Duffyella gerundensis: EM595_0069
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Entry
EM595_0069 CDS
T04258
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
ege
Duffyella gerundensis
Pathway
ege00540
Lipopolysaccharide biosynthesis
ege01100
Metabolic pathways
Module
ege_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EM595_0069 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ege01005
]
EM595_0069 (kdtA)
Enzymes [BR:
ege01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
EM595_0069 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
EM595_0069 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
EM595_0069 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
EM595_0069 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
ege01005
]
Lipid A
EM595_0069 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
CUU22306
UniProt:
A0A0U5GHI8
LinkDB
All DBs
Position
1:complement(72977..74251)
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AA seq
424 aa
AA seq
DB search
MTTIYTALLYLIQPLIWLRLWLRGRKAPAYRQRWAERYGYCTGKVKPGGILLHSVSVGET
LAAVPLVRALRHRYPTLPITVTTMTPTGSERAQSAFGKDVHHVYLPYDLPGAINRFLNVV
DPKLVIIMETELWPNIITALHQRHIPLVIANARLSARSAKGYKKLGKFMAQLLQRITLIA
AQNEEDGERFVDLGLKRTQLTITGSLKFDISVTPELAARALTLRRQWASRRPVWIATSTH
EGEESLILDAHRRLLARFPDLLLILVPRHPERFDVARDMTQKRGFSYILRSSGEIPSGST
QVVIGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICAK
LQESDALITVTDVISLDKEIGNLLSDDDYRRYYGRHAVEVLHQNQGALQRVLQLLEPYLP
PRNH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaatttataccgccctgctctatctcattcagcccctgatctggctgcgcctg
tggctgcgcggtcgcaaagcgcctgcctatcgccagcgctgggcagaacgttacggttac
tgtacgggcaaggtcaaacccggcggtattctgctgcactctgtttcggtaggcgaaacg
ctggcggccgttccgctggttcgcgctttgcggcatcgctatcctacgctgccgatcacc
gtgacaaccatgaccccgaccggctcagaacgtgcgcagtctgcctttggcaaagatgtt
catcatgtctatctgccttatgatttgccgggcgccattaaccgttttctgaacgtggtc
gatcctaagctggtgatcatcatggaaaccgagctgtggccaaacatcatcaccgcgctg
catcagcgccatattccgctggtgattgccaatgcgcgcctctcggcccgctctgccaaa
ggctataaaaagctgggcaaatttatggcgcagctgctgcaacgcattacgctgattgcc
gcgcagaacgaggaagatggcgaacggtttgttgaccttggcctgaaacgcacccagctg
accatcaccggcagcctgaaatttgatatttcggtgacgccggaactggcagcacgtgcg
ctgaccctgcgtcgccagtgggcttcgcgtcggccagtgtggatcgccaccagcacgcac
gaaggcgaagagagcctgatccttgatgcgcatcgccgcctgctggcgcgcttcccagac
ctgctgttgattctggtgccgcggcatcctgaacgtttcgacgtggcgcgtgacatgacg
caaaaacgcggcttcagttacattctgcgcagcagcggtgaaattccttccggcagcacg
caggtcgtaattggcgacaccatgggcgaactgatgctgctgtatggcattgccgatctc
gcctttgtcggcggcagcctggtggagcgcggcggccataatccactggaagcagcggcg
cacgccattccggtgctgatgggcccgcacacctttaacttcaaagatatctgcgccaag
ctgcaggaatcagatgcgctgatcaccgttaccgacgttatctcactcgataaagagatc
ggtaatctgctcagcgacgatgattatcgccgctactacggccgtcacgccgtggaagtg
ctgcatcagaatcagggcgcgcttcagcgcgtattgcagctgctggaaccttacttaccg
ccacggaatcactaa
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