Duffyella gerundensis: EM595_0285
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Entry
EM595_0285 CDS
T04258
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
ege
Duffyella gerundensis
Pathway
ege02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EM595_0285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_5
Big_9
Motif
Other DBs
NCBI-ProteinID:
CUU22522
UniProt:
A0A0U5KWS1
LinkDB
All DBs
Position
1:complement(318084..325790)
Genome browser
AA seq
2568 aa
AA seq
DB search
MKDSTHITDTAHDADARSGLFTSPVITEIYNDSGTAIGPVIPGRVTDDPMPRFTGTAAPG
SLVEIFSWSTKLGEGYADENGRFSFVSTTPFAAGGQLISAKSTQSNGDEARSEVISLSFL
PLKHPVDPDQPVNLEPTISRPVIEGIYDNRSGEKLIENGFTVDKTPLLKGTADPLAIVYV
TNFFGQPVGSIQASAEGEWELEVDINRGSPFKAIAVDAENPANVSYRSELVHLRLQSESA
PLIESVYDNVGATGYVDQDGVTDDPQPVISGTADPHSLVEIFLSGTSVLLGQGYADKNGH
FSFTITEPLASGSNTFYAISSFDGVSSPPSDPFSLTYTPQSELPDTFIPPYALQAAIDEP
ANDVIGNDGTTTDVTPTLTGKANAFATVIIRINDIVVDEVVANKDGIWIFEPKAPLSPGL
NIFSFAAMNNGVEQISEASFTLNIALRVSVTYADDNVGLDIGELSAGQSTDDSQPTLHGA
GTPNAIVLIRTERGLLGSVQVNENGEWSFTPESPLAPGVHRFRPIITHPDSDQPVSGDYF
ALTITTPVSMTPEILYARDDQGYSSWLDSGDTTDDATPTFTGYVDAPGRMVMVRDGGNVI
GSIKVDPFGDWIYTPEPALETGSHSLTFEIVDLQGKVHASEPFVLQVVLPTDTKILYADD
NVGSVTDALSNGGRTDDTTPTLHGSGTPNSTVNIYYKGRLYLGSAEINADGKWSFTPSSP
LPAGSYDFTAREVNGSGQEQPASPNFSLTIAPPIEYFAPTISNVYDNVLTQKYLSNGSIT
DDTTPRFSGRGTPNSTIEVRDNDKVIAEVPVDRYGNWSWTATQPLETGDYRFSFVTVGED
GREYASADFNLEIITQVGGRITSAEDNVGAVTDPLSSGSRTDDTTPTLNGVGTPDGIVRI
YDNNRLIGSAKINESGEWSFTPSSALAAGAHNFYAKVTGPDGTVLANSPNFALTIAPPIE
YFAPTISNVYDNVLTQKYLSNGSITDDTTPRFSGRGTPNSTIEVRDNDKVIAEVPVNSSG
NWSWTATQPLEAGDYRFSFVTVGEDGQEYASADFNLEIISQVTGRITSAEDNVGAVTDAL
SSGGRTDDTTPTLNGVGTPDGIVRIYDNNRLIGSAKINESGEWSFTPSSALAAGAHNFYA
KVTGPDGTVLANSPNFALTIAPPVSYTAPTISNVYDNVLTQKYLSNGSITDDTTPRFSGR
GTPNSTIEVRDNDKVIAEVPVDRYGNWSWTATQPLEAGDYRFSFVTVGEDGQEYASADFN
LEIISQVTGRIDSADDNVGAVTDPLSSGSRTDDTTPTLNGVGTPDGKVEIYNGYSRIGTA
DINADGTWSWTPAGALQDGNYSFRATVIGPDGTRLPQSPAFNLIIAKPVEYVAPTVSNVY
DNVLTQKYLSNGSITDDTTPRFAGRGTPNSKIEIRDNDQKIAEVYVDHYGNWIWTSTQGL
EPGNHRFSFVAIDEAGREFASNDFSLQIISHVNGRITSAEDNVGSVTDPLGNGARTDDAT
PTLKGVGTPGGKVDIYNGYSIIGRADINADGNWSWTPPAALQDGNYSFRATVISPDGTRL
SQSPAFNLIIAKPVEYVAPTVSNVYDNVLAQKYLSNGSITDDTTPRFAGRGTPNSKIEIR
DNDQKIAEVYVDHYGNWIWTSTQGLEPGNHRFSFVAIDEAGREFASNDFSLQIISHVNGR
ITSAEDNVGSVTDPLGNGARTDDATPTLKGVGTPGGKVDIYNGYSIIGRADINADGNWSW
TPPAALQDGNYSFRATVISPDGTRLSQSPAFNLIIAKPVEYAAPTISSAYDNMLMQKYLS
SGSITDDTTPRFTGRGTPNSKIEVRDNDQKIAEVYVDRYGNWSWMPTQTQALEPGNHRFN
FVVTGEDGREFASNDFSLQIITHVAGRINFAEDNVGEITDPLTSGARTDDTTPTLKGVGT
PGGKVDIYDSYGYHGTANINDNGEWSWTPSRGLLEGSYNFRAIVISPDGTRLAQSPTFNL
VITKPVVYFAPVIENVLDNVGNVVSLSHGATTDDTTPTFSGRGVANSKITVYINEEAVGD
IHVNAQGNWSYTPSPALEKGEYTFNFVTIDNKGVEHPSKGLTLQIEPPVPVRILFADDDV
GANTDPLYDGSRTDDAQPTLHGTGTPNGFVIVINAQGLVGTATIRPDGTWSVTPENPLEI
GRHALMALVTDPDGYTHPPTAPFDLIITEPNDFQAPNILYAIDSEGDQQLLPSGAISDDT
TPTLRGEGQPGSTVVIRNLVTGEEAKVQVNGEGFWVWTPLASLSEREHFFTVAGIDENGK
EHSLSDGSLFALQIVYPGDNRIISATDDVGSTESLLAGAQTDDAKPTLHGFGVPDGIVWI
YDNDKLLGSETINGKGEWSFTPEQPLEMGIHHFSAKSSATTDKIMTPASPTFALEIVPVT
GEPEPVEPEQLPPPVILAAYDNRDGERLIGEGEPSGDATPLLKGTATPFTLVTVNVPGHS
FGTAIVDKDGNWELELKGSIGQAPLFAVAIDPKNLDVLPSAESEVFNLNIEWDQQEPLTM
RSLLQDADAPLFAEAEPVISATPPVEPTAFVPVSAPLLQTEEIAPTLY
NT seq
7707 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactcaacccacattactgacacagcgcacgacgccgatgcacgcagtggcctg
tttacctcaccggtgattaccgaaatctacaatgactccggcaccgccattggcccggtc
attccgggcagagtaaccgatgacccaatgccacggttcaccggcaccgccgcaccgggc
agcctggtcgaaattttttcctggagcacaaagctgggcgaaggctacgctgacgaaaat
ggccggtttagctttgtcagcaccacgccattcgctgccggtggtcagttgatttctgct
aaatcgacgcagagcaacggagacgaagcgcgctcagaagtcatctctcttagtttcctg
ccgcttaagcatccagtcgatcccgatcagccggtaaacctcgaacccacgatttccaga
ccggtaattgaaggcatttacgataaccgcagcggcgaaaagctgattgaaaatggcttt
accgtcgacaaaacgccgctactgaaaggcacggccgatccgctggcgattgtctacgta
accaacttttttgggcagcctgtgggcagcattcaggccagtgctgagggcgaatgggag
ctggaagtcgacatcaatcgtggcagcccgttcaaggcgattgcggttgatgcggaaaat
ccagctaacgtcagctacagaagcgaactcgttcacctccggcttcagtcagaaagtgcg
ccgttgattgaatcggtttacgacaatgttggcgcaacaggctacgttgaccaggatgga
gttactgatgatccgcagcccgtcattagcggcacagccgatcctcacagcctggtagaa
attttcctgtcaggcacgtccgtgctacttggtcagggttacgccgacaagaacgggcac
ttcagctttaccattaccgaaccgctggcgtcgggttcaaatacgttttacgccatcagt
tccttcgatggtgtcagcagccctccttctgacccgtttagcctgacctacacaccgcaa
tcagaactaccggatacgttcattccgccgtatgcgctgcaagccgcgattgatgagcca
gctaacgacgtgattggtaacgacggcaccaccaccgacgtcacgccaacgctaaccggt
aaggccaacgctttcgccacggtgattattcgcatcaatgacatcgtggttgatgaagtg
gtggccaataaagatggcatctggatctttgagccgaaagcaccgctgtcgccaggccta
aacatcttttcctttgccgccatgaacaatggcgttgagcagatttctgaagcaagcttt
acgctcaacattgccctcagggtcagcgtcacctatgccgacgataacgtgggtcttgat
atcggcgagctgtcagcaggccagagtaccgatgacagccagccgacgctgcatggtgca
ggcacaccaaacgccattgtgctgattcgcaccgaacgtggcctgctgggttccgttcag
gtcaatgaaaacggcgaatggagctttacgccagagtcaccgctggcaccgggcgtgcac
cgcttccgcccgattattacgcatcctgattctgaccagcctgtctctggcgactacttt
gccctcactatcaccacaccggtctcgatgacgccggaaattctttatgctcgcgacgat
cagggatacagcagctggctggacagcggtgacaccaccgatgacgccacgccaactttc
accggctatgttgatgcccctggcagaatggtgatggtgcgcgacggcggcaacgtcatc
ggtagtatcaaggtcgatccattcggcgactggatctatacgcccgagcctgcactggaa
accggcagccacagcctgacctttgaaattgttgatctccagggcaaggtacacgccagc
gagcctttcgtgctacaggttgtgttgccgacagacaccaaaatcctctatgccgatgat
aacgttggcagcgtcaccgatgcgctgagcaacggtggccgtaccgatgacaccacgcca
acgctgcacggcagcggcacgccaaacagcacggtgaatatttactataaaggccgcctc
tatctcggttcggcagaaatcaacgccgacggtaagtggagctttaccccctcctcgccg
ttgccagcgggctcgtatgactttaccgcgcgcgaagtgaatggcagcggtcaggaacag
ccagccagcccgaatttctccctgaccattgcaccgccgattgagtacttcgcgccgacc
atcagcaacgtttacgacaacgtgctgacgcagaaatacctgagcaacggcagcatcacc
gatgacaccaccccgcgcttttctggccgcggcacgccgaacagcactatcgaagtgcgc
gataacgacaaggtcatcgccgaggtgccggtcgatcgctatggcaactggagctggacc
gcaacccagccgctggagaccggtgattaccgcttcagctttgtcaccgtgggcgaggat
ggccgcgagtacgccagcgccgatttcaaccttgagatcatcacccaggtgggtggccgc
attacttctgccgaagacaatgttggcgccgtcaccgatccgctgagcagtggctcacgc
accgacgacaccacgccaaccctgaacggcgtcggcacgccggacggcatcgtccggatt
tacgacaacaaccgtctgatcggctcggcgaaaatcaatgagagcggcgaatggagcttc
acgccgtcctccgcgctggccgcgggcgcacacaatttctacgccaaagtcaccggcccg
gatggcaccgtgctggccaacagcccgaatttcgcgctgaccattgcaccgccgattgag
tacttcgcgccgaccatcagcaacgtttacgacaacgtgctgacgcagaagtacctgagc
aacggcagcatcaccgatgacaccaccccgcgcttttctggccgcggcacgccgaacagc
actatcgaagtgcgcgataacgacaaggttatcgccgaggtgccggtcaacagcagcggc
aactggagctggaccgcaacccagccgctggaagccggcgattaccgcttcagctttgtc
accgtgggcgaggatggccaggagtacgccagcgccgactttaaccttgagatcatcagc
caggttacgggccgcattacttctgccgaagacaatgttggtgccgtcaccgatgcgctg
agcagcggcggacgcaccgatgacaccacgccaaccctgaacggcgtcggcacgccggac
ggcatcgtccggatttacgacaacaaccgtctgatcggctcggcgaaaatcaatgagagc
ggcgaatggagcttcacgccgtcctccgcgctggccgcgggcgcacacaatttctacgcc
aaagtcaccggcccggatggcaccgtgctggccaacagcccgaatttcgccctgaccatc
gcgccgccggtgagctacaccgcgccgaccatcagcaacgtttacgacaacgtgctgacg
cagaagtacctgagcaacggcagcatcaccgatgacaccaccccgcgcttttctggccgc
ggcacgccgaacagcactatcgaagtgcgcgataacgacaaggtcatcgccgaggtgccg
gtcgatcgctatggcaactggagctggaccgcaacccagccgctggaagccggcgattac
cgcttcagctttgtcaccgtgggcgaggatggccaggagtacgccagcgccgactttaac
cttgagatcatcagccaggttacgggccgcatcgactctgccgatgacaacgtcggcgcg
gtcaccgatccgctgagcagtggctcacgcaccgacgacaccacgccaaccctgaacggc
gtcggcacgccggacggaaaagttgagatctacaacggctacagccgcatcggtaccgct
gatatcaacgccgacggcacctggagctggacgcctgcgggtgcattgcaggatggcaac
tacagcttccgcgccacggtgatcggcccggatggcacgcgcctgccacaaagcccggcg
ttcaacctgatcattgcgaagccggttgagtatgttgcgccaaccgtcagcaacgtttac
gacaacgtgctgacgcagaaatacctgagcaacggcagcatcaccgatgacaccaccccg
cgcttcgccggccgcggcacgccgaacagcaaaatcgagatacgcgataacgatcaaaaa
atcgctgaggtgtatgtcgatcactatggcaactggatctggacctcaactcaggggctg
gaaccgggtaaccaccgcttcagctttgtcgctatcgatgaagcaggccgcgagtttgcc
agcaacgatttctcattgcagatcattagccatgttaacggccgcattacttcggcagag
gataacgtcggttctgtcaccgatccgctgggcaacggcgcgcgtaccgatgacgccacg
ccaaccctaaaaggtgtcggcacaccgggtggcaaggtcgacatttacaatggctacagc
attattggccgggccgatatcaacgccgacggcaactggagctggacgccacctgccgct
ctgcaggatggcaactacagtttccgcgctacggtgatcagcccggatggcacgcgtctg
tcgcaaagcccggcgttcaacctgatcattgcaaagccggttgagtatgttgcgccaacc
gtcagcaacgtttacgacaacgtgctggcacaaaagtacctgagcaacggcagcattacc
gatgacaccacgccgcgcttcgccggccgcggcacgccgaacagcaaaatcgagatacgc
gataacgatcaaaaaatcgctgaggtgtatgtcgatcactatggcaactggatctggacc
tcaactcaggggctggaaccgggtaaccaccgcttcagctttgtcgctatcgatgaagca
ggccgcgagtttgccagcaacgatttctcattgcagatcattagccatgttaacggccgc
attacttcggcagaggataacgtcggttctgtcaccgatccgctgggcaacggcgcgcgt
accgatgacgctacgccaaccctaaaaggtgtcggcacaccgggtggcaaggtcgacatt
tacaatggctacagcattattggccgggccgatatcaacgccgacggcaactggagctgg
acgccacctgccgctctgcaggatggtaactacagtttccgcgctacggtgatcagcccg
gatggcacgcgtctgtcgcaaagcccggcgttcaacctgatcattgcaaagccggttgag
tatgccgcaccaactattagcagtgcctacgacaacatgctgatgcagaaatacctgagc
agcggcagcatcaccgatgacaccaccccacgcttcaccggacgtggtacgccgaacagc
aaaatcgaggtacgcgacaacgatcaaaaaatcgctgaggtgtatgtcgatcgctacggc
aactggagctggatgccaacgcagacgcaggcactggaaccgggtaaccaccgcttcaac
ttcgtcgtgaccggcgaagatggccgcgagtttgccagcaacgacttctcattgcagatc
atcactcacgttgccggacgcattaattttgctgaagacaacgtcggcgagattaccgat
ccgctgaccagcggcgcgcgcaccgacgacaccacgccaaccctgaaaggtgtgggcacg
ccgggcggtaaagtcgatatttacgacagctatggctatcacggtaccgctaacattaat
gacaacggcgagtggagctggacgccatcacgcggcctgttagaaggatcgtacaacttc
cgcgccatcgtgatcagcccggatggcacccgtctggcgcaaagcccaacctttaatctg
gtgatcactaaaccagtggtctatttcgcaccggttatcgaaaatgtcctggataacgtc
ggcaacgtcgtctcgctttcgcacggtgcgaccaccgacgacaccacgccaacctttagc
ggcagaggcgtggcaaacagcaaaatcacggtttatatcaatgaagaggccgtgggcgat
atccatgtgaacgcacagggaaactggtcctatacgccttctccggcactggaaaaaggc
gaatacaccttcaattttgtcaccatagacaataaaggtgttgagcatccatccaaaggt
ttaacgttgcagattgaaccgccggttccggtgcgtattctctttgctgatgacgatgtc
ggtgccaataccgatccgctttatgatggcagccgcaccgatgacgcgcagcccacgcta
cacggcaccggtacaccaaacggttttgtgattgttattaacgctcagggtctggtgggc
acagccactatccgtcctgacggtacctggagcgtgacgccagaaaacccgttggagatt
ggccgtcacgccctgatggcgctggtaaccgatccggatggttatactcatccgccaacc
gcgccgtttgacctgattatcaccgagccaaatgatttccaggcaccgaatatcctttac
gctatcgacagcgaaggcgatcagcaactactgccatctggcgccatcagtgatgacacc
acgccaacgctgcgcggcgaaggccagccgggctcaacggttgtcatccgcaatctggtg
accggcgaagaggctaaagtgcaggtgaacggcgagggcttctgggtatggacgccgcta
gcttcgctgagtgagcgtgagcatttcttcaccgttgccggcatcgatgagaacggcaaa
gagcacagcctcagcgacggtagcctgtttgcattgcagatcgtctatccaggcgacaac
cgcattatctcggccaccgatgacgttggcagtacagaaagcctgttggccggtgcgcaa
actgatgatgcgaaacccacgctgcacggctttggtgtgccagacggcattgtctggatt
tacgacaatgacaagctgctgggttcagaaaccatcaatggtaaaggcgagtggagcttt
actccggaacagccactggagatgggcatccatcatttcagtgctaaatccagtgccacg
actgataaaatcatgacacctgccagcccaaccttcgcactggagatcgtgccggtaacg
ggtgagccggagccggttgagcctgaacaactgccaccgccggtgatccttgcggcctat
gacaaccgcgatggcgagcgtctgattggcgaaggcgaaccgtccggcgatgcaacgccg
ctgctgaaaggcaccgccacgccgtttactttggtaaccgttaatgttccaggtcattcc
tttggcactgctatcgtcgataaagacggcaactgggaactggaactcaagggttcaatc
ggtcaggctcctctctttgccgtggcaattgatcctaaaaatctggatgtgctgccaagc
gctgaaagcgaagtatttaatctaaacattgaatgggatcagcaggagcctttaactatg
cgctcactgctgcaggacgctgatgcgccgctgtttgctgaggctgagccagttatcagc
gccacaccgccggtcgagccaacggcttttgtgccagtttctgcaccgctgctgcaaacc
gaggagatcgcgccgaccctctattaa
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