Eggerthella guodeyinii: GS424_008400
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Entry
GS424_008400 CDS
T07376
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
egd
Eggerthella guodeyinii
Pathway
egd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GS424_008400 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egd03019
]
GS424_008400 (pnp)
03016 Transfer RNA biogenesis [BR:
egd03016
]
GS424_008400 (pnp)
Enzymes [BR:
egd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GS424_008400 (pnp)
Messenger RNA biogenesis [BR:
egd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GS424_008400 (pnp)
Transfer RNA biogenesis [BR:
egd03016
]
Prokaryotic type
tRNA degradation factors
GS424_008400 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
RNase_II_C_S1
KH-I_KHDC4-BBP
FlgM
Motif
Other DBs
NCBI-ProteinID:
QOS69841
UniProt:
A0A6L7IPZ0
LinkDB
All DBs
Position
2028145..2030382
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AA seq
745 aa
AA seq
DB search
MEKIVESFELYGKQYRLETGELAKQATGAVVVTQGDTTVLVTAVISKEEKDYDFFPLTVD
FIEKMYAVGRIPGGYLKREARPSDKGTLTARMVDRPIRPGFADGFKREVHVVCTTLVVDS
INPPDTVCVMGASAALMLGAAPFDGPAACVRIGRDVETGEFIVNPTFEESENSDLELTIA
GTADYISMVEAGADEISEEDMLAAMTFGQEAIAAFCEVQQRFLERANIEPREWPIHVADP
AIAERVAPFMAEMSAALHDADKLSRMGKVEELKARIKEEQFSDEERAAWKGDIAAELKKL
EKKAMRAMVIETGERADGRRPEDIRPLYIVPGYLPRVHGSGLFQRGQTQALSVCTLGMLN
EWQRLDTIDPAEGKRYMHQYNFPPYCTGETGRMGAPKRREIGHGALAERALLPVLPSEDE
FPYAIRVVSEVLESNGSSSMASTCGSTLALMDAGVPIKAPVSGIAMGLIKEGDDVVILSD
IQGIEDFLGDMDFKVCGTEKGITALQMDNKARGLSVEILARALKQASEGRAHILGAMLET
ISAPREELSEFAPRIETIHIPVDKIRDVIGSGGKVVRGIQEETGASINIEEDGTIHIAAI
EGPAGEAAKAMILGIVKEPEVGEQFDGEVVGIKDFGAFVKLTPGKDGLLHISRVANGRVG
KVEDVLNLGDVIKVEVLEVDPKTGKISLDRLDKPDAPEGSAPSGERRERSDRGDRGDRNG
GRDNRPGRSGREGNGGRTPRRRHDA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatcgtcgaatccttcgaactgtacggaaagcagtaccgtttggagactggc
gagctcgccaagcaggcgaccggcgcggtcgtcgtcacgcagggcgacacgaccgtgctc
gtcacggccgtcatctcgaaggaggagaaggactacgacttcttccccctcacggtcgac
ttcatcgagaagatgtacgcggtcggccgcatcccgggcggctacctcaagcgcgaggcg
cgtccctccgacaagggcacgctgacggcccgcatggtggaccgtcccatccgccccggc
ttcgccgacggcttcaagcgcgaggtgcacgtcgtgtgcacgacgctcgtcgtcgacagc
atcaacccgcccgacaccgtctgcgtcatgggcgccagcgcggccctcatgctgggcgcg
gctcccttcgacggccccgccgcctgcgtgcgcatcggccgcgacgtcgagacgggcgag
ttcatcgtgaaccccacgttcgaggagtccgagaactcggacctcgagctgaccatcgcc
ggcacggccgactacatctccatggtggaggcgggcgccgacgagatctccgaagaggac
atgctggccgccatgacgttcggccaggaggccatcgccgcgttctgcgaggtccagcag
cgcttcctcgagcgcgcgaacatcgagccccgcgagtggcccatccacgtcgccgacccg
gccatcgccgagcgcgtcgcgccgttcatggccgagatgtccgccgcgctgcacgatgcc
gacaagctgtcgcgcatgggcaaggtcgaggagctcaaggcccgcatcaaggaggagcag
ttctccgacgaggagcgcgccgcctggaagggcgacatcgccgccgagctcaagaagctc
gagaagaaggccatgcgcgccatggtcatcgagacgggcgagcgcgccgacggccgccgt
ccggaggacatccgcccgctgtacatcgtgccgggctacctgccccgcgtgcacggctcg
ggcctgttccagcgcggccagacgcaggcgctctccgtctgcacgctcggcatgctgaac
gaatggcagcgcctcgacaccatcgaccccgccgagggcaagcgctacatgcaccagtac
aacttcccgccgtactgcacgggcgagaccggccgcatgggcgccccgaagcgccgcgag
atcggccacggcgccctcgccgagcgcgcgctgctcccggtgctgccgagcgaggacgag
ttcccctacgccatccgcgtggtgtccgaggtcctcgagtcgaacggctcgtcgtccatg
gcctccacctgcggctccacgctggccctcatggacgccggcgtgcccatcaaggcgccc
gtgtcgggcatcgccatgggcctcatcaaggagggcgacgacgtggtcatcctctccgac
atccagggcatcgaggacttcctcggcgacatggacttcaaggtgtgcggcacggagaag
ggcatcaccgccctgcagatggacaacaaggcccgcggcctgtccgtcgagatcctcgcc
cgcgcgctcaagcaggccagcgaaggccgcgcccacatcctcggcgccatgctggagacc
atctccgcgccgcgcgaggagctctccgagttcgcgccgcgcatcgagaccatccacatc
ccggtggacaagatccgcgacgtcatcggctcgggcggcaaggtcgtccgcggcatccag
gaggagacgggcgccagcatcaacatcgaggaagacggcaccatccacatcgccgccatc
gagggcccggccggcgaggccgcgaaggccatgatcctcggcatcgtgaaggagcccgag
gtgggcgagcagttcgacggcgaggtcgtgggcatcaaggacttcggcgcgttcgtcaag
ctgacccccggcaaggacggcctgctgcacatctcccgcgtggccaacggccgcgtcggc
aaggtggaggacgtgctgaacctcggcgacgtcatcaaggtggaagtgctcgaggtggac
ccgaagacgggcaagatctcgctcgaccgcctcgacaagcccgacgctcccgaaggctcc
gcccccagcggcgagcgtcgcgagcgcagcgaccgcggggatcgcggcgaccgcaacggc
ggccgcgacaaccgtccgggccgcagcgggcgcgagggcaacggcggccgcacgccgcgc
cgtcgccacgacgcgtag
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