Duffyella gerundensis: EM595_0781
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Entry
EM595_0781 CDS
T04258
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ege
Duffyella gerundensis
Pathway
ege03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EM595_0781 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ege03019
]
EM595_0781 (pcnB)
Enzymes [BR:
ege01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EM595_0781 (pcnB)
Messenger RNA biogenesis [BR:
ege03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EM595_0781 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CUU23017
UniProt:
A0A0U5KXU4
LinkDB
All DBs
Position
1:complement(872748..874142)
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AA seq
464 aa
AA seq
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MSRDEEAPAEVEEKRLMTVIPRESHTISRKDISENALKVLYRLNKAGFEAYLVGGGVRDL
LLGQKPKDFDVTTNATPEEMRKLFRNCRLVGRRFRLAHVMFGPEVIEVATFRGHHQAEDA
VVTEVEDRNTSQRAQSGMLLRDNIFGNIEDDAQRRDLTINSLYYSVADFTVRDYVGGLSD
LQQGIVRMIGDPELRYREDPVRMLRVVRFAAKLKMSIAPETAEPIPRLASLLRDIPSARL
FEESLKLLQAGYGYDTYLLLREYQLFQPLFPTITRNFTELEDSPMERMLLQVLKNTDNRI
HNQMRVNPAFLFAAMFWYPQLETAQRIAQESGLTYYDAFALAMNDTLDEACRALAIPKRI
TTLIRDIWQLQLRISRRQGKRAWKLMEHPKFRAAYDLLALRAEVENSPELLRLTHWWGEF
QAAAPPQQKNMMNTLDDEPTARRRTRRPRKRPAGPRRDNNSTNA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgtgatgaagaggcgcccgcagaggttgaagaaaagcgtctgatgaccgtcatc
cctcgtgagagccacactatttcgcgtaaagacatcagtgaaaatgccctcaaggtgctt
tatcgcctgaacaaagcgggctttgaagcctatctggtcggcggtggcgtccgtgatttg
ctgctgggtcaaaagccgaaagacttcgatgtgaccaccaacgccacgcctgaagagatg
cgcaagctgtttcgcaactgtcggctggttggacgtcgtttccgtctggcgcacgtgatg
ttcggtccggaagtgatcgaggttgccaccttccgtggtcatcatcaggcagaagatgcc
gtggtgaccgaagtggaagatcgtaacacgtcacagcgtgcgcaaagcggcatgctgctg
cgcgataacatcttcggcaatattgaagatgacgcccagcgccgcgatctcaccatcaac
agcctttattacagcgtggcggatttcaccgtgcgcgattatgtgggcggcctgagcgat
ctgcagcagggtatcgtgcgcatgattggcgatccggaactgcgctaccgcgaagatccg
gtgcgaatgctgcgcgtggtgcgttttgcggcaaagctgaaaatgagcattgcgcctgaa
accgccgagccgattcctcgcctggcgtcgttgctgcgtgatattccttccgcgcgcctg
ttcgaagagtcgctgaagctgttgcaagctggctacggctacgacacttacctgctgctg
cgtgaatatcagctgtttcagccgctgttccctaccatcacgcgcaatttcaccgagctg
gaagatagcccgatggaacgcatgctgctgcaggtgctgaaaaataccgataaccgcatt
cataatcagatgcgcgtcaatccggcctttttgttcgcggcgatgttctggtatccgcag
ctggaaacagcacagcgcatagcgcaggaaagcggactgacctattacgacgcgtttgcg
ctggcgatgaacgatacgcttgatgaagcgtgccgtgcactggcgatccctaaacgcatc
acgaccctgattcgcgatatctggcagcttcagctgcgcatctcacgtcgtcagggcaag
cgtgcatggaagctgatggagcatccgaaattccgtgccgcttacgatctgctggccttg
cgcgccgaagtggaaaacagcccggaactgctgcgtctgacgcactggtggggtgaattc
caggccgcggcgccgccacagcagaaaaacatgatgaatacgctggatgatgagccgact
gcacgtcgtcgcacccgccgtccgcgcaaacgtcctgccggtccgcgccgcgataacaac
agcaccaacgcatga
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