Eggerthella guodeyinii: GS424_008415
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Entry
GS424_008415 CDS
T07376
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
egd
Eggerthella guodeyinii
Pathway
egd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GS424_008415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egd03019
]
GS424_008415
Messenger RNA biogenesis [BR:
egd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GS424_008415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
RMMBL
RNase_J_C
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QOS69844
UniProt:
A0A6L7IQA1
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All DBs
Position
2032537..2034492
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AA seq
651 aa
AA seq
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MEEKNPRAQRGSDRARTENRTGGTPRKGEKAPRANGGGESGQNAGQNGQNNKKTRTYKHV
QLEHKRPQLTKGEQASQGGQRPADRNDQSARRSFASPKKDPNATLKIIPLGGLDAIGKNM
TAFECKGDMILDDAGLMFPDDNHPGVDLILPDYTYVLENADKLRGIIITHGHEDHTGTLP
YLMKDLDRNVPIYGTKMTLGLIEGKFAEHKIKNAKLVEIKPGDQIKLGCFTAEFFAVNHS
IPGAVGVFFQSPAGNVLHTGDFKLDQTPIDGVNTDFGALSKFSEIGVDLMMSDSTNAQNP
NFTPSEAEVGKELAKIIAQAKGRVIIASFASHIHRMQQICDAAVANGRKVVVTGRSMIQN
TDIARRLGYLSISDTDLIDAYDLKGIPPEQVVIMCTGSQGEPLSALARIANGEHRTITMD
EGDTVIVSATPVPGNEKAVTRVINGLAKIGADVYDKNRARVHVSGHAGAEELKLVLSIVK
PKAFMPVHGEATHLRAHARLAEATGVPADNVFICENGESLELTSNGVVRGETVQSGIVFV
DGLSVGDTSQGVLDERNALGSQGFAAIAAAVSPKGKNVVGSVQIEMHGITGGDDDFLVRD
AQNTVKSALGRAMGKGGGQKEWKKAGRDALLSLLWERTKTRPMVIVNLLEV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaagaacccgcgcgctcagcgcggaagcgatcgcgcacgcacggagaaccgc
accggcgggaccccgcgcaagggtgagaaagcgccccgcgcgaacggtggcggcgaaagc
ggccagaacgccggccagaacggccagaacaacaagaagacgcgcacgtacaagcacgtg
cagctcgagcacaagcgcccgcagctgacgaagggcgagcaggcctcccaggggggccag
cgcccggcggaccgcaacgaccagagcgcgcggcgcagcttcgcctcgccgaagaaggat
ccgaacgccacgctcaagatcatcccgctcggcggcctcgacgccatcggcaagaacatg
acggccttcgagtgcaagggcgacatgatcctcgacgacgccggcctcatgttccccgac
gacaaccatccgggcgtcgacctcatcctgcccgactacacttacgtgctcgagaacgcc
gacaagctgcgcggcatcatcatcacgcacggccacgaggaccacaccggcacgctgccg
tacctcatgaaggacctcgaccgcaacgtgcccatctacggcacgaagatgacgctcggc
ctcatcgagggcaagttcgccgagcacaagatcaagaacgccaagctcgtggagatcaag
cccggcgaccagatcaagctgggctgcttcacggccgagttcttcgccgtgaaccactcc
atcccgggcgccgtgggcgtgttcttccagagcccggccggcaacgtcctgcacacgggc
gacttcaagctggaccagacgcccatcgacggcgtgaacaccgacttcggcgcgctgtcg
aagttcagcgagatcggcgtcgacctcatgatgagcgactccacgaacgcgcagaacccc
aacttcacgccgtcggaggccgaggtgggcaaggagctggcgaagatcatcgcgcaggcg
aaggggcgcgtcatcatcgcgtcgttcgccagccacatccaccgcatgcagcagatctgc
gacgcggcggtggccaacggccgcaaggtggtggtcacgggccgctcgatgatccagaac
accgacatcgcgcgacgcctgggctacctcagcatcagcgacaccgacctcatcgacgcc
tacgacctcaagggcatcccgcccgagcaggtggtcatcatgtgcacgggcagccagggc
gagccgctctcggcgctggcccgcatcgccaacggcgagcaccgcaccatcaccatggac
gagggcgacacggtcatcgtgtcggccacgccggtgccgggcaacgagaaggcggtcaca
cgcgtcatcaacggcctggcgaagatcggcgcggacgtgtacgacaagaaccgcgcccgc
gtgcacgtgtcgggccatgccggcgccgaggagctcaagctggtgctgagcatcgtgaag
cccaaggcgttcatgccggtgcacggcgaggcgacgcacctgcgcgcccacgcccgcctg
gccgaggccacgggagtgccggccgacaacgtgttcatctgcgagaacggcgagagcctc
gagctgacgtcgaacggcgtcgtccgcggcgagaccgtgcagagcggcatcgtgttcgtg
gacggcctgtcggtgggcgacacgtcgcagggcgtgctggacgagcgcaacgcgctgggc
tcgcagggcttcgcggccatcgccgccgcggtgtcgccgaagggcaagaacgtggtgggc
agcgtgcagatcgagatgcacggcatcacgggcggcgacgacgacttcctcgtgcgcgac
gcgcagaacaccgtgaagagcgccctcgggcgcgccatgggcaagggcggcggccagaag
gagtggaagaaggccgggcgcgatgccctgctgtcgctgctgtgggagcgcacgaaaacc
cgccccatggtgattgtgaacttgctcgaggtttaa
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