Eggerthella guodeyinii: GS424_005515
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Entry
GS424_005515 CDS
T07376
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
egd
Eggerthella guodeyinii
Pathway
egd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GS424_005515 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egd03021
]
GS424_005515 (rho)
03019 Messenger RNA biogenesis [BR:
egd03019
]
GS424_005515 (rho)
Transcription machinery [BR:
egd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GS424_005515 (rho)
Messenger RNA biogenesis [BR:
egd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GS424_005515 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
SAP
Rho_N
Spore_III_AA
AAA_25
NACHT
EURL
Motif
Other DBs
NCBI-ProteinID:
QOS69305
UniProt:
A0A6L7IV10
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All DBs
Position
1368300..1369958
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AA seq
552 aa
AA seq
DB search
MSENEATSTAPAAAPAKRRSTSVNAKSASKAEGAATPGRNSSATRTPRKSVKAGGTQQQQ
QQQGSGSNNRRQNASNAGKPNNNSGGNNNRQKQGGGQNRQNNNQNQRRQRRQHDNNRGGN
REVQPSVSREELAKLKVAELREKAAELNLDVTGLKKAELVEAVFGASVKAEGFIEVSGIL
DILADGYGFLRTQGYLPSETDCYVGLSTIRRNGLRKGDLVTGQTRPARENEKYAAIQKVT
AVNGTPVEELGSRVRFGDLTPVYPDECLTMEHGKNTVTARVIDLVSPIGKGQRGLIVSPP
KAGKTTILKDIAAAISANNPEVHLMCLLVDERPEEVTDMERSIKGEVISSTFDMPTENHI
AVSELVIERAKRLVECGKDVVVLLDSLTRLARAYNLAQPASGRILSGGVDSTALYPPKRF
LGAARNIEHGGSLTILASALVDTGSKMDEVIFEEFKGTGNMELKLDRNLADRRIFPAIDP
VASGTRKEDLLLEPQEAPLIWAVRRILANTNSTERAMDMLIKSLKQTETNQEFLVRTAKK
AQHTKADGSLEF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacgaagcaacctcaacggctcccgcagccgcacccgccaagcgccgctcg
acgagcgtgaacgccaaatcggcaagcaaggcggaaggcgcggccacgccgggccgcaac
tcgtcggccacgcgcacgccgcgcaagtcggtgaaggccggcgggacgcagcagcaacag
cagcaacaaggttccggctcgaacaaccgccgccagaacgcctcgaacgcgggcaagccc
aacaacaacagcggcggcaacaacaaccgccagaagcagggcggcggccagaaccggcag
aacaacaaccagaaccagcgccgccaacgccgccagcacgacaacaaccgcggcggcaac
cgcgaagtccagcccagcgtgtcgcgcgaggagctggcgaagctcaaggtggccgagctg
cgcgagaaggccgccgagctcaacctcgacgtgacgggcctcaagaaggccgagctcgtc
gaagccgtgttcggcgccagcgtcaaggccgagggcttcatcgaggtgtcgggcatcctc
gacatcctcgccgacggctacggcttcctgcgcacgcagggctacctgcccagcgagacg
gactgctacgtgggactgtccaccatccgccgcaacggtctgcgcaagggcgacctcgtg
accggccagacgcgcccggcgcgcgagaacgagaagtacgccgccatccagaaggtgacg
gccgtcaacggcaccccggtcgaagagctgggaagccgcgtccgcttcggcgacctcacc
ccggtctacccggacgagtgcctcaccatggagcacggcaagaacaccgtcaccgcgcgc
gtcatcgacctcgtgtcgcccatcggcaagggccagcgcgggctcatcgtcagccccccg
aaggcgggcaagaccaccatcctcaaggacatcgcagccgccatcagcgcgaacaatccc
gaagtgcacctcatgtgcctgctcgtggacgagcgtcccgaggaagtcaccgacatggag
cgctccatcaagggcgaggtcatctcctcgacgttcgatatgcccaccgagaaccacatc
gccgtgtccgagctggtcatcgagcgcgcgaagcgcctcgtcgaatgcggcaaggacgtc
gtcgtgctgctcgactcgctcacgcgcctcgcgcgcgcctacaacctggcgcagccggcc
tcgggccgcatcctgtcgggcggcgtcgattccacggcgctctacccgcccaagcgcttc
ctgggcgccgcgcgcaacatcgagcacggcggcagcctcaccatcctggcctcggcgctc
gtggacacgggctcgaagatggacgaggtcattttcgaggagttcaagggcaccggcaac
atggagctcaagctcgaccgcaacctggccgaccgccgcatcttcccggccatcgacccg
gtggcttcgggcacgcgcaaggaagacctgctgctcgagccgcaggaggcgccgctcatc
tgggccgtgcgccgcatcctcgcgaacacgaacagcaccgagcgcgccatggacatgctc
atcaagtcgctcaagcagaccgagacgaaccaggagttcctcgtacgcacggcgaagaag
gcccagcacaccaaggcggacgggtcgctcgagttctag
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