Duffyella gerundensis: EM595_0425
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Entry
EM595_0425 CDS
T04258
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ege03019
]
EM595_0425 (csrD)
Messenger RNA biogenesis [BR:
ege03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EM595_0425 (csrD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
CUU22662
UniProt:
A0A0U5L1G0
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All DBs
Position
1:464429..466555
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AA seq
708 aa
AA seq
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MRSSVVDSRWRVCRAVTAWHNHFSRHNLCYFVRHRHTFTTLLTRACSSDLLISAFTGTGM
RITTKLSAFITLLSALAMILMLVGCLASFLYILNQRVEQRVQTLAAEVNTAFSTQTAPQM
ASWLEKVMPPLNIEHLEIRNASQAVLTLARHQNAMLEDEPNRFRQFDVPLPLQPGMTLRV
QVLDPTRTWFQSLVGTFTLSAIAIVGLVMSMLLLLTHRWLYRQLKGMERLEQRASRVMRG
ERGSVERGSILEWPPKASAALDLLLADLRAAGEQRTRIDTLIRAFAAQDARTGLNNRLFF
DNQLATLLEDPEDVGTHGVVMMIRLPDFDTLLDDWGHQQAKDYLFDLVNMLSTFVLRYPG
ALLARYFRSDFAVLLPHRTLKEADGIAAQLIKAVDALPPTQMMDRDDMIHIGISAFRSGQ
LTQQVMENVESATRHASLQGGNGWSVGEGNTIEMGRGSVKWRTLLENTLSRGGPRLYQKP
AVLAGGKVHHREILARIFDGDKELLAAEFMPLVLQLGMAEAFDRLMVSRIIALSAIWPEE
VFALPVTSDALLQRPFQRWLKAMLLQCTKLQRKRFLFELAEADVGQHINLLQPVFRLLTG
FGCRLAVNQAGLTVVSSAYIKQFNVELIKLDPGLVRNIDRRTENQLFVQSLLEVCKDTPT
RVFATGVRTRSEWQTLSDLGVSGGQGDFFASSEPVNSNVKKYSQSYRL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcatctgttgttgatagccgctggagggtttgccgcgcggtaaccgcgtggcac
aatcatttttcacgacataatttgtgttactttgtgcgccaccggcacacctttacgaca
cttttaacgcgtgcttgcagcagcgatctgttgataagcgcgtttacaggcacagggatg
cgaataaccaccaaactatctgcgtttataacgttattaagtgcgctggcgatgattctg
atgctggtgggctgtctggcaagctttctttatatcctcaaccaacgggtggaacagcgc
gtacagacgctggccgctgaagtgaataccgctttttccacgcagaccgcaccccagatg
gctagctggctggagaaagtgatgccgccgctgaatattgaacatctggaaatccgtaat
gcctcgcaggccgtgctgacgctggcgcgccatcaaaacgccatgcttgaggacgaaccc
aaccgctttcgtcagtttgacgtcccgttgccgttgcagcccggtatgaccttgcgcgtt
caggtgctggatccgacccgcacctggtttcagtcgctggtcgggacctttacgctgagc
gctatcgccattgttggcctggtgatgtcgatgctgctgctgctgacccatcgctggctc
tatcgccagttaaaaggcatggagcgccttgagcaacgcgccagccgcgtgatgcgcggt
gagcgcggcagcgttgagcgcggctcaattctggagtggccacctaaagcgagcgccgca
ctggatctgttactggcagatttgcgcgcagcgggcgagcagcgtacccgtattgatacc
ctgattcgtgcttttgcggctcaggatgcgcgcaccggcctgaataatcgtctgtttttt
gacaatcagctggcgacgctactggaagaccctgaggatgtcggcacgcatggcgtggta
atgatgattcgcctgcccgatttcgataccttgctggacgactggggccatcagcaggcg
aaagattatctttttgacctggtcaatatgctgtcgacctttgtgctgcgctatcccggt
gcgctgctggcccgctattttcgcagtgactttgccgttttgctgccgcaccgcaccctg
aaagaggcggacggcattgcggcgcagctgatcaaagcggtggatgcactaccgcctacg
cagatgatggatcgcgatgacatgattcatatcggcatcagcgcctttcgcagcggccag
ctgacccagcaggtgatggaaaacgtggaatctgcgacccgccacgcttcgttgcaaggt
ggaaatggctggtcggtgggtgaaggcaacaccattgaaatgggacgtggcagcgtaaaa
tggcgcacgctgctggaaaatacgctcagccgcggtgggccgcggttatatcaaaagccg
gccgtactggcgggtggcaaagtgcatcatcgcgagattctggcgcgcatttttgatggc
gataaagagctgttagccgctgagtttatgccgctggtactgcaacttggcatggcggaa
gcctttgatcggctgatggtttcgcgcatcatcgcgctatcggctatctggccggaagag
gtcttcgccttgccggtcaccagcgatgcgctgctgcagcggccgtttcagcgctggctg
aaggccatgctgttgcaatgtacaaaattgcaaagaaaacgatttttatttgaacttgca
gaagccgatgttggtcaacatatcaatcttttacagccagtatttcgtttactgaccggc
ttcggttgccgactggcagttaatcaggcgggactgacggtcgttagtagtgcctatatc
aaacagtttaacgttgagctgatcaagcttgatccggggttggtcagaaacatcgatcga
cgcaccgaaaaccagctgtttgtacaaagtttgcttgaggtctgtaaagatacgccaacg
cgcgtttttgccaccggtgttcggacccgttctgaatggcaaacgctcagtgatttgggc
gtgtcgggcggacagggtgatttttttgcctcatccgagccggtaaacagcaatgtgaaa
aaatattcacagagctaccgtctttaa
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