Duffyella gerundensis: EM595_0549
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Entry
EM595_0549 CDS
T04258
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
ege
Duffyella gerundensis
Pathway
ege02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EM595_0549
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_9
Big_3_5
Big_3_2
Big_7
Glucodextran_B
DUF4625
Y_Y_Y
DUF2057
PUA_3
DUF2808
TcaA_3rd_4th
Gag_p12
Cadherin-like
Motif
Other DBs
NCBI-ProteinID:
CUU22786
UniProt:
A0A0U5GIT1
LinkDB
All DBs
Position
1:607834..611619
Genome browser
AA seq
1261 aa
AA seq
DB search
MSNPFNINHGTVFHTNDPFWTLPLDGQDAANGRVEVYINGKKVDFVIDENDKYVIDFNQP
LPEGKHVVTVMTFDPAGNPSPPGVFLLDVDYTPPVKPEILRVVDDSGADPYYLTSGEVTK
DGAPVLTGSGEPGTKVKLMNGTEEVGEVEVDSLGRWQFTPELKEGTNTFTVVSIDKAGNQ
SESDPFNIYLNEKPADAPEEIARQPVTQDTAPVVQEEETPVDPIPGAMAPVLSRDGVLTF
DGYLVDPQDEGALVQVVVDGVIYSTTIKDLQWSLDALQLEDGLHVVDIRYTDLAKNPGIP
TQFLFEVDKTPPEQPVILQVYDDVNGRNLSPMGSTNDTTPTLVGVSEPHSVVYVYRGDRE
LGSVEADANGRWEFDTSTVNLTGSSHQFKVKAQDKYERESIFSDTFPVNFDIAPPQKPTI
GGASDDVGTPTELVSNSRTDDDRPTFRGQAENGSLVTIYVNGEAVASTYADAMTGNWSLD
APLEAGENIVTVVAKDSAGNESEASDEFVLTLAEDPNQPLIGGLFNNDGDVPVAIANGAD
TNDKTPLLTGEGVDGDIIKVFLDGNEIGSTTVKDGEWSFELPEIDGLQDGEHALTITVTD
EFDQTSDLSEPFVFNLDTQAPDSIDIGAGTVVDDEGNPIEEGVKTGDDKPTFTGEGTDGD
LITIVDQDNNPIGSAIVSEGRWEITPEEGLDTGEYDLGIIVTDPAGNESEKSEDPFKLIV
DTTPPENLTDVVLKDNTGPITDPLTGDPALIDDPRPEFSGRGEAGSSVIIIVDGEEVGTV
QVNDDGEWSWQPADDLEEEVTHSFVAQPVDEVGNRGEATAPINIIVDTSPVSLSALVVSD
NEGIYQNDLVSGDKTDDTTPTFSGSATDGSTVFIVDKLTNTIIGSVQVNNGSWTFTPEAP
LDQGNYELEIYAQSPYGVQSAKTEFNFTVDLSTPEAPAFGTDFDIWDDVGSITGKITQGG
ETDDVRPEFKGTAEKDEVIFIYADGDTETAIASIKVDESGEWSWMPDTDLGEGEHSYQVA
IRDAAGNMGAISEAIEFTVDVQAPLNGRMEGIWTNIGGSNSSILPDPDGEGEYIAQSKDN
SPVFSGRGEIGTLVTIYDKDNGNAVASGYVQDTGRWRIETIELQDATYNFAIEFSDAAGN
TETIDVEFPVKIDTTPPGPPITAPIPETRGLFEIDEQGAALSVNDVLQQGQQDLFINSGT
TQLMVTGKSGAVLNLEDLTNDQNEWQQANGSVTVGGVEYNVFQSAGKDVELLVQQDLNTQ
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccccttcaatatcaaccacggcaccgtatttcacaccaacgatcccttctgg
accttacctctggatggccaagacgcggccaacggtagagtcgaagtctatattaacggc
aaaaaagttgattttgtcattgatgaaaacgataaatacgttatcgatttcaaccagccg
ctgccggaaggcaagcacgtcgtaacggttatgaccttcgatccggcaggtaacccaagc
ccaccgggtgttttcctgctggatgtcgattatacgccgccggttaagcctgaaattctg
cgtgtcgttgatgatagcggtgccgatccttactacctgacctctggcgaagtgaccaaa
gatggcgcgccagtactgaccggtagcggcgagccaggcaccaaagttaagctgatgaac
ggcactgaagaagtgggtgaggttgaagtcgacagcctcggacgctggcagtttacccct
gagctgaaagaaggcaccaatacctttaccgtggtgtctatcgacaaagcgggtaatcaa
agtgagtccgatccgttcaatatttacctgaacgagaagccagccgatgcgcctgaagag
atcgcgcgtcagccagtaactcaggacacggcaccagtggttcaggaagaagagacgccg
gttgatcccatccctggggcaatggcacctgtgctttcccgcgatggcgtgctgactttc
gatggttatctggtcgatcctcaggatgagggcgccctcgttcaagtggttgtcgatggc
gtgatctattcaaccaccatcaaagatcttcaatggtcgctggatgcgcttcagctggag
gatggtctgcacgttgtggacattcgttatactgacctggcgaagaacccaggcatacca
acacagttcctgtttgaggtggataaaacgccgccagagcagcctgttattctgcaggtt
tatgatgatgtaaacggtcgtaacctgtcgcctatgggttctaccaacgatactacgcct
acgcttgtcggtgtatctgaacctcattctgttgtttatgtttatcgcggcgaccgagag
ctgggttccgttgaggctgatgccaatggccgctgggaatttgacaccagcacagtaaat
ctgacgggaagcagtcaccagtttaaggttaaagcgcaagataaatatgagcgtgagagc
attttctcagataccttccctgtcaactttgatatcgctccgccgcagaaacctaccatc
ggtggtgcttctgatgacgtgggtacgcctactgaactggtcagcaattcgcgcaccgat
gacgatcgtcctaccttccgtggtcaggccgagaacggtagcctggtgacgatttatgtc
aatggtgaggcggttgccagcacctatgctgatgcaatgaccggtaactggtcactcgat
gcgccgctggaagcgggtgaaaacattgttaccgttgtggctaaagatagcgccggtaat
gaaagtgaagcctctgatgagttcgtgctgacgctggcggaagatccaaaccagccactc
atcggcggcctgtttaacaatgatggcgatgtgcctgttgctattgccaatggtgccgac
accaacgataaaaccccgctgctgaccggtgaaggtgttgatggcgatatcatcaaggtc
ttcctggatggtaacgagattggttcaaccacggtaaaagacggcgaatggtcgtttgaa
ctccctgaaattgatggcctgcaagatggtgagcatgcgctgaccatcaccgtgaccgat
gagttcgaccaaacttctgatttgtccgaacctttcgtgtttaatctggatactcaggcg
ccagatagcatcgatatcggtgccggtacggtggttgatgatgaaggtaacccgatcgaa
gagggtgtaaaaactggcgatgataagccaacctttaccggtgaaggcactgatggtgat
ctgatcaccatcgtcgatcaggataacaacccaatcggctccgctatcgtttcagaaggg
cgctgggagatcacaccagaagaaggtctggacaccggtgaatatgatcttggcatcatc
gttaccgatccggcgggcaatgaatctgaaaaatcagaagatccatttaagctgatcgtc
gataccacgccgccggaaaacctgaccgacgtggtgctgaaggacaataccggcccgatt
acagatcctcttactggcgacccagcattgatcgatgacccgcgtccggaatttagtggc
cgtggtgaggctggatccagcgtcatcattattgttgatggtgaggaagttggtaccgtc
caggtaaacgatgacggcgagtggtcatggcagcctgcagacgatctggaagaagaggta
acccacagctttgttgcccaaccggttgatgaagtgggcaaccgcggtgaggcgacggca
ccaatcaacattattgttgataccagtccggtaagcctttctgctctggttgtgagcgat
aacgaaggtatttatcagaatgacctggtcagtggcgacaaaaccgacgataccacgcca
accttctccggtagcgcgaccgatggttcaacggtgtttatcgtcgataaattgaccaat
accatcatcggcagcgtgcaggtgaataacggcagctggacatttacgccagaggcacca
ctggaccagggcaactatgaactggaaatttacgcgcagtctccttacggggtacaaagt
gcgaaaaccgagttcaacttcaccgtggatctgagcacgccagaagcacctgcttttggc
accgacttcgatatctgggatgacgtaggttcaattaccgggaagattacccagggcggc
gaaaccgacgatgtgagaccagaattcaaaggtaccgcagagaaggatgaggtgatcttt
atttacgctgacggtgacactgagactgccattgcctcaatcaaggtagacgagtcaggt
gagtggtcatggatgccggataccgacttaggtgaaggcgaacacagctatcaagtcgct
attcgcgacgcggcgggaaatatgggtgctatcagcgaagctattgagtttactgtcgat
gtgcaagctccacttaacggcagaatggagggcatttggaccaatatcggcggctcaaat
agtagtattcttccagatccggacggcgaaggagaatatattgctcaatccaaagataac
agcccggtattctccggccgaggtgaaatcggtacgttagtcaccatctacgacaaagac
aacggaaacgcggtggcttctggctacgtccaggatacaggacgctggagaattgaaacc
attgaactgcaggacgcgacgtataactttgccattgagttctccgatgcggcaggtaat
accgagacaatcgatgttgagtttccagttaagatcgatactacgccgccgggcccaccg
atcactgcgccaatcccggaaacccgcggcctgtttgagattgatgagcaaggtgcagca
ctgtcagttaatgacgtcctgcagcagggtcaacaggatctgttcatcaacagcggcacc
actcagctgatggttaccggtaagtcaggtgcagtattgaacctggaagacctgactaac
gatcagaatgagtggcagcaggctaacggcagcgtaacggtaggcggcgtggaatataac
gtcttccagagcgcgggcaaggatgtggaactgttggtacagcaggatctcaatacccag
ctgtaa
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