Eggerthella guodeyinii: GS424_014050
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Entry
GS424_014050 CDS
T07376
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
egd
Eggerthella guodeyinii
Pathway
egd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GS424_014050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egd03019
]
GS424_014050
Enzymes [BR:
egd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GS424_014050
Messenger RNA biogenesis [BR:
egd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GS424_014050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SNF2-rel_dom
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOS67619
UniProt:
A0A6L7INA6
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All DBs
Position
3292774..3294315
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AA seq
513 aa
AA seq
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MQNFADLGLSEAALAAVERLGYENPTPVQLQAIPLVLEGRDLIAAASTGTGKTAAFLLPI
LSTLPRGKKGKRAPRVLVVSPTRELAQQISQTCMQITRKTGHYVTTVFGGTPYGPQINEI
RRGTDVLIATPGRLNDLMNKGVIDLGSIEALVLDEADRMLDMGFLPAVTTIVDATPDNRQ
TLLFSATIDQSIQKNLGSLLNDPAIVEIARNGETAKNVEQFMMPIANFKKQELLEAVLEE
KGSDRIIVFARTKNRTEDCSEALCDAGYRAESIHSDKSQGQRKRALDNFRRGRTSILVAT
DVLARGIDVPDVDHVINFDLPDMPEDYVHRIGRTGRAGEQGYAISFVTRESRRTMGDIER
LIGKDIPLMELETYELNMADIEKGKKSGGPRKGGYKGAKGSGSGRPARSGDRRERPAGAK
HEGKHGGEKREFETRSDNRPGRGKRAEGKRSFEKADGPRSTNMDHAKRRLELNEKKKHAK
AGQGERGAAKQGGSKKKTGVGGYNFSKFASKND
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatttcgccgacctcggcttgtccgaggctgcccttgccgccgtcgagcgtctg
ggctacgagaaccccacccccgtacagctgcaggccatcccgttggtcttggaaggccgc
gacctcatcgccgccgccagcaccggcaccggcaagaccgccgcgttcctgctgcccatc
ctgagcacgctgccgcgcggcaagaagggcaagcgcgccccgcgcgtgctggtggtcagc
cccacgcgcgagctggctcagcagatctcgcagacgtgcatgcagatcacccgcaagacg
ggccattacgtgaccaccgtgttcggcggcacgccctacggcccccagatcaacgagatc
cgccgcggcaccgacgtgctcatcgccacgcccggccgcttgaacgacctgatgaacaaa
ggcgtcatcgacctcggcagcatcgaggccctcgtgctcgacgaggccgaccgcatgctg
gacatgggctttttgcccgccgtcaccaccatcgtggacgcgacgcccgacaaccgccag
acgctgctgttctcggccaccatcgaccagtccatccagaagaacctcggttcgctgctg
aacgacccggccatcgtggagatcgcccgcaacggcgagaccgcgaagaacgtcgagcag
ttcatgatgcccatcgcgaacttcaagaagcaggagctgctggaagccgtgctggaggag
aagggctccgaccgcatcatcgtgttcgcgcgcacgaagaaccgcaccgaggattgctcc
gaggcgctgtgcgacgccgggtaccgcgccgagtccatccactcggacaagtcgcagggc
cagcgcaagcgcgcgctcgacaacttccgtcgtggccgcacgtccatcctcgtggccacc
gacgtgctggcgcgcggcatcgacgtgcccgacgtggaccacgtcatcaacttcgacctg
cccgacatgcccgaggactacgtgcaccgcatcggccgcacgggccgtgccggcgagcag
ggctacgccatctcgttcgtcacgcgcgagtcgcgccgcacgatgggcgacatcgagagg
ctcatcggcaaggacatcccgctcatggagttggagacgtacgagctgaacatggccgac
atcgagaagggcaagaagagcggcggcccgcgcaagggcggctacaagggtgccaagggc
tccggctccgggcgtcccgcgcgcagcggcgaccgtcgtgagcgtccggcgggcgccaag
cacgagggcaagcacggcggcgagaagcgcgagttcgagacccgctccgacaaccgcccc
ggtcgcggcaagcgcgccgaaggcaagcgctccttcgagaaggccgacggcccgcgcagc
accaacatggaccatgcgaagcgtcgcctcgagctgaacgagaagaagaagcacgcgaag
gcgggccagggcgagcggggcgcggccaagcagggcggctccaagaagaagaccggcgtc
ggcggctacaacttcagcaagttcgccagcaagaacgactaa
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