLDLEPSKYSDETFPILLAAPTGRAAKRMNETTGLPSGTIHRL
LGLNGREKAPSISPKELEGGLLIVDEMSMVDTWLANTLFKSIPTNMQVIFVGDKDQLPSV
GPGQVLHDLLAIDAIPKQELTEIYRQGDGSSIIPLAHAIKNGQLPADFTQNQKDRSFFAC
DAYKIEPLIAQIVKRAKDKGYTPQDIQVLAPMYRGAAGIDALNKMMQEIFNPNDGTKKEV
TFNDTVYRIGDKVLQLVNSPEDNVFNGDMGQIVGITLAKQSEDKVDELVIQFDANEVTYK
RNEWNKITLSYCCSIHKSQGSEFQMVILPMVHQYQRMLQRNLLYTAVTRSKEMLILLGEP
QAYQTCVSHESATRLTTLKERINGTEEMTPLQRAKLAQFEEADDPFYNDSSENTKAKMVA
SKPKENPSTEAAANQQATEKSPDSGLDLFAFAEPEPSAPNQTETAKPLSGDKVLSEGTTG
EEALIEETQNDGVLTLTMVKKHLVDPMIGMKDCSPYDFMPVKNEGL
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgattccagaaagaacgttttttgtcggccatgttgccgccatctttttccagaatccc
agcaatttttataaagtactattagttaaagtcactgagaataatgccgactacaaagac
tcggagatcgtcgttactggtagtttcggcgaaatccaagaagaggaaaagtatcggttt
tttggtgagctggtcaatcatcccaagtatggcgtccagttgaaggccgaaagctaccaa
caagaacaaccgacctctgaacaagggttgatcgcctacctttctggagaaaaatttcct
gggatcggcaagaagaccgctgaaaaaatcgttgatcttttaggagaagaagcgatcgac
cggatgctggaagaaccggcattgttggagcagattccagggttaaatgaaagtaagcaa
aaaatgattttagataccgttcggcaaaaccatgggatggatcaagtaatcgttggcttg
agtcgctatggctttggtagccagctatcttttgctatctatcaagcctacaaaaatgag
gcgctatccattattgaggagaatccatatcagctggtggaagacattgaaggcattggc
tttaaacgcgcagatggcatcgctgaacagctggggatcgaagcttcgtcaccgcaacgg
tttcgagcggcggtcttgcatcaaatcttcgcccagtccttgcagacgggcaataccttt
atccacgcccaagatttgttagagcagacactgcgcctattagaaacgagccgccccatt
gagattgcgcctgacgatttggcatcaacgatcattcatctagtggaagaaggaaagatc
caacaagaagaaacccgtttatatgaaaatagtttgtacttttctgaatggggaattgcc
agttccatcgaacgcttgctttcccgcaaaaaagaaatcgtctatcctgagaaaaaaatc
agtaaaacgttacgtaaaatagaaaagcacttaggcatcacctatggttcctcgcaagaa
gaagcgatcaaagaagcaatccgatcgccattgtttattttgacaggtggcccaggtact
gggaaaacaacagtgatcaatgggatcgtacaattatttgctgagttgaacgatttggac
ttagaaccatcaaaatacagcgacgaaacctttccgattctcttggcagcaccgactggt
cgagccgccaaacggatgaacgaaacgactggtttgccaagtggtacgatccatcgtttg
ttaggattgaatggccgtgaaaaagcaccatcgattagtcccaaagagttagaaggcggt
ttactgatcgtcgatgagatgtcaatggtcgatacgtggttggcgaatacgctctttaag
tcgatccctacaaacatgcaagtgatttttgtgggggataaagatcagcttccttctgtg
ggaccaggacaagtccttcatgatttgctagcgatcgatgcgatcccgaaacaagaattg
acggaaatctatcgtcaaggagatggatcaagtattattccactggcccacgccatcaaa
aacgggcagctgcctgctgattttacacaaaaccaaaaagatcgttctttctttgcttgt
gatgcgtacaagatcgaaccgttgatcgctcagatcgtgaaacgggcgaaagacaaaggt
tatacgccgcaagatattcaagtgttggcgccgatgtatcgtggggcagctgggatcgat
gctctgaataaaatgatgcaagagatttttaaccccaacgatggaaccaaaaaagaggtc
accttcaatgatacggtgtatcgtatcggcgataaggtcttgcagttggtaaactctcct
gaagataacgtgtttaatggcgatatgggccaaatcgttgggatcactctagccaaacag
tcggaagacaaggttgacgaactggtcattcaatttgatgccaatgaagtgacctataag
cgtaatgaatggaacaagatcacattatcctactgttgttcgatccataaatcccaaggt
agtgaatttcaaatggttattttgccgatggttcatcaataccagcgtatgctgcagcgc
aatttgctatataccgctgtgactcgcagcaaagagatgctgattttacttggtgaaccg
caagcctaccaaacctgtgtcagtcacgaatctgccactcgcttaacgacattaaaagaa
cgtatcaatggcacggaagaaatgacgccgctgcaacgggcgaaattggctcagtttgag
gaagccgatgatccgttttataatgattcctctgagaacacgaaggcaaaaatggtagct
tcgaagccaaaggaaaatcccagcactgaagctgctgctaaccagcaagcgacagaaaag
tcaccagatagtgggttggacttgtttgcttttgccgagcctgagccgtcggcaccaaat
cagacagaaacggccaagcctctgtcaggggataaggtcctaagtgaagggactacgggg
gaagaagcactcatcgaagaaacgcaaaacgatggtgtgctgaccttaacgatggtcaaa
aagcatttagtagatccaatgattgggatgaaggactgttctccgtacgactttatgccc
gtaaaaaacgagggattataa
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