Duffyella gerundensis: EM595_0506
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Entry
EM595_0506 CDS
T04258
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ege03016
]
EM595_0506 (truB)
Enzymes [BR:
ege01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EM595_0506 (truB)
Transfer RNA biogenesis [BR:
ege03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EM595_0506 (truB)
Prokaryotic type
EM595_0506 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CUU22743
UniProt:
A0A0U5L2L1
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All DBs
Position
1:552678..553622
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSRYLLDSDKRYRVIARLGQRTDTSDADGIVVEERPVAFNNEQLETALESFRGESQ
QVPSMYSALKHQGRPLYEYARQGIDVPREARPIVVYELLFIRWEGEELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVTMLRRLEVATYPVSQMVTLEQLQALEKTALESDPANRDALDQL
LMPMDSPAAAFPEVNLPESSAAYFKQGMPVQAAGAPQNGLVRVTEGAMGKFIGMAEIADD
GRVAPKRLVVEYSD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggccgcgatattcacggcgttttgctgctggataagccg
cagggactctcctccaatgatgcgctgcaaaaagtgaagcgcatctttaacgccaaccga
gcgggccataccggcgcgcttgatccgcttgccaccggtatgctgccaatctgtctcggc
gaagccacgaagttttcccgctatttgctcgattctgacaaacgctatcgcgttattgct
cgtctcggtcagcgaaccgatacctctgatgcagatggcattgtggtagaggaacgtccg
gttgcgtttaataatgagcagcttgaaacggccctggaaagctttcgcggcgaaagccag
caggtgccctcaatgtattcagcattgaagcatcagggtcgcccgctttatgagtatgcg
cgtcagggcattgacgtgccgcgtgaagcgcgtccaattgtagtatacgagctactgttt
attcgttgggaaggcgaagagctggaactggaaatccactgttccaaaggcacttatatt
cgcaccattattgatgatctcggtgagaaattgggatgtggtgcgcatgtgaccatgctg
cgccgccttgaagtggccacctatccggtgagccagatggtgacgctggaacagttgcag
gccctggaaaaaaccgcgctggaatccgatcctgcaaatcgtgatgcgctcgaccagtta
ctgatgccgatggacagcccggccgcggcctttcccgaggtcaacctgccggaaagcagc
gcggcttactttaagcagggtatgccggtacaggcagctggcgcgccgcagaacggtctg
gttcgggtcactgaaggcgcgatgggaaaattcatcggtatggctgaaatagctgacgat
gggcgtgtggcgccaaaaaggctggttgttgaatattctgactga
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