Eggerthella guodeyinii: GS424_004130
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Entry
GS424_004130 CDS
T07376
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
egd
Eggerthella guodeyinii
Pathway
egd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GS424_004130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egd03021
]
GS424_004130
03400 DNA repair and recombination proteins [BR:
egd03400
]
GS424_004130
Enzymes [BR:
egd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GS424_004130
Transcription machinery [BR:
egd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GS424_004130
DNA repair and recombination proteins [BR:
egd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GS424_004130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_A_CTD
HHH_5
DNA_pol_lambd_f
PGM1_C
Motif
Other DBs
NCBI-ProteinID:
QOS69046
UniProt:
A0A6L7IU89
LinkDB
All DBs
Position
1025013..1029425
Genome browser
AA seq
1470 aa
AA seq
DB search
MTTEFDVSNFDALRISLANAEDVRSWSRGEVKKPETINYRTLKPEKDGLFCEKIFGPTKD
WECACGKYKRVRFKGIVCERCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGSPSRLGYL
LDIAPKELEKVLYFASSIITSVDKEAREEDADELRDELAADLEELDAERDRLVEATRKLS
VDYVPEDDDFVDDVDEDERMTAEEVDEEIADIYEEFNERKALRQDAFDAFMKIEPKQLVP
DEALYREMRLNYRDYFTGGMGAESVRDLLDAMDLAATADELRDVIANGKGQKRAKAIKRL
KVVDAFLKSENKPTDMILDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKR
LLDLGAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQN
LLGKRVDYSGRSVIVVGPQLKLHQCGLPSQMALELFKPFVMKRLVELEYAANIKAAKRAV
DRGASYVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCTAFNADF
DGDQMAVHVPLGAEAQAEARVLMLSANNIKSPAHGRPLTVPTQDMIIGLYYLTAARDGFE
GEGRFFIDFDDAMNAYDARAELDLQAKIWVRLSKDTQVATAFGVFEEHKAGERIETTIGR
ITFNNVLPEDYPYLNYEMNKKEISRLVEDVCNRYELSNVPAILDGLKDAGFHYATRAGVT
VSVYDATVPPNKGEILAAADEKVAAIDEDYEMGLMSPDERHKQVVDIWNAANEEVGEAMA
ENFDKFNPIYMMAFSGARGNIKQIRQLAGMRGLMSDPKGEIIDRPIKANFREGLSVLEYF
ISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIIREIDCGTTDGVPYPLHNEKGDVDE
NLIGRCLLDDVAGTDGVVLLGAGEYITHMDQLKAMDAAGVETLVIRTVMTCHAEHGVCQK
CYGWDLATSRPVNIGTAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITHGLPRVQELFE
ARKPKGLAILAEISGTLQISGDKQSKTITIHDQQGNFREYVVSARAQMLPGVTDGCEVKV
GQQLTKGSVNPHDLLRLTDPNTTLRYIVSQVQGVYVSQGVDINDKHIEVIARQMLRKVAV
MDAGESDYLPGRQVNRFEFEDAANALIAEGKEPPVGQPLLLGITKASLATDSFLSAASFQ
ETTKVLTDAAIEGKVDHLAGLKENVIIGKPIPAGTGLSRYREVGLTYKGRPVAPVLGETL
PDFAPEALRDIEELLPQPQDWSLDGDGYLNMGTNYGSYYSGLSLGHRGPQLSDEDARLYI
YDDLGVSQRWANKFSEAGIETVADLVGHTEEDLLRIEGIGVKAIEELKEGLDAHELTHVI
EDDLAATSDDMSQLLDMVFSPDDTILIGGDEPPTFNTEGEDMLGEALPPRSYQRNLEELD
ALLGSVGSLGFGLTSKDEEEASNADDDVEE
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggaattcgacgtaagcaatttcgatgccctgcgcatttcgctcgccaacgcc
gaggacgtgcgcagctggtcgcgcggcgaggtgaagaagcccgagacgatcaactaccgc
acgctcaagcccgagaaggacggcctgttctgcgagaagatcttcggcccgacgaaggac
tgggagtgcgcctgcggcaagtacaagcgcgtgcgcttcaagggcatcgtctgcgagcgc
tgcggcgtcgaggtgacgcgcagcaaggttcgccgcgagcgcatgggacacatcgagctg
gccgccccggtcagccatatctggtacttcaagggctcgccttcgcgcctgggctacctc
ctggacatcgcgccgaaggagctcgagaaggtgctgtacttcgcgtcctccatcatcacg
tcggtggacaaggaagcccgcgaggaggatgccgacgagctgcgtgacgagctggccgcc
gacctcgaggagctggacgccgagcgcgaccgcctcgtggaggccacgcgcaagctgtcc
gtggactacgtccccgaggacgacgacttcgtcgacgacgtggacgaggacgagcgcatg
acggccgaggaggtcgacgaggagatcgccgacatctacgaggagttcaacgagcgcaag
gcgctgcgtcaggacgccttcgacgccttcatgaagatcgagccgaagcagctcgtgccg
gacgaggccctctaccgcgagatgcgcctcaactaccgcgactacttcacgggcggcatg
ggcgccgagtccgtgcgcgacctgctggacgccatggacctggccgcgacggccgacgag
ctgcgcgacgtcatcgccaacggcaagggccagaagcgcgccaaggccatcaagcgcctc
aaggtggtcgacgcgttcctcaagtccgagaacaagccgacggacatgatcctcgacgtc
atcccggtgatcccgcccgacctgcgccccatggtgcagctcgacggcggccgcttcgcg
acgtcggacctcaacgacctgtaccgtcgcgtcatcaaccgcaacaaccgcctcaagcgc
ctgctggacctcggcgcgcctgagatcatcgtcaacaacgagaagcgcatgctgcaggag
gccgtcgacagcctgttcgacaacggccgccgcggccgtcccgtcacgggcccgggcaac
cgcccgctcaagtcgctgtccgacatgctcaagggcaagcaaggccgcttccgccagaac
ctgctgggcaagcgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctc
aagctgcaccagtgcggcctgccgtcgcagatggcgctcgagctgttcaagccgttcgtc
atgaagcgcctggtcgagttggagtacgccgccaacatcaaggccgccaagcgcgccgtc
gatcgcggtgccagctacgtgtgggacgtgctggaagaggtcatcaccgagcaccccgtg
ctgctgaaccgcgcccccacgctgcaccgtttgggcatccaggccttcgagccggtgctg
gtcgagggcaaggccatcaagctgcacccgctggtttgcaccgccttcaacgccgacttc
gacggcgaccagatggccgtgcacgtgccgctgggcgccgaggcgcaggccgaggcccgc
gtgctcatgctgtccgccaacaacatcaagtcgccggcccacggccgtccgctgaccgtg
cccacccaggacatgatcatcggcctgtactacctcacggccgcccgcgacggcttcgag
ggcgagggtcgcttcttcatcgacttcgacgacgccatgaacgcctacgacgcgcgcgcc
gagctggacctgcaggccaagatctgggtgcgcctctccaaggacacgcaggtggccacg
gccttcggcgtgttcgaggagcacaaggccggcgagcgcatcgagaccaccatcggccgc
atcacgttcaacaacgtgctgcccgaggactacccgtacctcaactacgagatgaacaag
aaggagatcagccgcctcgtcgaggacgtgtgcaaccgctacgagctgtccaacgtgccg
gcgatcctcgacggcctcaaggacgcgggcttccactacgccacgcgcgccggcgtcacc
gtgtcggtgtacgacgccaccgtgccgccgaacaagggcgagatcctggctgccgccgac
gagaaggtcgcggccatcgacgaggactacgagatgggcctcatgagccccgacgagcgc
cacaagcaggtcgtcgacatctggaacgccgcgaacgaggaagtcggcgaggccatggcc
gagaacttcgacaagttcaaccccatctacatgatggcgttctccggcgctcgtggtaac
atcaagcagatccgccagctggccggtatgcgaggcctcatgtccgacccgaagggcgag
atcatcgaccgcccgatcaaggcgaacttccgcgaaggcctgtccgtcctggagtacttc
atctccacgcacggcgcccgtaagggtctggccgacaccgcgctgcgtaccgccgactcg
ggttacctgacccgccgtctcgtggacgtggcccaggacgtcatcatccgcgagatcgac
tgcggcaccaccgacggcgtgccgtacccgctgcacaacgagaagggcgacgtcgacgag
aacctcatcggacgctgcctgctcgacgacgtggcgggcaccgacggcgtcgtgctgctg
ggcgcgggcgagtacatcacccatatggaccagctcaaggccatggatgccgcgggcgtc
gagacgctcgtcatccgcacggtcatgacctgccatgccgagcacggcgtgtgccagaag
tgctacggttgggatctcgccacgtcgcgtccggtgaacatcggcacggcggtgggcatc
attgccgcccagtccatcggcgagccgggcacccagctcaccatgcgcacgttccacacc
ggcggcgtcgccggcgaggacatcacccacggtcttccccgtgtccaggagctgttcgag
gcgcgcaagcccaagggcctcgccatcctcgcggagatctccggcacgctgcagatctcg
ggcgacaagcagtccaagaccatcacgatccacgaccagcagggcaacttccgcgagtac
gtcgtgtcggcgcgcgcccagatgctgcccggcgtgacggacggctgcgaagtgaaggtg
ggccagcagctcaccaagggctcggtgaacccgcacgacctgctgcgcctcaccgatccg
aacacgacgctgcgctacatcgtgagccaggtccagggcgtgtacgtgtcccagggcgtg
gacatcaacgacaagcacatcgaggtcatcgcgcgccagatgctgcgcaaggtggccgtc
atggacgccggcgagtccgactacctgccgggtcgccaggtcaaccgcttcgagttcgag
gatgctgccaacgcgctcatcgccgaaggcaaggagccgcccgtgggccagccgctgctg
ctgggcatcacgaaggcgtcgctggccacggactcgttcctgtcggccgcctcgttccag
gagaccacgaaggtgctcaccgacgccgccatcgagggcaaggtggaccatctggccggc
ctcaaggagaacgtcatcatcggcaagccgatcccggcgggcacgggcctctcgcgctac
cgcgaagtgggcctcacctacaagggtcgtccggttgcgccggtgctgggcgagacgctg
cccgacttcgcgccggaagcgctccgcgacatcgaggagctgctgccccagccgcaggat
tggtcgctcgacggcgacggctacctcaacatgggcacgaactacggcagctactacagc
ggcctgtcgctgggccatcgcggcccgcagctgtccgacgaggacgcgcgcctgtacatc
tacgacgatctgggcgtgtcgcagcgttgggccaacaagttctccgaggcgggcatcgag
acggtggccgacctcgtgggtcacaccgaggaggacctgctgcgcatcgagggcatcggc
gtgaaggccatcgaggagctgaaggaaggcctcgacgcccacgagctgacgcacgtgatc
gaggacgacctcgcggccacgagcgacgacatgagccagctgctcgacatggtgttctcg
cctgacgacaccatcctcatcggcggcgacgagcccccgaccttcaacaccgagggcgag
gacatgctgggcgaggccctgccgccgcgctcctaccagcgcaacctggaagagctcgat
gcgctgctgggctccgtgggatcgctgggcttcggtctgaccagcaaggatgaagaagaa
gcatccaacgctgacgacgacgtggaagagtag
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