Enterococcus gallinarum: AL523_11555
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Entry
AL523_11555 CDS
T04148
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ega
Enterococcus gallinarum
Pathway
ega03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ega00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL523_11555 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ega03019
]
AL523_11555 (recQ)
03400 DNA repair and recombination proteins [BR:
ega03400
]
AL523_11555 (recQ)
Enzymes [BR:
ega01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL523_11555 (recQ)
Messenger RNA biogenesis [BR:
ega03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AL523_11555 (recQ)
DNA repair and recombination proteins [BR:
ega03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AL523_11555 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AMG50348
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All DBs
Position
2479317..2481083
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AA seq
588 aa
AA seq
DB search
MQTIQTVLKEHFGYSQFREGQETIIQSILTQQNVLGIMPTGGGKSICYQLPALLLDGVTL
VISPLISLMKDQVDSLVDMGIPAAYINSSLTGAQINQRLQEARQGRIKLLYVSPERLDSE
SFRYSLRQMPIALLAVDEAHCISQWGHDFRPSYLRLAETIENWEQKPTIVALTATATPKV
AEDIENLLSIPAENQVKTGFARENLAFQVVKDQKDTYITTYLKMNQGQSGIIYASTRKEV
ERIYHLLKHERVSVGYYHGGLSEEERSFFQEEFLYDRLQVMVATNAFGMGINKSNVRFVI
HAQIPGNLESYYQEAGRAGRDGEPSDAILLYAPQDMQIQQFFIDQSESDILYRQNEYLKL
REMSQYGHTQLCLQRYILRYFGEDGSDCGRCSNCLDEREQVDITVDTQKVLSCVKRMGER
FGKALVGKVLTGSGDQKVKQWGFEKLPTYGLMKDWSQKEVNQLIDYLTASGYLLPSEGQY
PLLSVTNAGIDVLLGKAKVYRKQTKVKQLVVDDELFDQLRTLRLNLAQEQNLPPYVVFSD
KTLRELAEVQPKTPIDFLQIKGVGQNKLDKYGDAFLALLSEYEKTESD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactattcaaacagtcttaaaagaacattttggctattcacagtttcgtgaaggt
caagagacgattattcaatctattttaacacaacaaaatgttttgggaatcatgcccaca
ggtggagggaaatccatttgttatcaattgccagcgctcttgctggatggagtgaccttg
gtcatctcccctttgatttcattaatgaaagaccaagtagatagcctcgttgatatgggg
atcccagcagcgtatatcaattcttccttgacaggagcacagatcaatcaacgcttgcaa
gaagcacgccaagggcgaatcaaactgctttatgtttcgccagaacgcttagactcagaa
tctttccgctactcattgcggcagatgccgatcgctttattggccgttgatgaagcccac
tgtatttcccaatggggacatgattttcgcccgagctatctgcgactcgccgaaacgatc
gaaaactgggagcagaagccaacgatcgttgcccttaccgcgacagctacacccaaagtt
gccgaagacatcgaaaacttactttcaattccggcagaaaatcaagtcaaaaccgggttt
gctcgggaaaatttggcttttcaagtcgtcaaggatcaaaaagatacctacatcacaacg
tatttgaaaatgaaccaaggacaatcaggtatcatttacgccagtacccgcaaggaagtg
gaacggatctatcacctgttgaaacatgaacgcgtgtccgtcgggtattaccatggcgga
ctttcagaagaagagcgctcatttttccaagaagaatttctttatgaccgcctgcaagtg
atggtagcgaccaatgcattcgggatgggaatcaacaaaagcaatgtccgtttcgtgatc
catgcccagatacctggaaatttggagtcttattatcaggaagccgggcgtgccggacga
gacggcgaacccagtgatgcgatcttactttatgctccacaagacatgcagattcagcaa
ttctttatcgatcaatccgaatcagatattctttatcgccaaaacgaatacttgaaattg
cgggagatgagccaatacggacatacccaactgtgcttacagcgctatattttgcgttat
tttggagaagatggttccgattgcggtcgttgcagcaattgccttgatgaaagagaacaa
gtggatatcacagtggatacacaaaaagtgttgtcatgtgtgaaacgaatgggcgaacgc
ttcgggaaagccttggtggggaaagtgctaacgggctctggcgaccaaaaagtcaaacag
tggggctttgaaaagttaccaacttatggattaatgaaagattggtctcaaaaggaagtc
aatcagctgatcgattatttaacagcatcagggtatcttttgccgtctgaagggcaatac
cctttgttaagtgtgaccaatgcggggattgatgtgttgcttggaaaagcaaaagtatat
agaaaacaaaccaaagtcaaacagttagtggttgatgatgaactgttcgatcaactgcgc
accttacgattgaatctcgcacaagaacaaaatttgccgccgtatgtcgttttttctgat
aaaacactgcgagaattggcggaagttcagccaaaaacgccgatcgattttttacagatc
aaaggggttggccaaaacaaattggataagtatggcgatgcctttttagcattgctttct
gaatacgaaaagacggaaagtgactaa
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