Duffyella gerundensis: EM595_0466
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Entry
EM595_0466 CDS
T04258
Symbol
kdsD
Name
(GenBank) Arabinose 5-phosphate isomerase KdsD
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
ege
Duffyella gerundensis
Pathway
ege00541
Biosynthesis of various nucleotide sugars
ege01100
Metabolic pathways
ege01250
Biosynthesis of nucleotide sugars
Module
ege_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EM595_0466 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ege01005
]
EM595_0466 (kdsD)
Enzymes [BR:
ege01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
EM595_0466 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
ege01005
]
Lipid A
EM595_0466 (kdsD)
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
Motif
Other DBs
NCBI-ProteinID:
CUU22703
UniProt:
A0A0U5KYY3
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All DBs
Position
1:complement(509777..510763)
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AA seq
328 aa
AA seq
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MSHHSIESGFDFQQAGRDVLDIERQGLEQLDQYINEDFSRACEMMFYCQGKVVVMGMGKS
GHIGKKMAATFASTGTPAFFVHPAEASHGDLGMVSANDVVIAISNSGESNEILALIPVLK
RLHVSLICVTSRPESTMGRSADIHLCVKVPHEACPLGLAPTTSTTATLVMGDALAVALLK
ARGFTAEDFALSHPGGALGRKLLLRVSDIMHTGAEMPHVTRDASLRDALLEITRKNLGMT
VIVNDLLKIEGVFTDGDLRRVFDMGIDFQQASIAQVMTPGGIRVRPAMLAVDALNLMQSK
NITAIMVADGDQLLGVVHMHDMLRAGVV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcactctatcgaatccggcttcgactttcagcaggctggcagagacgttctc
gacattgaacgtcaggggctggagcagctcgatcaatacatcaatgaagacttttcccgt
gcctgcgaaatgatgttttattgccagggtaaagttgtggtgatgggcatggggaaatcg
gggcatatcggtaaaaaaatggcggcaacctttgccagcaccggtacacctgcgtttttc
gtgcatccggcagaggccagccatggcgatctgggcatggtcagcgccaacgacgtggtg
atcgctatctccaactccggcgaatccaatgagattttggcgctgattcctgtactgaag
cgtctgcacgtttcgctgatttgcgtcaccagccgtccggaaagcaccatgggacgcagc
gccgatattcatctctgtgtaaaagtcccgcacgaagcctgcccgctggggctggcgccg
accaccagcactaccgccacgctggtcatgggcgatgcgctggccgttgcgctattgaaa
gcgcgcggctttaccgcagaggattttgccctttcgcaccctggcggcgcgctgggccgt
aagctgctgttacgcgtcagcgatatcatgcataccggcgctgaaatgccgcacgtgacg
cgtgatgcctcgctgcgcgatgcgctgctggagatcacgcgtaaaaatctcggcatgacg
gtcatagttaatgacctgctgaaaatcgaaggcgtgtttaccgatggcgacctgcgtcgg
gtgtttgatatgggcatcgattttcagcaggcaagcattgcgcaggtgatgacgccaggc
ggcattcgcgttcgccctgctatgctggcggtagacgcacttaatttaatgcagagcaaa
aatatcaccgcgattatggtcgccgatggcgatcagctactcggggttgttcatatgcat
gacatgctgcgcgctggcgtagtgtaa
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