Eggerthella guodeyinii: GS424_006125
Help
Entry
GS424_006125 CDS
T07376
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
egd
Eggerthella guodeyinii
Pathway
egd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GS424_006125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egd03019
]
GS424_006125
Enzymes [BR:
egd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GS424_006125
Messenger RNA biogenesis [BR:
egd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GS424_006125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SAM_LFY
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOS69419
UniProt:
A0A7M1ZY44
LinkDB
All DBs
Position
complement(1498984..1500228)
Genome browser
AA seq
414 aa
AA seq
DB search
MSSTFQDLGLSETTLSAVARMGFTVPTPVQEQAIPLVLEGRDVVAAATTGTGKTAAFALP
LFERIGRAKRPGSPRALVVSPTRELAQQIDAACLQLAKASGRRMLTVVGGMPYKGQIAKL
GRGIDVLVATPGRLYDLMERGDVKLGDVEVLVLDEADRMLDMGFWPTMKNIVAATPSSRQ
TLLFSATLDRKVMQSVASILRDPAFVEVSHKGETADTIDQFIVPVGPMKKPELLRLVLQQ
RGDKRVIVFTDTKTRAEICTGQLKRAGFRADSIHSDKTQVQRKRALEGFSKGTIDVLVAT
DVLARGIDVSNIEYVVNYDLPESPEDYVHRIGRTGRAGETGYAISFVSPEAKAQLLDIEK
LLGEHIPTLDIDGYDATEAEKALAGQFVPKTTVGSAAFSRSLRRNGAGGFGRRR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcgacgtttcaagacctcggtttgtccgagacgaccctgtccgccgtcgcgcgg
atgggattcaccgtacccacccccgtgcaggagcaggccatcccgctggttctcgaaggt
cgcgacgtcgtggccgccgcgaccaccggcaccggcaagacggcggcgttcgcgctgccc
ctgttcgagcgcatcgggcgcgccaaacgccccgggtcgccgcgggcgctcgtcgtgagc
cccacgcgcgagctcgcgcagcagatcgacgccgcctgcctgcagctggcgaaggcgtcg
gggcgccgcatgctcaccgtggtgggcggcatgccctacaagggccagatcgcgaagctc
ggccgcggcatcgacgtcctcgtcgccacgcccgggcgcctctacgacctcatggagcgc
ggcgacgtcaagctcggcgacgtggaggtgctcgtgctggacgaggccgaccgcatgctg
gacatgggcttctggcccaccatgaagaacatcgtggccgccacgccctcctcgcgccag
acgctgctgttctcggcgacgctcgaccgcaaggtcatgcagagcgtggcctccatcctg
agggaccccgcgttcgtcgaggtgtcccacaaaggcgagacggccgacaccatcgaccag
ttcatcgtccccgtcggcccgatgaagaagccggagctgctgcgcctcgtgctccaacag
cgcggcgacaagcgcgtcatcgtgttcaccgacacgaagacccgcgccgagatctgcacc
ggccagctgaagcgggccggcttccgcgcagactccatccactccgacaagacgcaggtg
cagcgcaagcgcgcgctcgagggcttcagcaaggggacgatcgacgtcctcgtggccacc
gacgtgctggcccgcggcatcgacgtgtcgaacatcgagtacgtggtgaactacgacctg
cccgagagccccgaggactacgtgcaccgcatcggccgcacggggcgcgccggcgagacc
ggctacgccatctcgtttgtcagccccgaggcgaaggcgcagctgctcgacatcgagaag
ctgctgggcgagcacatccccacgctggacatcgacggctacgacgcgacggaggcggag
aaggcgctcgcgggccagttcgtgcccaagacgacggtgggcagcgccgcgttctcgcgc
tccctgcgccgcaacggcgcgggcggcttcggcagaaggcgctag
DBGET
integrated database retrieval system
