Duffyella gerundensis: EM595_0933
Help
Entry
EM595_0933 CDS
T04258
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ege
Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ege03400
]
EM595_0933
DNA repair and recombination proteins [BR:
ege03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EM595_0933
Archaeal homologous recombinant proteins
EM595_0933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
nSTAND3
cobW
NTPase_1
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CUU23169
UniProt:
A0A0U5GJ43
LinkDB
All DBs
Position
1:complement(1030531..1034196)
Genome browser
AA seq
1221 aa
AA seq
DB search
MKILTLRFKNLNSLRGEWKIDFSAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LGPLSQTQNELITRDTAECLAEVEFEVKGVAWRAFWSQNRARGAVDGKLQAPRVELARCD
DNVIVADKVNDKLKMIETLSGLDFARFTKSMMLSQGQFAAFLNAKAGERAELLEELTGTE
IYGQLSIAVFERHKSARLALESLRTRASAMALLDSASVANLQQQLDVLGEQEQQLNQQIE
QLSQAQRWHEQQQQLAQDADAASQQQQQTQQHWQQLAPERERLARAAPAEALRTVWQQRQ
QVNEDLQQLEQQLSQLQQRMTQQQAEQQQLQQALALAAARRQQQYDAQLAVQHLTEQVIP
LDSQRERIDQQIAQLRTSCDDHAAGVATQQRAQREQQQTLQDLLTQQQRQQQWREAHPHL
ARWGEALPAWREQLRQLQQAEQQQAELTAALNQQQRDRQQHKQQLDALQQTMAPLLSQQQ
IAEQQAAEAERALAVLHQQHAPEQLQASSERLMQQRPARQRLALLAPQLRQLTTRQQKQQ
HSQQQLQQQQQEHEQQLALLRQRWAEKHQHLKDLRERCELEKQIADLAGYRAQLTSGAPC
PLCGACEHPAIDAYQTLTLTENQLRLQQLEQEVKQLGEEGSARKALREGVQMQQQQLTRE
QLELTQEHEQCLHQWQQLNELLALSIAPEQQAEIDAWLAQQDAEEAQLAQQQLTLQQAST
RVQQAKEHYWQVQQQCQQQQQQQQLLIQQLDNLTRSAEQAHQQQEKAQQHCAVLAEAFHA
SLAPLASPAVDQRNDWLEARQQEWQQWQESERALTELAQRLAERQQQLALLTQQLQQQEA
QLQQWQQELTSLQQQRASLQQQRQQLLGDRRVDDARQQAQQALTQAEQALNAATQQSQQA
QNQLNILDGEQRSLSAQCLTLRQRAEITAAAFREALAEQGFNDEATFQAALLDTSEAATL
RAAQQQAEQALQRASVLADRAQSALAAHQQKQPALNLPLAELTEKLAQLRQLARENAQQQ
GQSRQQLESDSKLREQQSALLTQIADEEQSLLNWGLLNELVGSGSGDKFRKFAQGLTLDH
LVWLANRQLDRLHGRYLLQRKSEEALELQVIDTWQADSARDTRTLSGGESFLVSLALALA
LSDLVSHKTRIESLFLDEGFGTLDSDTLDVALDALDALNASGKTIGVISHVEAMKERIPV
QIRVRKMNGLGYSKLDRLFSV
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattgaccctgcgttttaaaaacctcaactcactgcgcggcgaatggaaaata
gatttcagcgccgagccgtttgccagtaacggcctgtttgccattaccggccccactggc
gcgggcaaaaccaccctgctggatgccatctgcctggcgctttatcatcaaacgccgcgc
cttggcccgctatcgcagacgcagaatgaactgattacccgtgataccgccgaatgtctc
gccgaagtggaatttgaagtcaaaggcgtcgcctggcgcgccttctggagtcagaaccgc
gcgcgcggcgcggtggatggcaagctgcaggcgccgcgcgtcgagctggcgcgctgcgat
gacaatgtcatcgtggccgataaggtcaacgacaagctgaagatgatcgaaacgctctct
ggcctcgattttgctcgcttcaccaaatcgatgatgctgtcgcagggtcagtttgccgcc
tttctgaatgctaaagcgggcgaacgcgccgagctgctggaggagctgaccggcacggaa
atctatggtcagctgtcgatagcggtgtttgaacggcataaaagcgcacggctggcgctg
gaatcattacgcacgcgcgcctcggcgatggcgctgctggatagcgccagcgtggctaat
ctgcaacagcagctggatgtgctgggcgaacaggaacagcagcttaatcagcagattgag
cagctcagtcaggcgcagcgctggcatgaacagcagcagcagctggcgcaggatgccgac
gctgccagtcagcaacagcagcagacgcagcagcactggcaacagctggcgcccgagcgc
gaacgtctggcacgtgccgcaccggccgaagcattgcgcacggtgtggcaacagcgccag
caggtcaacgaggatttgcagcagcttgaacagcagctaagccaattgcagcagcgcatg
acacagcagcaagcggaacagcagcaactgcaacaggcgctggcgctggcggcggcgcgg
cgtcagcagcagtatgacgctcagttagcggttcagcatctcactgaacaggtgattccg
ctggacagccaacgagaacgcatcgatcagcagatcgcgcagctacgcaccagctgcgac
gatcatgccgctggcgtggcaacacagcagcgtgctcagcgtgagcagcagcagaccctt
caggatttactgacgcagcaacagcggcaacagcagtggcgcgaggcgcatccgcatctg
gcgcgttggggcgaagcgctgcccgcctggcgtgaacagcttcgtcagctgcagcaggcg
gaacagcaacaggcagaacttaccgccgcgctgaaccagcagcagcgcgatcgacaacaa
cacaagcagcagcttgatgccttgcagcaaacgatggcgccgctgctcagccagcagcag
atcgccgaacagcaggcagccgaggcggagcgcgcgctggcggtgctgcaccagcagcat
gcgccagagcagcttcaggccagcagcgagcggctgatgcaacagcgcccggcccggcaa
cggctggccctgctggcaccgcaactgagacagctgacaacgcgccagcagaaacagcag
cacagccagcaacagcttcagcaacagcagcaggaacatgaacaacagctggcgctgctg
cgtcagcgctgggcagaaaaacatcagcatctaaaagatctgcgtgagcgctgcgagctg
gaaaagcagattgccgatctcgccggttatcgtgcccaactaacgtctggcgcgccctgc
ccgctctgcggcgcctgtgaacatccggcgattgacgcttatcagaccttaaccctcact
gaaaaccagctgcgattgcagcagctggaacaggaagtgaagcagttgggcgaagaaggc
agtgccagaaaagcgctgcgggaaggcgtgcagatgcagcagcaacagctgacgcgcgag
cagcttgagctgacgcaggagcacgagcagtgcctgcatcagtggcagcagctaaacgaa
ttactggcgctgagcatcgcaccagaacagcaggcggagatcgacgcctggctggcgcaa
caggatgcagaagaggcgcaactggcgcagcagcagctgacactccagcaagccagcacg
cgcgtccagcaggcaaaagagcactactggcaggtgcagcagcagtgccagcagcagcaa
cagcagcagcagttgctcattcagcagctggacaacctgacgcgcagcgctgaacaggct
caccaacagcaggaaaaagcgcagcagcactgcgccgtgctggcagaggctttccacgct
tcgctggcgccgctggcatcgcctgccgttgaccagcgcaacgactggcttgaggcacgc
cagcaggagtggcaacagtggcaggaaagtgagcgcgcacttaccgagttggcccaacga
ctagctgaacgacaacagcagctggcactgttaacgcaacagctgcagcaacaggaggcg
cagctgcaacagtggcagcaggagctgacatcgctgcagcaacagcgggcaagcctgcag
cagcagcgccagcagctgcttggcgatcggcgcgtcgatgatgcgcgtcagcaggcgcaa
caggcgctaacgcaggccgaacaggcgttaaatgccgccacgcagcagagccagcaggcg
caaaatcagcttaatattcttgacggcgaacagcgttcgctttccgctcagtgcctaaca
ttacggcagcgcgccgaaatcaccgccgctgcgttccgtgaggcgctggctgaacagggc
tttaacgatgaagccacattccaggcagcgttgctggataccagcgaggccgcgacatta
cgtgcggcgcagcagcaggcggaacaggcattgcagcgcgccagcgtgctggccgatcgg
gcgcagtctgccctcgccgctcatcagcaaaagcagcccgcgcttaacctgccgctggct
gaactgaccgaaaagctggcacagctgcgccagctggcgcgagagaatgcacagcagcag
ggtcagtcgcgtcagcagctggagagcgatagcaagctgcgtgaacagcaatcggcgctg
ctgactcagattgccgacgaagagcagtcgctgcttaactggggcttgcttaacgagctg
gtcggctccggcagcggcgataagtttcgtaaattcgcgcaggggctgacgctggatcat
ctggtctggctcgctaatcgccagcttgatcggctgcatggccgctatctgttgcagcgt
aaatcggaagaggcgctggagctgcaggtgattgatacctggcaggcagacagcgcgcgc
gatacgcgcaccctgtccggcggcgaaagcttcctggtgagcctcgcgctggcgctggca
ctctccgatctggtcagccacaagacgcgtatcgaatcgctgtttctcgatgagggattt
ggcacgctcgacagcgacacgctcgatgtggcgcttgacgcgctggatgcgctcaacgcc
agcggcaaaaccatcggtgtgatcagccatgtggaggcgatgaaggaacgtattccggta
cagattcgggtgcggaaaatgaacgggctcggttacagcaagttggatcggctattttca
gtgtaa
DBGET
integrated database retrieval system
